RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 SKIP12755 728 aa23.58■■□□□ 1.37
COL9A3-207ENST00000467819 POLGP54098 1239 aaPredicted RBP23.58■■□□□ 1.37
COL9A3-207ENST00000467819 ZXDAP98168 799 aa23.58■■□□□ 1.37
COL9A3-207ENST00000467819 GLB1LQ6UWU2 654 aa23.58■■□□□ 1.37
COL9A3-207ENST00000467819 TRIM67Q6ZTA4 783 aa23.58■■□□□ 1.37
COL9A3-207ENST00000467819 TMEM173Q86WV6 379 aaPredicted RBP23.58■■□□□ 1.37
COL9A3-207ENST00000467819 POTEDQ86YR6 584 aa23.58■■□□□ 1.37
COL9A3-207ENST00000467819 MRPL43Q8N983 215 aaKnown RBP23.58■■□□□ 1.37
COL9A3-207ENST00000467819 CASP10Q92851 521 aa23.58■■□□□ 1.37
COL9A3-207ENST00000467819 CDH22Q9UJ99 828 aa23.58■■□□□ 1.37
COL9A3-207ENST00000467819 HCFC2Q9Y5Z7 792 aa23.58■■□□□ 1.37
COL9A3-207ENST00000467819 ZDBF2Q9HCK1 2354 aa23.58■■□□□ 1.37
COL9A3-207ENST00000467819 MYO10Q9HD67 2058 aa23.57■■□□□ 1.36
COL9A3-207ENST00000467819 TMEM221A6NGB7 291 aa23.57■■□□□ 1.36
COL9A3-207ENST00000467819 M0R296 226 aa23.57■■□□□ 1.36
COL9A3-207ENST00000467819 NOMO2Q5JPE7 1267 aa23.57■■□□□ 1.36
COL9A3-207ENST00000467819 EARS2Q5JPH6 523 aaKnown RBP23.57■■□□□ 1.36
COL9A3-207ENST00000467819 NCAPH2Q6IBW4 605 aa23.57■■□□□ 1.36
COL9A3-207ENST00000467819 HAS1Q92839 578 aa23.57■■□□□ 1.36
COL9A3-207ENST00000467819 TMEM143Q96AN5 459 aa23.57■■□□□ 1.36
COL9A3-207ENST00000467819 LXNQ9BS40 222 aa23.57■■□□□ 1.36
COL9A3-207ENST00000467819 GBP3Q9H0R5 595 aa23.57■■□□□ 1.36
COL9A3-207ENST00000467819 IFT122Q9HBG6 1241 aa23.57■■□□□ 1.36
COL9A3-207ENST00000467819 TBC1D13Q9NVG8 400 aa23.57■■□□□ 1.36
COL9A3-207ENST00000467819 ORC3Q9UBD5 711 aaPredicted RBP23.57■■□□□ 1.36
COL9A3-207ENST00000467819 KMT2EQ8IZD2 1858 aa23.56■■□□□ 1.36
COL9A3-207ENST00000467819 FAM205CA6NFA0 338 aa23.56■■□□□ 1.36
COL9A3-207ENST00000467819 CLASP2O75122 1294 aaKnown RBP23.56■■□□□ 1.36
COL9A3-207ENST00000467819 CTDNEP1O95476 244 aa23.56■■□□□ 1.36
COL9A3-207ENST00000467819 CXCL14O95715 111 aa23.56■■□□□ 1.36
COL9A3-207ENST00000467819 SRGAP2CP0DJJ0 459 aa23.56■■□□□ 1.36
COL9A3-207ENST00000467819 HOXB8P17481 243 aaPredicted RBP23.56■■□□□ 1.36
COL9A3-207ENST00000467819 RAB27AP51159 221 aa23.56■■□□□ 1.36
COL9A3-207ENST00000467819 RNASELQ05823 741 aaKnown RBP23.56■■□□□ 1.36
COL9A3-207ENST00000467819 BMS1Q14692 1282 aaKnown RBP23.56■■□□□ 1.36
COL9A3-207ENST00000467819 ALYREFQ86V81 257 aaKnown RBP23.56■■□□□ 1.36
COL9A3-207ENST00000467819 VPS52Q8N1B4 723 aa23.56■■□□□ 1.36
COL9A3-207ENST00000467819 PSPC1Q8WXF1 523 aaKnown RBP23.56■■□□□ 1.36
COL9A3-207ENST00000467819 AUTS2Q8WXX7 1259 aa23.56■■□□□ 1.36
COL9A3-207ENST00000467819 PBXIP1Q96AQ6 731 aa23.56■■□□□ 1.36
COL9A3-207ENST00000467819 DYDC2Q96IM9 177 aa23.56■■□□□ 1.36
COL9A3-207ENST00000467819 NAP1L4Q99733 375 aaKnown RBP23.56■■□□□ 1.36
COL9A3-207ENST00000467819 KCNH6Q9H252 994 aa23.56■■□□□ 1.36
COL9A3-207ENST00000467819 DHX33Q9H6R0 707 aaKnown RBP23.56■■□□□ 1.36
COL9A3-207ENST00000467819 NRDE2Q9H7Z3 1164 aa23.56■■□□□ 1.36
COL9A3-207ENST00000467819 AGPAT5Q9NUQ2 364 aa23.56■■□□□ 1.36
COL9A3-207ENST00000467819 RGL1Q9NZL6 768 aa23.56■■□□□ 1.36
COL9A3-207ENST00000467819 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.55■■□□□ 1.36
COL9A3-207ENST00000467819 TBX3O15119 743 aa23.55■■□□□ 1.36
COL9A3-207ENST00000467819 OFD1O75665 1012 aa23.55■■□□□ 1.36
COL9A3-207ENST00000467819 RFC5P40937 340 aa23.55■■□□□ 1.36
COL9A3-207ENST00000467819 EPHA7Q15375 998 aa23.55■■□□□ 1.36
COL9A3-207ENST00000467819 TPRNQ4KMQ1 711 aa23.55■■□□□ 1.36
COL9A3-207ENST00000467819 PRPF31Q8WWY3 499 aaKnown RBP23.55■■□□□ 1.36
COL9A3-207ENST00000467819 RSPH1Q8WYR4 309 aa23.55■■□□□ 1.36
COL9A3-207ENST00000467819 ZBP1Q9H171 429 aa23.55■■□□□ 1.36
COL9A3-207ENST00000467819 MINDY3Q9H8M7 445 aa23.55■■□□□ 1.36
COL9A3-207ENST00000467819 TSHZ2Q9NRE2 1034 aa23.55■■□□□ 1.36
COL9A3-207ENST00000467819 DNAJB4Q9UDY4 337 aa23.55■■□□□ 1.36
COL9A3-207ENST00000467819 PCDHB2Q9Y5E7 798 aa23.55■■□□□ 1.36
COL9A3-207ENST00000467819 ZNF623O75123 536 aa23.54■■□□□ 1.36
COL9A3-207ENST00000467819 NEFLP07196 543 aa23.54■■□□□ 1.36
COL9A3-207ENST00000467819 YWHABP31946 246 aaKnown RBP23.54■■□□□ 1.36
COL9A3-207ENST00000467819 AK2P54819 239 aa23.54■■□□□ 1.36
COL9A3-207ENST00000467819 NHLH1Q02575 133 aa23.54■■□□□ 1.36
COL9A3-207ENST00000467819 CYP4A11Q02928 519 aa23.54■■□□□ 1.36
COL9A3-207ENST00000467819 LAMTOR4Q0VGL1 99 aa23.54■■□□□ 1.36
COL9A3-207ENST00000467819 NR5A1Q13285 461 aa23.54■■□□□ 1.36
COL9A3-207ENST00000467819 CTTNQ14247 550 aaKnown RBP23.54■■□□□ 1.36
COL9A3-207ENST00000467819 C4orf19Q8IY42 314 aa23.54■■□□□ 1.36
COL9A3-207ENST00000467819 EXOC8Q8IYI6 725 aa23.54■■□□□ 1.36
COL9A3-207ENST00000467819 TMEM87AQ8NBN3 555 aa23.54■■□□□ 1.36
COL9A3-207ENST00000467819 BCL7CQ8WUZ0 217 aaPredicted RBP23.54■■□□□ 1.36
COL9A3-207ENST00000467819 PGBD4Q96DM1 585 aa23.54■■□□□ 1.36
COL9A3-207ENST00000467819 IGSF21Q96ID5 467 aa23.54■■□□□ 1.36
COL9A3-207ENST00000467819 PPME1Q9Y570 386 aa23.54■■□□□ 1.36
COL9A3-207ENST00000467819 TDRD15B5MCY1 1934 aaKnown RBP23.53■■□□□ 1.36
COL9A3-207ENST00000467819 ZBTB39O15060 712 aa23.53■■□□□ 1.36
COL9A3-207ENST00000467819 BAG4O95429 457 aaKnown RBP23.53■■□□□ 1.36
COL9A3-207ENST00000467819 GALTP07902 379 aa23.53■■□□□ 1.36
COL9A3-207ENST00000467819 KRT2P35908 639 aa23.53■■□□□ 1.36
COL9A3-207ENST00000467819 EMC2Q15006 297 aa23.53■■□□□ 1.36
COL9A3-207ENST00000467819 ANKRD1Q15327 319 aa23.53■■□□□ 1.36
COL9A3-207ENST00000467819 XKR9Q5GH70 373 aa23.53■■□□□ 1.36
COL9A3-207ENST00000467819 CES5AQ6NT32 575 aa23.53■■□□□ 1.36
COL9A3-207ENST00000467819 AGMOQ6ZNB7 445 aa23.53■■□□□ 1.36
COL9A3-207ENST00000467819 OTUD6AQ7L8S5 288 aa23.53■■□□□ 1.36
COL9A3-207ENST00000467819 BMP8AQ7Z5Y6 402 aa23.53■■□□□ 1.36
COL9A3-207ENST00000467819 SRGAP1Q7Z6B7 1085 aa23.53■■□□□ 1.36
COL9A3-207ENST00000467819 NECAB1Q8N987 351 aa23.53■■□□□ 1.36
COL9A3-207ENST00000467819 WASF1Q92558 559 aa23.53■■□□□ 1.36
COL9A3-207ENST00000467819 B4GALT3O60512 393 aa23.52■■□□□ 1.36
COL9A3-207ENST00000467819 SLC11A1P49279 550 aa23.52■■□□□ 1.36
COL9A3-207ENST00000467819 SPIRE1Q08AE8 756 aa23.52■■□□□ 1.36
COL9A3-207ENST00000467819 SIGLEC14Q08ET2 396 aa23.52■■□□□ 1.36
COL9A3-207ENST00000467819 PTPN21Q16825 1174 aa23.52■■□□□ 1.36
COL9A3-207ENST00000467819 ZBTB33Q86T24 672 aa23.52■■□□□ 1.36
COL9A3-207ENST00000467819 DDX53Q86TM3 631 aaKnown RBP23.52■■□□□ 1.36
COL9A3-207ENST00000467819 ZNF280BQ86YH2 543 aa23.52■■□□□ 1.36
COL9A3-207ENST00000467819 SLFN12Q8IYM2 578 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms