RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 CHST12Q9NRB3 414 aa13.78□□□□□ -0.2
HDAC3-204ENST00000469207 FAM105AQ9NUU6 356 aa13.78□□□□□ -0.2
HDAC3-204ENST00000469207 TBC1D13Q9NVG8 400 aa13.78□□□□□ -0.2
HDAC3-204ENST00000469207 DACT1Q9NYF0 836 aa13.78□□□□□ -0.2
HDAC3-204ENST00000469207 PIN4Q9Y237 131 aaKnown RBP13.78□□□□□ -0.2
HDAC3-204ENST00000469207 H0Y858 1186 aa13.77□□□□□ -0.21
HDAC3-204ENST00000469207 DDHD2O94830 711 aa13.77□□□□□ -0.21
HDAC3-204ENST00000469207 SRGAP2CP0DJJ0 459 aa13.77□□□□□ -0.21
HDAC3-204ENST00000469207 SLC11A1P49279 550 aa13.77□□□□□ -0.21
HDAC3-204ENST00000469207 DNM2P50570 870 aa13.77□□□□□ -0.21
HDAC3-204ENST00000469207 LETM2Q2VYF4 491 aa13.77□□□□□ -0.21
HDAC3-204ENST00000469207 CES5AQ6NT32 575 aa13.77□□□□□ -0.21
HDAC3-204ENST00000469207 CATSPER4Q7RTX7 472 aa13.77□□□□□ -0.21
HDAC3-204ENST00000469207 ZNF710Q8N1W2 664 aa13.77□□□□□ -0.21
HDAC3-204ENST00000469207 TMEM143Q96AN5 459 aa13.77□□□□□ -0.21
HDAC3-204ENST00000469207 ZBP1Q9H171 429 aa13.77□□□□□ -0.21
HDAC3-204ENST00000469207 SLKQ9H2G2 1235 aaPredicted RBP13.77□□□□□ -0.21
HDAC3-204ENST00000469207 MINDY3Q9H8M7 445 aa13.77□□□□□ -0.21
HDAC3-204ENST00000469207 IFT122Q9HBG6 1241 aa13.77□□□□□ -0.21
HDAC3-204ENST00000469207 LIMD1Q9UGP4 676 aa13.77□□□□□ -0.21
HDAC3-204ENST00000469207 FSD2A1L4K1 749 aa13.76□□□□□ -0.21
HDAC3-204ENST00000469207 DEXIO95424 95 aa13.76□□□□□ -0.21
HDAC3-204ENST00000469207 SSBP05455 408 aaKnown RBP eCLIP13.76□□□□□ -0.21
HDAC3-204ENST00000469207 MYBP10242 640 aa13.76□□□□□ -0.21
HDAC3-204ENST00000469207 PTPN5P54829 565 aa13.76□□□□□ -0.21
HDAC3-204ENST00000469207 PSMC5P62195 406 aa13.76□□□□□ -0.21
HDAC3-204ENST00000469207 TPRNQ4KMQ1 711 aa13.76□□□□□ -0.21
HDAC3-204ENST00000469207 NOMO2Q5JPE7 1267 aa13.76□□□□□ -0.21
HDAC3-204ENST00000469207 TMC5Q6UXY8 1006 aa13.76□□□□□ -0.21
HDAC3-204ENST00000469207 AGMOQ6ZNB7 445 aa13.76□□□□□ -0.21
HDAC3-204ENST00000469207 DDX53Q86TM3 631 aaKnown RBP13.76□□□□□ -0.21
HDAC3-204ENST00000469207 TRIM22Q8IYM9 498 aa13.76□□□□□ -0.21
HDAC3-204ENST00000469207 RDM1Q8NG50 284 aa13.76□□□□□ -0.21
HDAC3-204ENST00000469207 OXER1Q8TDS5 423 aa13.76□□□□□ -0.21
HDAC3-204ENST00000469207 SLC22A17Q8WUG5 538 aa13.76□□□□□ -0.21
HDAC3-204ENST00000469207 PRPF31Q8WWY3 499 aaKnown RBP13.76□□□□□ -0.21
HDAC3-204ENST00000469207 MRPL9Q9BYD2 267 aaKnown RBP13.76□□□□□ -0.21
HDAC3-204ENST00000469207 CYP26B1Q9NR63 512 aa13.76□□□□□ -0.21
HDAC3-204ENST00000469207 DDX25Q9UHL0 483 aaKnown RBP13.76□□□□□ -0.21
HDAC3-204ENST00000469207 PCDHB2Q9Y5E7 798 aa13.76□□□□□ -0.21
HDAC3-204ENST00000469207 ZDBF2Q9HCK1 2354 aa13.75□□□□□ -0.21
HDAC3-204ENST00000469207 CPLX1O14810 134 aa13.75□□□□□ -0.21
HDAC3-204ENST00000469207 POMCP01189 267 aa13.75□□□□□ -0.21
HDAC3-204ENST00000469207 CTSAP10619 480 aa13.75□□□□□ -0.21
HDAC3-204ENST00000469207 SFPQP23246 707 aaKnown RBP eCLIP13.75□□□□□ -0.21
HDAC3-204ENST00000469207 CDC42EP1Q00587 391 aa13.75□□□□□ -0.21
HDAC3-204ENST00000469207 RNASELQ05823 741 aaKnown RBP13.75□□□□□ -0.21
HDAC3-204ENST00000469207 ITIH3Q06033 890 aa13.75□□□□□ -0.21
HDAC3-204ENST00000469207 NONOQ15233 471 aaKnown RBP eCLIP13.75□□□□□ -0.21
HDAC3-204ENST00000469207 EARS2Q5JPH6 523 aaKnown RBP13.75□□□□□ -0.21
HDAC3-204ENST00000469207 GLB1LQ6UWU2 654 aa13.75□□□□□ -0.21
HDAC3-204ENST00000469207 TAS1R1Q7RTX1 841 aa13.75□□□□□ -0.21
HDAC3-204ENST00000469207 ZNF410Q86VK4 478 aa13.75□□□□□ -0.21
HDAC3-204ENST00000469207 TMEM87AQ8NBN3 555 aa13.75□□□□□ -0.21
HDAC3-204ENST00000469207 DAGLBQ8NCG7 672 aa13.75□□□□□ -0.21
HDAC3-204ENST00000469207 ZNF274Q96GC6 653 aaPredicted RBP13.75□□□□□ -0.21
HDAC3-204ENST00000469207 CEP170P1Q96L14 293 aa13.75□□□□□ -0.21
HDAC3-204ENST00000469207 TRAIPQ9BWF2 469 aa13.75□□□□□ -0.21
HDAC3-204ENST00000469207 C22orf23Q9BZE7 217 aa13.75□□□□□ -0.21
HDAC3-204ENST00000469207 INO80BQ9C086 356 aaPredicted RBP13.75□□□□□ -0.21
HDAC3-204ENST00000469207 RGL1Q9NZL6 768 aa13.75□□□□□ -0.21
HDAC3-204ENST00000469207 VAV3Q9UKW4 847 aa13.75□□□□□ -0.21
HDAC3-204ENST00000469207 NR2E1Q9Y466 385 aa13.75□□□□□ -0.21
HDAC3-204ENST00000469207 CYP46A1Q9Y6A2 500 aa13.75□□□□□ -0.21
HDAC3-204ENST00000469207 KMT2EQ8IZD2 1858 aa13.75□□□□□ -0.21
HDAC3-204ENST00000469207 FAM205CA6NFA0 338 aa13.74□□□□□ -0.21
HDAC3-204ENST00000469207 ZNF623O75123 536 aa13.74□□□□□ -0.21
HDAC3-204ENST00000469207 REC8O95072 547 aa13.74□□□□□ -0.21
HDAC3-204ENST00000469207 HOXA11P31270 313 aaPredicted RBP13.74□□□□□ -0.21
HDAC3-204ENST00000469207 QARSP47897 775 aaKnown RBP13.74□□□□□ -0.21
HDAC3-204ENST00000469207 SCRN1Q12765 414 aa13.74□□□□□ -0.21
HDAC3-204ENST00000469207 ATAT1Q5SQI0 421 aa13.74□□□□□ -0.21
HDAC3-204ENST00000469207 UBXN11Q5T124 520 aa13.74□□□□□ -0.21
HDAC3-204ENST00000469207 HAS1Q92839 578 aa13.74□□□□□ -0.21
HDAC3-204ENST00000469207 ATOH1Q92858 354 aaPredicted RBP13.74□□□□□ -0.21
HDAC3-204ENST00000469207 RNF39Q9H2S5 420 aa13.74□□□□□ -0.21
HDAC3-204ENST00000469207 KCNMB3Q9NPA1 279 aa13.74□□□□□ -0.21
HDAC3-204ENST00000469207 DBR1Q9UK59 544 aaKnown RBP13.74□□□□□ -0.21
HDAC3-204ENST00000469207 SORCS3Q9UPU3 1222 aa13.74□□□□□ -0.21
HDAC3-204ENST00000469207 COL4A3BPQ9Y5P4 624 aa13.74□□□□□ -0.21
HDAC3-204ENST00000469207 MYO15AQ9UKN7 3530 aa13.73□□□□□ -0.21
HDAC3-204ENST00000469207 A0A087WWV3 80 aa13.73□□□□□ -0.21
HDAC3-204ENST00000469207 C2CD2LO14523 706 aa13.73□□□□□ -0.21
HDAC3-204ENST00000469207 CCNT1O60563 726 aaKnown RBP13.73□□□□□ -0.21
HDAC3-204ENST00000469207 MTHFRP42898 656 aa13.73□□□□□ -0.21
HDAC3-204ENST00000469207 LAMTOR4Q0VGL1 99 aa13.73□□□□□ -0.21
HDAC3-204ENST00000469207 PPP2R5CQ13362 524 aa13.73□□□□□ -0.21
HDAC3-204ENST00000469207 CTTNQ14247 550 aaKnown RBP13.73□□□□□ -0.21
HDAC3-204ENST00000469207 PTPN14Q15678 1187 aa13.73□□□□□ -0.21
HDAC3-204ENST00000469207 MOXD1Q6UVY6 613 aa13.73□□□□□ -0.21
HDAC3-204ENST00000469207 PIK3AP1Q6ZUJ8 805 aa13.73□□□□□ -0.21
HDAC3-204ENST00000469207 KRT25Q7Z3Z0 450 aa13.73□□□□□ -0.21
HDAC3-204ENST00000469207 MRPL10Q7Z7H8 261 aaKnown RBP13.73□□□□□ -0.21
HDAC3-204ENST00000469207 TMEM105Q8N8V8 129 aa13.73□□□□□ -0.21
HDAC3-204ENST00000469207 SMG8Q8ND04 991 aaKnown RBP13.73□□□□□ -0.21
HDAC3-204ENST00000469207 DYDC2Q96IM9 177 aa13.73□□□□□ -0.21
HDAC3-204ENST00000469207 NECTIN4Q96NY8 510 aa13.73□□□□□ -0.21
HDAC3-204ENST00000469207 KLHL5Q96PQ7 755 aa13.73□□□□□ -0.21
HDAC3-204ENST00000469207 PHF20Q9BVI0 1012 aa13.73□□□□□ -0.21
HDAC3-204ENST00000469207 DHX33Q9H6R0 707 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms