RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 ATP6V1DQ9Y5K8 247 aa16.38■□□□□ 0.21
TMEM39A-205ENST00000468676 LCHNA4D1U4 455 aa16.37■□□□□ 0.21
TMEM39A-205ENST00000468676 INO80B-WBP1J3KQ70 363 aa16.37■□□□□ 0.21
TMEM39A-205ENST00000468676 SLC34A2O95436 690 aa16.37■□□□□ 0.21
TMEM39A-205ENST00000468676 SSBP05455 408 aaKnown RBP eCLIP16.37■□□□□ 0.21
TMEM39A-205ENST00000468676 RAB27AP51159 221 aa16.37■□□□□ 0.21
TMEM39A-205ENST00000468676 SLC12A3P55017 1021 aa16.37■□□□□ 0.21
TMEM39A-205ENST00000468676 ERVK-21P61565 698 aa16.37■□□□□ 0.21
TMEM39A-205ENST00000468676 GRIN2CQ14957 1233 aa16.37■□□□□ 0.21
TMEM39A-205ENST00000468676 CDCA2Q69YH5 1023 aaPredicted RBP16.37■□□□□ 0.21
TMEM39A-205ENST00000468676 TWF2Q6IBS0 349 aaKnown RBP16.37■□□□□ 0.21
TMEM39A-205ENST00000468676 ECHDC2Q86YB7 292 aa16.37■□□□□ 0.21
TMEM39A-205ENST00000468676 CMTR2Q8IYT2 770 aaKnown RBP16.37■□□□□ 0.21
TMEM39A-205ENST00000468676 DEPTORQ8TB45 409 aa16.37■□□□□ 0.21
TMEM39A-205ENST00000468676 RSPH1Q8WYR4 309 aa16.37■□□□□ 0.21
TMEM39A-205ENST00000468676 CCDC51Q96ER9 411 aa16.37■□□□□ 0.21
TMEM39A-205ENST00000468676 GUCD1Q96NT3 240 aa16.37■□□□□ 0.21
TMEM39A-205ENST00000468676 PLIN2Q99541 437 aa16.37■□□□□ 0.21
TMEM39A-205ENST00000468676 CDX2Q99626 313 aaPredicted RBP16.37■□□□□ 0.21
TMEM39A-205ENST00000468676 MINDY3Q9H8M7 445 aa16.37■□□□□ 0.21
TMEM39A-205ENST00000468676 RWDD3Q9Y3V2 267 aa16.37■□□□□ 0.21
TMEM39A-205ENST00000468676 ADGRA3Q8IWK6 1321 aa16.37■□□□□ 0.21
TMEM39A-205ENST00000468676 RBAK-RBAKDNI3L0D1 243 aa16.36■□□□□ 0.21
TMEM39A-205ENST00000468676 PLCG1P19174 1290 aa16.36■□□□□ 0.21
TMEM39A-205ENST00000468676 EFNA5P52803 228 aa16.36■□□□□ 0.21
TMEM39A-205ENST00000468676 MBTD1Q05BQ5 628 aa16.36■□□□□ 0.21
TMEM39A-205ENST00000468676 BTG3Q14201 252 aaPredicted RBP16.36■□□□□ 0.21
TMEM39A-205ENST00000468676 KARSQ15046 597 aaKnown RBP16.36■□□□□ 0.21
TMEM39A-205ENST00000468676 FIBCD1Q8N539 461 aa16.36■□□□□ 0.21
TMEM39A-205ENST00000468676 SYMPKQ92797 1274 aaKnown RBP16.36■□□□□ 0.21
TMEM39A-205ENST00000468676 EPSTI1Q96J88 318 aa16.36■□□□□ 0.21
TMEM39A-205ENST00000468676 PRIMPOLQ96LW4 560 aa16.36■□□□□ 0.21
TMEM39A-205ENST00000468676 CLIC6Q96NY7 704 aa16.36■□□□□ 0.21
TMEM39A-205ENST00000468676 GAS2L1Q99501 681 aaPredicted RBP16.36■□□□□ 0.21
TMEM39A-205ENST00000468676 RUSC1Q9BVN2 902 aa16.36■□□□□ 0.21
TMEM39A-205ENST00000468676 RC3H2Q9HBD1 1191 aaKnown RBP16.36■□□□□ 0.21
TMEM39A-205ENST00000468676 PRMT7Q9NVM4 692 aaPredicted RBP16.36■□□□□ 0.21
TMEM39A-205ENST00000468676 STK17AQ9UEE5 414 aa16.36■□□□□ 0.21
TMEM39A-205ENST00000468676 STXBP5LQ9Y2K9 1186 aa16.36■□□□□ 0.21
TMEM39A-205ENST00000468676 PHLPP2Q6ZVD8 1323 aa16.36■□□□□ 0.21
TMEM39A-205ENST00000468676 MYH11P35749 1972 aa16.35■□□□□ 0.21
TMEM39A-205ENST00000468676 TRANK1O15050 2925 aa16.35■□□□□ 0.21
TMEM39A-205ENST00000468676 CUTAO60888 179 aa16.35■□□□□ 0.21
TMEM39A-205ENST00000468676 ZNF623O75123 536 aa16.35■□□□□ 0.21
TMEM39A-205ENST00000468676 HIP1RO75146 1068 aa16.35■□□□□ 0.21
TMEM39A-205ENST00000468676 DDIT3P35638 169 aa16.35■□□□□ 0.21
TMEM39A-205ENST00000468676 DMP1Q13316 513 aaPredicted RBP16.35■□□□□ 0.21
TMEM39A-205ENST00000468676 FAM187BQ17R55 369 aa16.35■□□□□ 0.21
TMEM39A-205ENST00000468676 SPECC1Q5M775 1068 aa16.35■□□□□ 0.21
TMEM39A-205ENST00000468676 RRAGBQ5VZM2 374 aa16.35■□□□□ 0.21
TMEM39A-205ENST00000468676 NOTUMQ6P988 496 aa16.35■□□□□ 0.21
TMEM39A-205ENST00000468676 PPP4R3CPQ6ZMV5 832 aa16.35■□□□□ 0.21
TMEM39A-205ENST00000468676 CCDC73Q6ZRK6 1079 aa16.35■□□□□ 0.21
TMEM39A-205ENST00000468676 RAD54LQ92698 747 aa16.35■□□□□ 0.21
TMEM39A-205ENST00000468676 PRDM12Q9H4Q4 367 aa16.35■□□□□ 0.21
TMEM39A-205ENST00000468676 BLOC1S4Q9NUP1 217 aa16.35■□□□□ 0.21
TMEM39A-205ENST00000468676 RBM19Q9Y4C8 960 aaKnown RBP16.35■□□□□ 0.21
TMEM39A-205ENST00000468676 TSPAN1O60635 241 aa16.34■□□□□ 0.21
TMEM39A-205ENST00000468676 ARHGEF15O94989 841 aa16.34■□□□□ 0.21
TMEM39A-205ENST00000468676 HOXA11P31270 313 aaPredicted RBP16.34■□□□□ 0.21
TMEM39A-205ENST00000468676 DNM1Q05193 864 aaKnown RBP16.34■□□□□ 0.21
TMEM39A-205ENST00000468676 MAPK6Q16659 721 aa16.34■□□□□ 0.21
TMEM39A-205ENST00000468676 FOXD4L6Q3SYB3 417 aaPredicted RBP16.34■□□□□ 0.21
TMEM39A-205ENST00000468676 FOXD4L3Q6VB84 417 aaPredicted RBP16.34■□□□□ 0.21
TMEM39A-205ENST00000468676 USP49Q70CQ1 688 aa16.34■□□□□ 0.21
TMEM39A-205ENST00000468676 ABI1Q8IZP0 508 aa16.34■□□□□ 0.21
TMEM39A-205ENST00000468676 CNNM3Q8NE01 707 aa16.34■□□□□ 0.21
TMEM39A-205ENST00000468676 ARNTL2Q8WYA1 636 aa16.34■□□□□ 0.21
TMEM39A-205ENST00000468676 BSNDQ8WZ55 320 aa16.34■□□□□ 0.21
TMEM39A-205ENST00000468676 LARP4BQ92615 738 aaKnown RBP16.34■□□□□ 0.21
TMEM39A-205ENST00000468676 CLP1Q92989 425 aaKnown RBP16.34■□□□□ 0.21
TMEM39A-205ENST00000468676 PGBD4Q96DM1 585 aa16.34■□□□□ 0.21
TMEM39A-205ENST00000468676 FZD8Q9H461 694 aa16.34■□□□□ 0.21
TMEM39A-205ENST00000468676 FAM105AQ9NUU6 356 aa16.34■□□□□ 0.21
TMEM39A-205ENST00000468676 ODF2LQ9ULJ1 636 aa16.34■□□□□ 0.21
TMEM39A-205ENST00000468676 RALGAPA2Q2PPJ7 1873 aa16.33■□□□□ 0.21
TMEM39A-205ENST00000468676 FNDC1Q4ZHG4 1894 aaPredicted RBP16.33■□□□□ 0.21
TMEM39A-205ENST00000468676 RB1P06400 928 aa16.33■□□□□ 0.2
TMEM39A-205ENST00000468676 FOSL2P15408 326 aa16.33■□□□□ 0.2
TMEM39A-205ENST00000468676 IBSPP21815 317 aaPredicted RBP16.33■□□□□ 0.2
TMEM39A-205ENST00000468676 SCP2P22307 547 aa16.33■□□□□ 0.2
TMEM39A-205ENST00000468676 ME1P48163 572 aa16.33■□□□□ 0.2
TMEM39A-205ENST00000468676 SMTNP53814 917 aa16.33■□□□□ 0.2
TMEM39A-205ENST00000468676 KRT85P78386 507 aa16.33■□□□□ 0.2
TMEM39A-205ENST00000468676 NUCB2P80303 420 aa16.33■□□□□ 0.2
TMEM39A-205ENST00000468676 AMHR2Q16671 573 aa16.33■□□□□ 0.2
TMEM39A-205ENST00000468676 ZNF598Q86UK7 904 aaKnown RBP16.33■□□□□ 0.2
TMEM39A-205ENST00000468676 GPBP1Q86WP2 473 aa16.33■□□□□ 0.2
TMEM39A-205ENST00000468676 TMEM192Q8IY95 271 aa16.33■□□□□ 0.2
TMEM39A-205ENST00000468676 DAW1Q8N136 415 aa16.33■□□□□ 0.2
TMEM39A-205ENST00000468676 MYLIPQ8WY64 445 aa16.33■□□□□ 0.2
TMEM39A-205ENST00000468676 NTPCRQ9BSD7 190 aaKnown RBP16.33■□□□□ 0.2
TMEM39A-205ENST00000468676 TMEM117Q9H0C3 514 aa16.33■□□□□ 0.2
TMEM39A-205ENST00000468676 LARSQ9P2J5 1176 aaKnown RBP16.33■□□□□ 0.2
TMEM39A-205ENST00000468676 RCOR1Q9UKL0 485 aa16.33■□□□□ 0.2
TMEM39A-205ENST00000468676 ZDHHC9Q9Y397 364 aa16.33■□□□□ 0.2
TMEM39A-205ENST00000468676 CCDC169A6NNP5 214 aa16.32■□□□□ 0.2
TMEM39A-205ENST00000468676 TBKBP1A7MCY6 615 aa16.32■□□□□ 0.2
TMEM39A-205ENST00000468676 H0YCG3 227 aa16.32■□□□□ 0.2
TMEM39A-205ENST00000468676 K7ERI5 159 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms