RNA–Protein interactions for RNA: ENST00000468284.1

CKAP2-205, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 3

Gene CKAP2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-205ENST00000468284 SLF1Q9BQI6 1058 aa10.68□□□□□ -0.7
CKAP2-205ENST00000468284 DCP1AQ9NPI6 582 aaPredicted RBP10.68□□□□□ -0.7
CKAP2-205ENST00000468284 HOMER2Q9NSB8 354 aa10.68□□□□□ -0.7
CKAP2-205ENST00000468284 PRKAG3Q9UGI9 489 aa10.68□□□□□ -0.7
CKAP2-205ENST00000468284 NOB1Q9ULX3 412 aaKnown RBP10.68□□□□□ -0.7
CKAP2-205ENST00000468284 BRWD1Q9NSI6 2320 aa10.67□□□□□ -0.7
CKAP2-205ENST00000468284 PRKAB2O43741 272 aa10.67□□□□□ -0.7
CKAP2-205ENST00000468284 RNGTTO60942 597 aaKnown RBP10.67□□□□□ -0.7
CKAP2-205ENST00000468284 BAIAP3O94812 1187 aa10.67□□□□□ -0.7
CKAP2-205ENST00000468284 GJB5O95377 273 aa10.67□□□□□ -0.7
CKAP2-205ENST00000468284 KCNJ6P48051 423 aa10.67□□□□□ -0.7
CKAP2-205ENST00000468284 PURAQ00577 322 aaKnown RBP10.67□□□□□ -0.7
CKAP2-205ENST00000468284 G3BP1Q13283 466 aaKnown RBP eCLIP10.67□□□□□ -0.7
CKAP2-205ENST00000468284 ERMP1Q7Z2K6 904 aa10.67□□□□□ -0.7
CKAP2-205ENST00000468284 LCORLQ8N3X6 602 aa10.67□□□□□ -0.7
CKAP2-205ENST00000468284 FAM133AQ8N9E0 248 aa10.67□□□□□ -0.7
CKAP2-205ENST00000468284 KCNB2Q92953 911 aa10.67□□□□□ -0.7
CKAP2-205ENST00000468284 PABPC5Q96DU9 382 aaKnown RBP10.67□□□□□ -0.7
CKAP2-205ENST00000468284 MRPL38Q96DV4 380 aaKnown RBP10.67□□□□□ -0.7
CKAP2-205ENST00000468284 UPF3BQ9BZI7 483 aaKnown RBP10.67□□□□□ -0.7
CKAP2-205ENST00000468284 CCDC8Q9H0W5 538 aaPredicted RBP10.67□□□□□ -0.7
CKAP2-205ENST00000468284 SH2D4AQ9H788 454 aa10.67□□□□□ -0.7
CKAP2-205ENST00000468284 PPP4R2Q9NY27 417 aa10.67□□□□□ -0.7
CKAP2-205ENST00000468284 CLDND1Q9NY35 253 aa10.67□□□□□ -0.7
CKAP2-205ENST00000468284 DBNLQ9UJU6 430 aaKnown RBP10.67□□□□□ -0.7
CKAP2-205ENST00000468284 TECTAO75443 2155 aa10.67□□□□□ -0.7
CKAP2-205ENST00000468284 TRIOO75962 3097 aa10.66□□□□□ -0.7
CKAP2-205ENST00000468284 MED19A0JLT2 244 aaPredicted RBP10.66□□□□□ -0.7
CKAP2-205ENST00000468284 ZEB2O60315 1214 aa10.66□□□□□ -0.7
CKAP2-205ENST00000468284 MYL3P08590 195 aa10.66□□□□□ -0.7
CKAP2-205ENST00000468284 ID4P47928 161 aa10.66□□□□□ -0.7
CKAP2-205ENST00000468284 CDK8P49336 464 aa10.66□□□□□ -0.7
CKAP2-205ENST00000468284 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.66□□□□□ -0.7
CKAP2-205ENST00000468284 PDZD3Q86UT5 571 aa10.66□□□□□ -0.7
CKAP2-205ENST00000468284 RETREG2Q8NC44 543 aa10.66□□□□□ -0.7
CKAP2-205ENST00000468284 ZNF512BQ96KM6 892 aaPredicted RBP10.66□□□□□ -0.7
CKAP2-205ENST00000468284 CTAGE1Q96RT6 745 aa10.66□□□□□ -0.7
CKAP2-205ENST00000468284 RAD9AQ99638 391 aa10.66□□□□□ -0.7
CKAP2-205ENST00000468284 SEZ6LQ9BYH1 1024 aa10.66□□□□□ -0.7
CKAP2-205ENST00000468284 SMC4Q9NTJ3 1288 aa10.66□□□□□ -0.7
CKAP2-205ENST00000468284 ATP2A1O14983 1001 aa10.65□□□□□ -0.7
CKAP2-205ENST00000468284 MBTPS2O43462 519 aa10.65□□□□□ -0.7
CKAP2-205ENST00000468284 NBNO60934 754 aa10.65□□□□□ -0.7
CKAP2-205ENST00000468284 GTF2F1P35269 517 aaKnown RBP eCLIP10.65□□□□□ -0.7
CKAP2-205ENST00000468284 SMAD2Q15796 467 aaKnown RBP10.65□□□□□ -0.7
CKAP2-205ENST00000468284 IQSEC1Q6DN90 963 aa10.65□□□□□ -0.7
CKAP2-205ENST00000468284 SUGP1Q8IWZ8 645 aaKnown RBP10.65□□□□□ -0.7
CKAP2-205ENST00000468284 A1CFQ9NQ94 594 aaKnown RBP10.65□□□□□ -0.7
CKAP2-205ENST00000468284 SWAP70Q9UH65 585 aa10.65□□□□□ -0.7
CKAP2-205ENST00000468284 PCOLCE2Q9UKZ9 415 aa10.65□□□□□ -0.7
CKAP2-205ENST00000468284 MYH8P13535 1937 aa10.64□□□□□ -0.71
CKAP2-205ENST00000468284 E9PSI1 815 aa10.64□□□□□ -0.71
CKAP2-205ENST00000468284 F5H6K3 240 aa10.64□□□□□ -0.71
CKAP2-205ENST00000468284 BIN1O00499 593 aa10.64□□□□□ -0.71
CKAP2-205ENST00000468284 NDUFB10O96000 172 aa10.64□□□□□ -0.71
CKAP2-205ENST00000468284 C8AP07357 584 aa10.64□□□□□ -0.71
CKAP2-205ENST00000468284 CHMP4BP1P59074 171 aa10.64□□□□□ -0.71
CKAP2-205ENST00000468284 KLRC3Q07444 240 aa10.64□□□□□ -0.71
CKAP2-205ENST00000468284 EPC2Q52LR7 807 aa10.64□□□□□ -0.71
CKAP2-205ENST00000468284 RPAINQ86UA6 219 aa10.64□□□□□ -0.71
CKAP2-205ENST00000468284 CERS3Q8IU89 383 aa10.64□□□□□ -0.71
CKAP2-205ENST00000468284 SULF2Q8IWU5 870 aa10.64□□□□□ -0.71
CKAP2-205ENST00000468284 PRPF38AQ8NAV1 312 aaKnown RBP10.64□□□□□ -0.71
CKAP2-205ENST00000468284 EAF2Q96CJ1 260 aaPredicted RBP10.64□□□□□ -0.71
CKAP2-205ENST00000468284 PRRX2Q99811 253 aa10.64□□□□□ -0.71
CKAP2-205ENST00000468284 BCO2Q9BYV7 579 aa10.64□□□□□ -0.71
CKAP2-205ENST00000468284 ARMT1Q9H993 441 aa10.64□□□□□ -0.71
CKAP2-205ENST00000468284 KANSL2Q9H9L4 492 aa10.64□□□□□ -0.71
CKAP2-205ENST00000468284 SLC38A10Q9HBR0 1119 aa10.64□□□□□ -0.71
CKAP2-205ENST00000468284 MRS2Q9HD23 443 aa10.64□□□□□ -0.71
CKAP2-205ENST00000468284 Q9Y3F1 56 aa10.64□□□□□ -0.71
CKAP2-205ENST00000468284 ATG2AQ2TAZ0 1938 aa10.63□□□□□ -0.71
CKAP2-205ENST00000468284 PRR23AA6NEV1 266 aa10.63□□□□□ -0.71
CKAP2-205ENST00000468284 STXBP3O00186 592 aa10.63□□□□□ -0.71
CKAP2-205ENST00000468284 LINC01565O15544 149 aa10.63□□□□□ -0.71
CKAP2-205ENST00000468284 ZBED4O75132 1171 aa10.63□□□□□ -0.71
CKAP2-205ENST00000468284 TBX10O75333 385 aa10.63□□□□□ -0.71
CKAP2-205ENST00000468284 LEFTY1O75610 366 aa10.63□□□□□ -0.71
CKAP2-205ENST00000468284 PDGFBP01127 241 aaPredicted RBP10.63□□□□□ -0.71
CKAP2-205ENST00000468284 CHGBP05060 677 aa10.63□□□□□ -0.71
CKAP2-205ENST00000468284 CD8BP10966 210 aa10.63□□□□□ -0.71
CKAP2-205ENST00000468284 FUT4P22083 530 aa10.63□□□□□ -0.71
CKAP2-205ENST00000468284 AVPR2P30518 371 aa10.63□□□□□ -0.71
CKAP2-205ENST00000468284 ZXDAP98168 799 aa10.63□□□□□ -0.71
CKAP2-205ENST00000468284 CHST13Q8NET6 341 aa10.63□□□□□ -0.71
CKAP2-205ENST00000468284 DHX38Q92620 1227 aaKnown RBP10.63□□□□□ -0.71
CKAP2-205ENST00000468284 CHMP4CQ96CF2 233 aa10.63□□□□□ -0.71
CKAP2-205ENST00000468284 CRBNQ96SW2 442 aa10.63□□□□□ -0.71
CKAP2-205ENST00000468284 MTG1Q9BT17 334 aaPredicted RBP10.63□□□□□ -0.71
CKAP2-205ENST00000468284 FSD1Q9BTV5 496 aa10.63□□□□□ -0.71
CKAP2-205ENST00000468284 DUSP23Q9BVJ7 150 aa10.63□□□□□ -0.71
CKAP2-205ENST00000468284 CRNKL1Q9BZJ0 848 aaKnown RBP10.63□□□□□ -0.71
CKAP2-205ENST00000468284 GPR108Q9NPR9 543 aa10.63□□□□□ -0.71
CKAP2-205ENST00000468284 VAV3Q9UKW4 847 aa10.63□□□□□ -0.71
CKAP2-205ENST00000468284 HDAC5Q9UQL6 1122 aa10.63□□□□□ -0.71
CKAP2-205ENST00000468284 TNNQ9UQP3 1299 aa10.63□□□□□ -0.71
CKAP2-205ENST00000468284 FAM50BQ9Y247 325 aa10.63□□□□□ -0.71
CKAP2-205ENST00000468284 U3KQE9 123 aa10.63□□□□□ -0.71
CKAP2-205ENST00000468284 DNAH14Q0VDD8 3507 aa10.63□□□□□ -0.71
CKAP2-205ENST00000468284 ARID1BQ8NFD5 2236 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms