RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 EHHADHQ08426 723 aa16.77■□□□□ 0.28
SNIP1-202ENST00000468040 PSMD2Q13200 908 aa16.77■□□□□ 0.28
SNIP1-202ENST00000468040 KMT5BQ4FZB7 885 aa16.77■□□□□ 0.28
SNIP1-202ENST00000468040 FAM26FQ5R3K3 315 aa16.77■□□□□ 0.28
SNIP1-202ENST00000468040 STXBP4Q6ZWJ1 553 aa16.77■□□□□ 0.28
SNIP1-202ENST00000468040 SPATA20Q8TB22 786 aa16.77■□□□□ 0.28
SNIP1-202ENST00000468040 KCNN1Q92952 543 aa16.77■□□□□ 0.28
SNIP1-202ENST00000468040 ZNF668Q96K58 619 aaPredicted RBP16.77■□□□□ 0.28
SNIP1-202ENST00000468040 WNT8AQ9H1J5 351 aa16.77■□□□□ 0.28
SNIP1-202ENST00000468040 ST6GALNAC4Q9H4F1 302 aa16.77■□□□□ 0.28
SNIP1-202ENST00000468040 MRPL44Q9H9J2 332 aaKnown RBP16.77■□□□□ 0.28
SNIP1-202ENST00000468040 ARHGAP28Q9P2N2 729 aa16.77■□□□□ 0.28
SNIP1-202ENST00000468040 PCDHA5Q9Y5H7 936 aa16.77■□□□□ 0.28
SNIP1-202ENST00000468040 INO80B-WBP1J3KQ70 363 aa16.76■□□□□ 0.27
SNIP1-202ENST00000468040 SLC16A4O15374 487 aa16.76■□□□□ 0.27
SNIP1-202ENST00000468040 RHOBTB3O94955 611 aa16.76■□□□□ 0.27
SNIP1-202ENST00000468040 SFPQP23246 707 aaKnown RBP eCLIP16.76■□□□□ 0.27
SNIP1-202ENST00000468040 RGS19P49795 217 aa16.76■□□□□ 0.27
SNIP1-202ENST00000468040 CCL23P55773 120 aa16.76■□□□□ 0.27
SNIP1-202ENST00000468040 ALCAMQ13740 583 aa16.76■□□□□ 0.27
SNIP1-202ENST00000468040 MAPK6Q16659 721 aa16.76■□□□□ 0.27
SNIP1-202ENST00000468040 FBXO47Q5MNV8 452 aa16.76■□□□□ 0.27
SNIP1-202ENST00000468040 CCDC183Q5T5S1 534 aa16.76■□□□□ 0.27
SNIP1-202ENST00000468040 NT5DC1Q5TFE4 455 aa16.76■□□□□ 0.27
SNIP1-202ENST00000468040 MFSD5Q6N075 450 aa16.76■□□□□ 0.27
SNIP1-202ENST00000468040 TSHZ1Q6ZSZ6 1077 aa16.76■□□□□ 0.27
SNIP1-202ENST00000468040 FAM43BQ6ZT52 329 aaPredicted RBP16.76■□□□□ 0.27
SNIP1-202ENST00000468040 TMEM199Q8N511 208 aa16.76■□□□□ 0.27
SNIP1-202ENST00000468040 TMEM161BQ8NDZ6 487 aa16.76■□□□□ 0.27
SNIP1-202ENST00000468040 TMEM40Q8WWA1 233 aa16.76■□□□□ 0.27
SNIP1-202ENST00000468040 KIFC3Q9BVG8 833 aa16.76■□□□□ 0.27
SNIP1-202ENST00000468040 GTPBP4Q9BZE4 634 aaKnown RBP16.76■□□□□ 0.27
SNIP1-202ENST00000468040 TMEM134Q9H6X4 195 aa16.76■□□□□ 0.27
SNIP1-202ENST00000468040 CDHR5Q9HBB8 845 aa16.76■□□□□ 0.27
SNIP1-202ENST00000468040 MKI67P46013 3256 aaKnown RBP16.76■□□□□ 0.27
SNIP1-202ENST00000468040 ADGRA3Q8IWK6 1321 aa16.75■□□□□ 0.27
SNIP1-202ENST00000468040 K7ERI5 159 aa16.75■□□□□ 0.27
SNIP1-202ENST00000468040 GPR182O15218 404 aa16.75■□□□□ 0.27
SNIP1-202ENST00000468040 RPS6KA5O75582 802 aa16.75■□□□□ 0.27
SNIP1-202ENST00000468040 ERLIN2O94905 339 aa16.75■□□□□ 0.27
SNIP1-202ENST00000468040 GHRP10912 638 aa16.75■□□□□ 0.27
SNIP1-202ENST00000468040 SARSP49591 514 aaKnown RBP16.75■□□□□ 0.27
SNIP1-202ENST00000468040 MBTD1Q05BQ5 628 aa16.75■□□□□ 0.27
SNIP1-202ENST00000468040 LPIN1Q14693 890 aa16.75■□□□□ 0.27
SNIP1-202ENST00000468040 ZNF720Q7Z2F6 126 aa16.75■□□□□ 0.27
SNIP1-202ENST00000468040 HAUS6Q7Z4H7 955 aa16.75■□□□□ 0.27
SNIP1-202ENST00000468040 ERCC4Q92889 916 aaPredicted RBP16.75■□□□□ 0.27
SNIP1-202ENST00000468040 HVCN1Q96D96 273 aa16.75■□□□□ 0.27
SNIP1-202ENST00000468040 FIZ1Q96SL8 496 aa16.75■□□□□ 0.27
SNIP1-202ENST00000468040 PRMT7Q9NVM4 692 aaPredicted RBP16.75■□□□□ 0.27
SNIP1-202ENST00000468040 TBC1D7Q9P0N9 293 aa16.75■□□□□ 0.27
SNIP1-202ENST00000468040 KIAA1468Q9P260 1216 aa16.75■□□□□ 0.27
SNIP1-202ENST00000468040 PCDHB13Q9Y5F0 798 aa16.75■□□□□ 0.27
SNIP1-202ENST00000468040 SIP14410 1827 aa16.75■□□□□ 0.27
SNIP1-202ENST00000468040 DENND3A2RUS2 1198 aa16.74■□□□□ 0.27
SNIP1-202ENST00000468040 GCNT3O95395 438 aa16.74■□□□□ 0.27
SNIP1-202ENST00000468040 PFKMP08237 780 aa16.74■□□□□ 0.27
SNIP1-202ENST00000468040 ITGB8P26012 769 aa16.74■□□□□ 0.27
SNIP1-202ENST00000468040 NMT1P30419 496 aaKnown RBP16.74■□□□□ 0.27
SNIP1-202ENST00000468040 GTF2BQ00403 316 aa16.74■□□□□ 0.27
SNIP1-202ENST00000468040 NCBP1Q09161 790 aaKnown RBP16.74■□□□□ 0.27
SNIP1-202ENST00000468040 STRN3Q13033 797 aa16.74■□□□□ 0.27
SNIP1-202ENST00000468040 PAK2Q13177 524 aa16.74■□□□□ 0.27
SNIP1-202ENST00000468040 MBTPS1Q14703 1052 aa16.74■□□□□ 0.27
SNIP1-202ENST00000468040 FAM187BQ17R55 369 aa16.74■□□□□ 0.27
SNIP1-202ENST00000468040 CAVIN1Q6NZI2 390 aaKnown RBP16.74■□□□□ 0.27
SNIP1-202ENST00000468040 HPS3Q969F9 1004 aa16.74■□□□□ 0.27
SNIP1-202ENST00000468040 SCLYQ96I15 445 aa16.74■□□□□ 0.27
SNIP1-202ENST00000468040 PRIMPOLQ96LW4 560 aa16.74■□□□□ 0.27
SNIP1-202ENST00000468040 CCDC113Q9H0I3 377 aa16.74■□□□□ 0.27
SNIP1-202ENST00000468040 FZD8Q9H461 694 aa16.74■□□□□ 0.27
SNIP1-202ENST00000468040 MINDY3Q9H8M7 445 aa16.74■□□□□ 0.27
SNIP1-202ENST00000468040 NOC2LQ9Y3T9 749 aaKnown RBP16.74■□□□□ 0.27
SNIP1-202ENST00000468040 EIF3DO15371 548 aaKnown RBP eCLIP16.73■□□□□ 0.27
SNIP1-202ENST00000468040 NBNO60934 754 aa16.73■□□□□ 0.27
SNIP1-202ENST00000468040 CAPN15O75808 1086 aa16.73■□□□□ 0.27
SNIP1-202ENST00000468040 PPP1R37O75864 691 aa16.73■□□□□ 0.27
SNIP1-202ENST00000468040 CXCL10P02778 98 aa16.73■□□□□ 0.27
SNIP1-202ENST00000468040 PRKCBP05771 671 aa16.73■□□□□ 0.27
SNIP1-202ENST00000468040 CATSPER4Q7RTX7 472 aa16.73■□□□□ 0.27
SNIP1-202ENST00000468040 FAM228AQ86W67 206 aa16.73■□□□□ 0.27
SNIP1-202ENST00000468040 TRIML1Q8N9V2 468 aa16.73■□□□□ 0.27
SNIP1-202ENST00000468040 APBB2Q92870 758 aa16.73■□□□□ 0.27
SNIP1-202ENST00000468040 LBHD1Q9BQE6 289 aaPredicted RBP16.73■□□□□ 0.27
SNIP1-202ENST00000468040 IFIH1Q9BYX4 1025 aaKnown RBP16.73■□□□□ 0.27
SNIP1-202ENST00000468040 AGO3Q9H9G7 860 aaKnown RBP16.73■□□□□ 0.27
SNIP1-202ENST00000468040 TMEM63CQ9P1W3 806 aa16.73■□□□□ 0.27
SNIP1-202ENST00000468040 MAN1B1Q9UKM7 699 aa16.73■□□□□ 0.27
SNIP1-202ENST00000468040 ZMYND8Q9ULU4 1186 aaPredicted RBP16.73■□□□□ 0.27
SNIP1-202ENST00000468040 UBE4BO95155 1302 aa16.72■□□□□ 0.27
SNIP1-202ENST00000468040 ACKR2O00590 384 aa16.72■□□□□ 0.27
SNIP1-202ENST00000468040 CSDE1O75534 798 aaKnown RBP16.72■□□□□ 0.27
SNIP1-202ENST00000468040 KIF20AO95235 890 aa16.72■□□□□ 0.27
SNIP1-202ENST00000468040 MYBP10242 640 aa16.72■□□□□ 0.27
SNIP1-202ENST00000468040 CSF2RAP15509 400 aa16.72■□□□□ 0.27
SNIP1-202ENST00000468040 SYN1P17600 705 aa16.72■□□□□ 0.27
SNIP1-202ENST00000468040 AXLP30530 894 aa16.72■□□□□ 0.27
SNIP1-202ENST00000468040 CD52P31358 61 aa16.72■□□□□ 0.27
SNIP1-202ENST00000468040 CASP5P51878 434 aa16.72■□□□□ 0.27
SNIP1-202ENST00000468040 NFX1Q12986 1120 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms