RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 CCDC83Q8IWF9 413 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 CELF2-AS1Q8N7Q2 184 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 IGDCC4Q8TDY8 1250 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 SNX21Q969T3 373 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 TMX3Q96JJ7 454 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 ZSCAN31Q96LW9 406 aaPredicted RBP4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 TTC14Q96N46 770 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 MYL10Q9BUA6 226 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 GLIS2Q9BZE0 524 aaPredicted RBP4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 PRDM14Q9GZV8 571 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 DUSP15Q9H1R2 295 aaPredicted RBP4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 SLKQ9H2G2 1235 aaPredicted RBP4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 KAT14Q9H8E8 782 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 SEMA3GQ9NS98 782 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 PCMTD2Q9NV79 361 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 SIRPGQ9P1W8 387 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 CLIP2Q9UDT6 1046 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 CCDC39Q9UFE4 941 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 TPCN1Q9ULQ1 816 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 STX8Q9UNK0 236 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 ANGEL1Q9UNK9 670 aaKnown RBP4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 TNKSO95271 1327 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 SHISA3A0PJX4 238 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 GOLGA8AA7E2F4 631 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 GOLGA8BA8MQT2 603 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 TRAF5O00463 557 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 ZBTB43O43298 467 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 CBFA2T2O43439 604 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 DDAH1O94760 285 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 GJB6O95452 261 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 GH2P01242 217 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 EPHX1P07099 455 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 PCP11498 1178 aaKnown RBP4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 ITGA4P13612 1032 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 CD247P20963 164 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 PDIA3P30101 505 aaKnown RBP4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 JAG1P78504 1218 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 GABPAQ06546 454 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 SERINC3Q13530 473 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 SEPT2Q15019 361 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 TCEAL1Q15170 157 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 ME3Q16798 604 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 CLEC16AQ2KHT3 1053 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 CCDC178Q5BJE1 867 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 MOB2Q70IA6 237 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 TMPRSS7Q7RTY8 843 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 TMC3Q7Z5M5 1100 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 CATIPQ7Z7H3 387 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 TSPYL5Q86VY4 417 aaPredicted RBP4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 MICU3Q86XE3 530 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 LRRC47Q8N1G4 583 aaKnown RBP4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 TMTC2Q8N394 836 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 SYTL5Q8TDW5 730 aaPredicted RBP4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 MICAL1Q8TDZ2 1067 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 BCL7CQ8WUZ0 217 aaPredicted RBP4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 PIBF1Q8WXW3 757 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 ZKSCAN4Q969J2 545 aaPredicted RBP4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 UBE2FQ969M7 185 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 IL17RAQ96F46 866 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 DDX11Q96FC9 970 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 CDCA5Q96FF9 252 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 CEP95Q96GE4 821 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 CCDC17Q96LX7 622 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 TEPSINQ96N21 525 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 TMEM47Q9BQJ4 181 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 HDAC8Q9BY41 377 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 ZNF341Q9BYN7 854 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 KLHL25Q9H0H3 589 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 GBP3Q9H0R5 595 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 ALDH8A1Q9H2A2 487 aaPredicted RBP4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 DNAJC18Q9H819 358 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 LY9Q9HBG7 655 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 NCOA5Q9HCD5 579 aaKnown RBP4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 GP6Q9HCN6 339 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 IL17RBQ9NRM6 502 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 WHRNQ9P202 907 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 PGAP2Q9UHJ9 254 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 FBXL21Q9UKT6 434 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 SLC5A6Q9Y289 635 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 ZNF451Q9Y4E5 1061 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 PSME4Q14997 1843 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 MYH1P12882 1939 aa4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 DICER1Q9UPY3 1922 aaKnown RBP4.73□□□□□ -1.65
TMEM39A-204ENST00000468545 TIAM2Q8IVF5 1701 aa4.72□□□□□ -1.65
TMEM39A-204ENST00000468545 ZNF646O15015 1829 aaPredicted RBP4.72□□□□□ -1.65
TMEM39A-204ENST00000468545 ANKRD34BA5PLL1 514 aa4.72□□□□□ -1.65
TMEM39A-204ENST00000468545 UBE2Q2LH0YL09 131 aa4.72□□□□□ -1.65
TMEM39A-204ENST00000468545 CPLX1O14810 134 aa4.72□□□□□ -1.65
TMEM39A-204ENST00000468545 PFKFB2O60825 505 aa4.72□□□□□ -1.65
TMEM39A-204ENST00000468545 USP2O75604 605 aaPredicted RBP4.72□□□□□ -1.65
TMEM39A-204ENST00000468545 PRAMEF1O95521 474 aa4.72□□□□□ -1.65
TMEM39A-204ENST00000468545 GOLGA8HP0CJ92 632 aa4.72□□□□□ -1.65
TMEM39A-204ENST00000468545 TOP1P11387 765 aaKnown RBP4.72□□□□□ -1.65
TMEM39A-204ENST00000468545 EEF2P13639 858 aaKnown RBP4.72□□□□□ -1.65
TMEM39A-204ENST00000468545 TPP2P29144 1249 aaPredicted RBP4.72□□□□□ -1.65
TMEM39A-204ENST00000468545 NF2P35240 595 aa4.72□□□□□ -1.65
TMEM39A-204ENST00000468545 LIFRP42702 1097 aa4.72□□□□□ -1.65
TMEM39A-204ENST00000468545 METAP2P50579 478 aaKnown RBP eCLIP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms