RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 HACE1Q8IYU2 909 aa9.46□□□□□ -0.9
SSBP1-208ENST00000469123 CNNM3Q8NE01 707 aa9.46□□□□□ -0.9
SSBP1-208ENST00000469123 ASAP3Q8TDY4 903 aa9.46□□□□□ -0.9
SSBP1-208ENST00000469123 SPIRE2Q8WWL2 714 aa9.46□□□□□ -0.9
SSBP1-208ENST00000469123 TIFAQ96CG3 184 aa9.46□□□□□ -0.9
SSBP1-208ENST00000469123 CCDC34Q96HJ3 373 aa9.46□□□□□ -0.9
SSBP1-208ENST00000469123 EPSTI1Q96J88 318 aa9.46□□□□□ -0.9
SSBP1-208ENST00000469123 CLIC6Q96NY7 704 aa9.46□□□□□ -0.9
SSBP1-208ENST00000469123 PPP1R16BQ96T49 567 aa9.46□□□□□ -0.9
SSBP1-208ENST00000469123 ADAM2Q99965 735 aa9.46□□□□□ -0.9
SSBP1-208ENST00000469123 PBX4Q9BYU1 374 aa9.46□□□□□ -0.9
SSBP1-208ENST00000469123 TNMDQ9H2S6 317 aa9.46□□□□□ -0.9
SSBP1-208ENST00000469123 CDHR5Q9HBB8 845 aa9.46□□□□□ -0.9
SSBP1-208ENST00000469123 BLOC1S4Q9NUP1 217 aa9.46□□□□□ -0.9
SSBP1-208ENST00000469123 AGPAT5Q9NUQ2 364 aa9.46□□□□□ -0.9
SSBP1-208ENST00000469123 TMEM161AQ9NX61 479 aa9.46□□□□□ -0.9
SSBP1-208ENST00000469123 LRFN2Q9ULH4 789 aa9.46□□□□□ -0.9
SSBP1-208ENST00000469123 PCDHB7Q9Y5E2 793 aa9.46□□□□□ -0.9
SSBP1-208ENST00000469123 GBF1Q92538 1859 aa9.46□□□□□ -0.9
SSBP1-208ENST00000469123 ZMYM2Q9UBW7 1377 aa9.46□□□□□ -0.9
SSBP1-208ENST00000469123 PTPRSQ13332 1948 aa9.45□□□□□ -0.9
SSBP1-208ENST00000469123 A0A0U1RQF3 1178 aa9.45□□□□□ -0.9
SSBP1-208ENST00000469123 A0A1W2PQ27 194 aa9.45□□□□□ -0.9
SSBP1-208ENST00000469123 A0A1W2PQ64 194 aa9.45□□□□□ -0.9
SSBP1-208ENST00000469123 A0A1W2PQD8 194 aa9.45□□□□□ -0.9
SSBP1-208ENST00000469123 C9IYK1 514 aa9.45□□□□□ -0.9
SSBP1-208ENST00000469123 INO80B-WBP1J3KQ70 363 aa9.45□□□□□ -0.9
SSBP1-208ENST00000469123 HIP1RO75146 1068 aa9.45□□□□□ -0.9
SSBP1-208ENST00000469123 TBCAO75347 108 aaKnown RBP9.45□□□□□ -0.9
SSBP1-208ENST00000469123 KRT18P05783 430 aaKnown RBP9.45□□□□□ -0.9
SSBP1-208ENST00000469123 PLS3P13797 630 aa9.45□□□□□ -0.9
SSBP1-208ENST00000469123 CMA1P23946 247 aa9.45□□□□□ -0.9
SSBP1-208ENST00000469123 FAM189BP81408 668 aa9.45□□□□□ -0.9
SSBP1-208ENST00000469123 DEFB103AP81534 67 aa9.45□□□□□ -0.9
SSBP1-208ENST00000469123 HTRA4P83105 476 aaPredicted RBP9.45□□□□□ -0.9
SSBP1-208ENST00000469123 DSC3Q14574 896 aa9.45□□□□□ -0.9
SSBP1-208ENST00000469123 TWF2Q6IBS0 349 aaKnown RBP9.45□□□□□ -0.9
SSBP1-208ENST00000469123 GPBP1Q86WP2 473 aa9.45□□□□□ -0.9
SSBP1-208ENST00000469123 LEO1Q8WVC0 666 aaPredicted RBP9.45□□□□□ -0.9
SSBP1-208ENST00000469123 PGBD4Q96DM1 585 aa9.45□□□□□ -0.9
SSBP1-208ENST00000469123 SAMD11Q96NU1 681 aa9.45□□□□□ -0.9
SSBP1-208ENST00000469123 YME1L1Q96TA2 773 aa9.45□□□□□ -0.9
SSBP1-208ENST00000469123 NTPCRQ9BSD7 190 aaKnown RBP9.45□□□□□ -0.9
SSBP1-208ENST00000469123 RUSC1Q9BVN2 902 aa9.45□□□□□ -0.9
SSBP1-208ENST00000469123 TMX1Q9H3N1 280 aa9.45□□□□□ -0.9
SSBP1-208ENST00000469123 TMEM134Q9H6X4 195 aa9.45□□□□□ -0.9
SSBP1-208ENST00000469123 SLC28A3Q9HAS3 691 aa9.45□□□□□ -0.9
SSBP1-208ENST00000469123 PARVGQ9HBI0 331 aa9.45□□□□□ -0.9
SSBP1-208ENST00000469123 UBN1Q9NPG3 1134 aa9.45□□□□□ -0.9
SSBP1-208ENST00000469123 CHMP5Q9NZZ3 219 aa9.45□□□□□ -0.9
SSBP1-208ENST00000469123 SEL1LQ9UBV2 794 aa9.45□□□□□ -0.9
SSBP1-208ENST00000469123 PCDHA7Q9UN72 937 aa9.45□□□□□ -0.9
SSBP1-208ENST00000469123 PIN4Q9Y237 131 aaKnown RBP9.45□□□□□ -0.9
SSBP1-208ENST00000469123 LAMA3Q16787 3333 aa9.44□□□□□ -0.9
SSBP1-208ENST00000469123 GOLGA6L4A6NEF3 574 aa9.44□□□□□ -0.9
SSBP1-208ENST00000469123 N4BP3O15049 544 aa9.44□□□□□ -0.9
SSBP1-208ENST00000469123 ZNF623O75123 536 aa9.44□□□□□ -0.9
SSBP1-208ENST00000469123 FAM13AO94988 1023 aa9.44□□□□□ -0.9
SSBP1-208ENST00000469123 MYL1P05976 194 aa9.44□□□□□ -0.9
SSBP1-208ENST00000469123 MAPTP10636 758 aaKnown RBP9.44□□□□□ -0.9
SSBP1-208ENST00000469123 GAP43P17677 238 aa9.44□□□□□ -0.9
SSBP1-208ENST00000469123 ZNF131P52739 623 aa9.44□□□□□ -0.9
SSBP1-208ENST00000469123 MBTD1Q05BQ5 628 aa9.44□□□□□ -0.9
SSBP1-208ENST00000469123 MCM6Q14566 821 aa9.44□□□□□ -0.9
SSBP1-208ENST00000469123 TCTN1Q2MV58 587 aa9.44□□□□□ -0.9
SSBP1-208ENST00000469123 FOXD4L6Q3SYB3 417 aaPredicted RBP9.44□□□□□ -0.9
SSBP1-208ENST00000469123 SPECC1Q5M775 1068 aa9.44□□□□□ -0.9
SSBP1-208ENST00000469123 RESP18Q5W5W9 173 aa9.44□□□□□ -0.9
SSBP1-208ENST00000469123 CNNM4Q6P4Q7 775 aa9.44□□□□□ -0.9
SSBP1-208ENST00000469123 FOXD4L3Q6VB84 417 aaPredicted RBP9.44□□□□□ -0.9
SSBP1-208ENST00000469123 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.44□□□□□ -0.96e-8■■■■■ 39.5
SSBP1-208ENST00000469123 MAEAQ7L5Y9 396 aa9.44□□□□□ -0.9
SSBP1-208ENST00000469123 KSR1Q8IVT5 923 aa9.44□□□□□ -0.9
SSBP1-208ENST00000469123 CMTR2Q8IYT2 770 aaKnown RBP9.44□□□□□ -0.9
SSBP1-208ENST00000469123 SP7Q8TDD2 431 aaPredicted RBP9.44□□□□□ -0.9
SSBP1-208ENST00000469123 LINC01599Q8WXQ3 324 aa9.44□□□□□ -0.9
SSBP1-208ENST00000469123 PLIN2Q99541 437 aa9.44□□□□□ -0.9
SSBP1-208ENST00000469123 ADPGKQ9BRR6 497 aa9.44□□□□□ -0.9
SSBP1-208ENST00000469123 FZD8Q9H461 694 aa9.44□□□□□ -0.9
SSBP1-208ENST00000469123 GPRC5CQ9NQ84 441 aa9.44□□□□□ -0.9
SSBP1-208ENST00000469123 KMT5AQ9NQR1 393 aa9.44□□□□□ -0.9
SSBP1-208ENST00000469123 PCDH10Q9P2E7 1040 aa9.44□□□□□ -0.9
SSBP1-208ENST00000469123 ARHGAP28Q9P2N2 729 aa9.44□□□□□ -0.9
SSBP1-208ENST00000469123 CNTNAP2Q9UHC6 1331 aa9.44□□□□□ -0.9
SSBP1-208ENST00000469123 RALGAPA2Q2PPJ7 1873 aa9.44□□□□□ -0.9
SSBP1-208ENST00000469123 ADGRA3Q8IWK6 1321 aa9.43□□□□□ -0.9
SSBP1-208ENST00000469123 A0A087WWV3 80 aa9.43□□□□□ -0.9
SSBP1-208ENST00000469123 CCDC169A6NNP5 214 aa9.43□□□□□ -0.9
SSBP1-208ENST00000469123 K7ERI5 159 aa9.43□□□□□ -0.9
SSBP1-208ENST00000469123 SOX1O00570 391 aaPredicted RBP9.43□□□□□ -0.9
SSBP1-208ENST00000469123 ACKR2O00590 384 aa9.43□□□□□ -0.9
SSBP1-208ENST00000469123 TSPAN1O60635 241 aa9.43□□□□□ -0.9
SSBP1-208ENST00000469123 DGKIO75912 1065 aa9.43□□□□□ -0.9
SSBP1-208ENST00000469123 PRKCBP05771 671 aa9.43□□□□□ -0.9
SSBP1-208ENST00000469123 NPTX2P47972 431 aa9.43□□□□□ -0.9
SSBP1-208ENST00000469123 PEX3P56589 373 aa9.43□□□□□ -0.9
SSBP1-208ENST00000469123 STRN3Q13033 797 aa9.43□□□□□ -0.9
SSBP1-208ENST00000469123 MAPK7Q13164 816 aa9.43□□□□□ -0.9
SSBP1-208ENST00000469123 PRPF4BQ13523 1007 aaKnown RBP9.43□□□□□ -0.9
SSBP1-208ENST00000469123 ALCAMQ13740 583 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms