RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 ZNF18P17022 549 aa9□□□□□ -0.97
NPHP3-204ENST00000469232 KLRC1P26715 233 aa9□□□□□ -0.97
NPHP3-204ENST00000469232 CNGA1P29973 690 aa9□□□□□ -0.97
NPHP3-204ENST00000469232 LBX1P52954 281 aa9□□□□□ -0.97
NPHP3-204ENST00000469232 SNRPFP62306 86 aaKnown RBP9□□□□□ -0.97
NPHP3-204ENST00000469232 RAD51AP2Q09MP3 1159 aa9□□□□□ -0.97
NPHP3-204ENST00000469232 PPFIA1Q13136 1202 aa9□□□□□ -0.97
NPHP3-204ENST00000469232 DRP2Q13474 957 aa9□□□□□ -0.97
NPHP3-204ENST00000469232 MYBPC2Q14324 1141 aa9□□□□□ -0.97
NPHP3-204ENST00000469232 MXD4Q14582 209 aaPredicted RBP9□□□□□ -0.97
NPHP3-204ENST00000469232 PPP2R5AQ15172 486 aa9□□□□□ -0.97
NPHP3-204ENST00000469232 KCNA10Q16322 511 aa9□□□□□ -0.97
NPHP3-204ENST00000469232 ODR4Q5SWX8 454 aa9□□□□□ -0.97
NPHP3-204ENST00000469232 NFRKBQ6P4R8 1299 aa9□□□□□ -0.97
NPHP3-204ENST00000469232 RNF180Q86T96 592 aa9□□□□□ -0.97
NPHP3-204ENST00000469232 FAM178BQ8IXR5 827 aa9□□□□□ -0.97
NPHP3-204ENST00000469232 SMYD4Q8IYR2 804 aaPredicted RBP9□□□□□ -0.97
NPHP3-204ENST00000469232 KIAA0319LQ8IZA0 1049 aa9□□□□□ -0.97
NPHP3-204ENST00000469232 MYOCDQ8IZQ8 938 aa9□□□□□ -0.97
NPHP3-204ENST00000469232 ARRDC4Q8NCT1 418 aa9□□□□□ -0.97
NPHP3-204ENST00000469232 ASAP3Q8TDY4 903 aa9□□□□□ -0.97
NPHP3-204ENST00000469232 SH3TC2Q8TF17 1288 aa9□□□□□ -0.97
NPHP3-204ENST00000469232 CTAGE1Q96RT6 745 aa9□□□□□ -0.97
NPHP3-204ENST00000469232 DUSP9Q99956 384 aaKnown RBP9□□□□□ -0.97
NPHP3-204ENST00000469232 UNC93B1Q9H1C4 597 aa9□□□□□ -0.97
NPHP3-204ENST00000469232 POLR3FQ9H1D9 316 aaPredicted RBP9□□□□□ -0.97
NPHP3-204ENST00000469232 TMEM134Q9H6X4 195 aa9□□□□□ -0.97
NPHP3-204ENST00000469232 SLC39A2Q9NP94 309 aa9□□□□□ -0.97
NPHP3-204ENST00000469232 GTF2IRD1Q9UHL9 959 aa9□□□□□ -0.97
NPHP3-204ENST00000469232 TRAF3IP3Q9Y228 551 aa9□□□□□ -0.97
NPHP3-204ENST00000469232 ZMYM2Q9UBW7 1377 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 PHLPP2Q6ZVD8 1323 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 ADGRA3Q8IWK6 1321 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 SFI1A8K8P3 1242 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 PDXKO00764 312 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 PSMA7O14818 248 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 TGFB1I1O43294 461 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 MAP3K7O43318 606 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 KIF20AO95235 890 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 RPLP2P05387 115 aaKnown RBP8.99□□□□□ -0.97
NPHP3-204ENST00000469232 MYL3P08590 195 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 CCL5P13501 91 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 ACLYP53396 1101 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 SOX10P56693 466 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 CDC42EP1Q00587 391 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 MYL5Q02045 173 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 LRRC63Q05C16 580 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 PAK1Q13153 545 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 STIM1Q13586 685 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 KNOP1Q1ED39 458 aaKnown RBP8.99□□□□□ -0.97
NPHP3-204ENST00000469232 TSR1Q2NL82 804 aaKnown RBP8.99□□□□□ -0.97
NPHP3-204ENST00000469232 EDRF1Q3B7T1 1238 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 SLC9C1Q4G0N8 1177 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 L1TD1Q5T7N2 865 aaKnown RBP8.99□□□□□ -0.97
NPHP3-204ENST00000469232 FAM102BQ5T8I3 360 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 CDKAL1Q5VV42 579 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 SPATA1Q5VX52 437 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 ISM2Q6H9L7 571 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 TAS1R3Q7RTX0 852 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 IRF2BP1Q8IU81 584 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 SLC9A9Q8IVB4 645 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 MAP4K3Q8IVH8 894 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 C12orf56Q8IXR9 622 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 MYCT1Q8N699 235 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 RETREG2Q8NC44 543 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 TRAPPC12Q8WVT3 735 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 PSPC1Q8WXF1 523 aaKnown RBP8.99□□□□□ -0.97
NPHP3-204ENST00000469232 P2RX5Q93086 422 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 KCTD12Q96CX2 325 aaKnown RBP8.99□□□□□ -0.97
NPHP3-204ENST00000469232 CCDC43Q96MW1 224 aaKnown RBP8.99□□□□□ -0.97
NPHP3-204ENST00000469232 CCDC113Q9H0I3 377 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 DMAC2Q9NW81 257 aa8.99□□□□□ -0.97
NPHP3-204ENST00000469232 CGNQ9P2M7 1197 aaKnown RBP8.99□□□□□ -0.97
NPHP3-204ENST00000469232 LRRC10BA6NIK2 292 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 SMTNL1A8MU46 457 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 DNM1LO00429 736 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 GJB1P08034 283 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 MYBP10242 640 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 GNAT1P11488 350 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 NMT1P30419 496 aaKnown RBP8.98□□□□□ -0.97
NPHP3-204ENST00000469232 CDK7P50613 346 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 EFNA5P52803 228 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 SMTNP53814 917 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 PMS1P54277 932 aaKnown RBP8.98□□□□□ -0.97
NPHP3-204ENST00000469232 PTENP60484 403 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 LAMTOR4Q0VGL1 99 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 DMP1Q13316 513 aaPredicted RBP8.98□□□□□ -0.97
NPHP3-204ENST00000469232 CAPSQ13938 189 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 MTFR1Q15390 333 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 FAM187BQ17R55 369 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 NBPF20Q3BBV1 942 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 EFCAB12Q6NXP0 572 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 CXCL17Q6UXB2 119 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 LRRC55Q6ZSA7 311 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 STXBP4Q6ZWJ1 553 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 HAUS6Q7Z4H7 955 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 NME8Q8N427 588 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 PRPF31Q8WWY3 499 aaKnown RBP8.98□□□□□ -0.97
NPHP3-204ENST00000469232 NELFBQ8WX92 580 aa8.98□□□□□ -0.97
NPHP3-204ENST00000469232 TMEM143Q96AN5 459 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms