RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 RMND1Q9NWS8 449 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 TBC1D7Q9P0N9 293 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 SEL1LQ9UBV2 794 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 GTF2IRD1Q9UHL9 959 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 KCNG1Q9UIX4 513 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 MAPK8IP1Q9UQF2 711 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 GDAQ9Y2T3 454 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 COL1A2P08123 1366 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 A0A1W2PQ45 241 aaPredicted RBP6.57□□□□□ -1.36
USP39-213ENST00000467885 A0A1W2PQY0 241 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 C17orf102A2RUQ5 167 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 RBAK-RBAKDNI3L0D1 243 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 SLC16A4O15374 487 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 TGFB1I1O43294 461 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 PRPF6O94906 941 aaKnown RBP6.57□□□□□ -1.36
USP39-213ENST00000467885 FAM13AO94988 1023 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 KRT18P05783 430 aaKnown RBP6.57□□□□□ -1.36
USP39-213ENST00000467885 IQCF3P0C7M6 154 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 SRGAP2CP0DJJ0 459 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 CCDC192P0DO97 292 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 GNAT1P11488 350 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 CAPN2P17655 700 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 ERCC5P28715 1186 aaPredicted RBP6.57□□□□□ -1.36
USP39-213ENST00000467885 DNM2P50570 870 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 PMS1P54277 932 aaKnown RBP6.57□□□□□ -1.36
USP39-213ENST00000467885 NCKAP1LP55160 1127 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 CDC42EP1Q00587 391 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 MXD4Q14582 209 aaPredicted RBP6.57□□□□□ -1.36
USP39-213ENST00000467885 NCAPHQ15003 741 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 EMC2Q15006 297 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 TRIM71Q2Q1W2 868 aaKnown RBP6.57□□□□□ -1.36
USP39-213ENST00000467885 FAM26FQ5R3K3 315 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 ANKRD40Q6AI12 368 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 SLC39A5Q6ZMH5 540 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 TAS1R3Q7RTX0 852 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 SERINC5Q86VE9 423 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 IRF2BP1Q8IU81 584 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 GUF1Q8N442 669 aaKnown RBP6.57□□□□□ -1.36
USP39-213ENST00000467885 METTL13Q8N6R0 699 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 RETREG2Q8NC44 543 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 DNAJB3Q8WWF6 145 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 TCP11Q8WWU5 503 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 WNT8BQ93098 351 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 DHTKD1Q96HY7 919 aaPredicted RBP6.57□□□□□ -1.36
USP39-213ENST00000467885 DRC1Q96MC2 740 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 GLT1D1Q96MS3 346 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 JPH2Q9BR39 696 aaPredicted RBP6.57□□□□□ -1.36
USP39-213ENST00000467885 KATNAL1Q9BW62 490 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 GTPBP4Q9BZE4 634 aaKnown RBP6.57□□□□□ -1.36
USP39-213ENST00000467885 OSBPL7Q9BZF2 842 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 SENP6Q9GZR1 1112 aaPredicted RBP6.57□□□□□ -1.36
USP39-213ENST00000467885 TRPV6Q9H1D0 765 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 POLR3FQ9H1D9 316 aaPredicted RBP6.57□□□□□ -1.36
USP39-213ENST00000467885 DNAJC25Q9H1X3 360 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 IKZF4Q9H2S9 585 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 KCTD10Q9H3F6 313 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 FZD8Q9H461 694 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 ZHX3Q9H4I2 956 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 TMEM134Q9H6X4 195 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 MRPL44Q9H9J2 332 aaKnown RBP6.57□□□□□ -1.36
USP39-213ENST00000467885 ATP6V0A4Q9HBG4 840 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 IFT122Q9HBG6 1241 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 LARSQ9P2J5 1176 aaKnown RBP6.57□□□□□ -1.36
USP39-213ENST00000467885 MGAMO43451 1857 aa6.57□□□□□ -1.36
USP39-213ENST00000467885 HTTP42858 3142 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 KIAA1217Q5T5P2 1943 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 PLXNA1Q9UIW2 1896 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 A0A087WZ62 844 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 LRRC10BA6NIK2 292 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 CCDC169A6NNP5 214 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 ANKRD63C9JTQ0 380 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 K7ERI5 159 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 GAS2O43903 313 aaKnown RBP6.56□□□□□ -1.36
USP39-213ENST00000467885 CD4P01730 458 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 CHRNA1P02708 482 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 VTNP04004 478 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 MYBP10242 640 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 CYP2C9P11712 490 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 EN2P19622 333 aaPredicted RBP6.56□□□□□ -1.36
USP39-213ENST00000467885 TMOD1P28289 359 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 NAMPTP43490 491 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 ZNF165P49910 485 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 CLCN3P51790 818 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 SMTNP53814 917 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 NLRP11P59045 1033 aaKnown RBP6.56□□□□□ -1.36
USP39-213ENST00000467885 MCCD1P59942 119 aaPredicted RBP6.56□□□□□ -1.36
USP39-213ENST00000467885 PTENP60484 403 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 CAPSQ13938 189 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 GPNMBQ14956 572 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 PTGISQ16647 500 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 KNOP1Q1ED39 458 aaKnown RBP6.56□□□□□ -1.36
USP39-213ENST00000467885 BMT2Q1RMZ1 405 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 ANO6Q4KMQ2 910 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 FAM26DQ5JW98 314 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 C1orf53Q5VUE5 145 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 TTI2Q6NXR4 508 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 C11orf57Q6ZUT1 292 aaPredicted RBP6.56□□□□□ -1.36
USP39-213ENST00000467885 UBE2Q1Q7Z7E8 422 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 RHPN2Q8IUC4 686 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 DHX40Q8IX18 779 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms