RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 OLFML3Q9NRN5 406 aa18.84■□□□□ 0.61
VARS2-204ENST00000467717 KAT6AQ92794 2004 aa18.84■□□□□ 0.61
VARS2-204ENST00000467717 H0YCG3 227 aa18.83■□□□□ 0.6
VARS2-204ENST00000467717 SLC16A4O15374 487 aa18.83■□□□□ 0.6
VARS2-204ENST00000467717 RPS6KA5O75582 802 aa18.83■□□□□ 0.6
VARS2-204ENST00000467717 GHRP10912 638 aa18.83■□□□□ 0.6
VARS2-204ENST00000467717 SCP2P22307 547 aa18.83■□□□□ 0.6
VARS2-204ENST00000467717 EFNA5P52803 228 aa18.83■□□□□ 0.6
VARS2-204ENST00000467717 NCKAP1LP55160 1127 aa18.83■□□□□ 0.6
VARS2-204ENST00000467717 LPIN1Q14693 890 aa18.83■□□□□ 0.6
VARS2-204ENST00000467717 NFKBIBQ15653 356 aa18.83■□□□□ 0.6
VARS2-204ENST00000467717 CHRDL2Q6WN34 429 aa18.83■□□□□ 0.6
VARS2-204ENST00000467717 SPATA20Q8TB22 786 aa18.83■□□□□ 0.6
VARS2-204ENST00000467717 SCLYQ96I15 445 aa18.83■□□□□ 0.6
VARS2-204ENST00000467717 FIZ1Q96SL8 496 aa18.83■□□□□ 0.6
VARS2-204ENST00000467717 MRPL44Q9H9J2 332 aaKnown RBP18.83■□□□□ 0.6
VARS2-204ENST00000467717 EXOC1Q9NV70 894 aa18.83■□□□□ 0.6
VARS2-204ENST00000467717 ARHGAP28Q9P2N2 729 aa18.83■□□□□ 0.6
VARS2-204ENST00000467717 ZMYND8Q9ULU4 1186 aaPredicted RBP18.83■□□□□ 0.6
VARS2-204ENST00000467717 PHLPP2Q6ZVD8 1323 aa18.82■□□□□ 0.6
VARS2-204ENST00000467717 ADGRA3Q8IWK6 1321 aa18.82■□□□□ 0.6
VARS2-204ENST00000467717 INO80B-WBP1J3KQ70 363 aa18.82■□□□□ 0.6
VARS2-204ENST00000467717 K7ENM7 598 aa18.82■□□□□ 0.6
VARS2-204ENST00000467717 SYN1P17600 705 aa18.82■□□□□ 0.6
VARS2-204ENST00000467717 SFPQP23246 707 aaKnown RBP eCLIP18.82■□□□□ 0.6
VARS2-204ENST00000467717 ABCD1P33897 745 aa18.82■□□□□ 0.6
VARS2-204ENST00000467717 MBTD1Q05BQ5 628 aa18.82■□□□□ 0.6
VARS2-204ENST00000467717 EHHADHQ08426 723 aa18.82■□□□□ 0.6
VARS2-204ENST00000467717 KCNB1Q14721 858 aa18.82■□□□□ 0.6
VARS2-204ENST00000467717 PCBP1Q15365 356 aaKnown RBP eCLIP18.82■□□□□ 0.6
VARS2-204ENST00000467717 KLHL40Q2TBA0 621 aa18.82■□□□□ 0.6
VARS2-204ENST00000467717 KMT5BQ4FZB7 885 aa18.82■□□□□ 0.6
VARS2-204ENST00000467717 FAM26FQ5R3K3 315 aa18.82■□□□□ 0.6
VARS2-204ENST00000467717 TSHZ1Q6ZSZ6 1077 aa18.82■□□□□ 0.6
VARS2-204ENST00000467717 ZNF720Q7Z2F6 126 aa18.82■□□□□ 0.6
VARS2-204ENST00000467717 HAUS6Q7Z4H7 955 aa18.82■□□□□ 0.6
VARS2-204ENST00000467717 TMEM161BQ8NDZ6 487 aa18.82■□□□□ 0.6
VARS2-204ENST00000467717 KCNN1Q92952 543 aa18.82■□□□□ 0.6
VARS2-204ENST00000467717 SMARCE1Q969G3 411 aa18.82■□□□□ 0.6
VARS2-204ENST00000467717 GSDMAQ96QA5 445 aa18.82■□□□□ 0.6
VARS2-204ENST00000467717 RMND1Q9NWS8 449 aa18.82■□□□□ 0.6
VARS2-204ENST00000467717 NOC2LQ9Y3T9 749 aaKnown RBP18.82■□□□□ 0.6
VARS2-204ENST00000467717 PCDHA5Q9Y5H7 936 aa18.82■□□□□ 0.6
VARS2-204ENST00000467717 DENND3A2RUS2 1198 aa18.81■□□□□ 0.6
VARS2-204ENST00000467717 GPR182O15218 404 aa18.81■□□□□ 0.6
VARS2-204ENST00000467717 NBNO60934 754 aa18.81■□□□□ 0.6
VARS2-204ENST00000467717 CSDE1O75534 798 aaKnown RBP18.81■□□□□ 0.6
VARS2-204ENST00000467717 RHOBTB3O94955 611 aa18.81■□□□□ 0.6
VARS2-204ENST00000467717 CXCL10P02778 98 aa18.81■□□□□ 0.6
VARS2-204ENST00000467717 NMT1P30419 496 aaKnown RBP18.81■□□□□ 0.6
VARS2-204ENST00000467717 PSMD2Q13200 908 aa18.81■□□□□ 0.6
VARS2-204ENST00000467717 GPNMBQ14956 572 aa18.81■□□□□ 0.6
VARS2-204ENST00000467717 MAPK6Q16659 721 aa18.81■□□□□ 0.6
VARS2-204ENST00000467717 SKOR2Q2VWA4 1001 aaPredicted RBP18.81■□□□□ 0.6
VARS2-204ENST00000467717 NT5DC1Q5TFE4 455 aa18.81■□□□□ 0.6
VARS2-204ENST00000467717 FAM228AQ86W67 206 aa18.81■□□□□ 0.6
VARS2-204ENST00000467717 ERCC4Q92889 916 aaPredicted RBP18.81■□□□□ 0.6
VARS2-204ENST00000467717 OSBPL7Q9BZF2 842 aa18.81■□□□□ 0.6
VARS2-204ENST00000467717 FZD8Q9H461 694 aa18.81■□□□□ 0.6
VARS2-204ENST00000467717 ST6GALNAC4Q9H4F1 302 aa18.81■□□□□ 0.6
VARS2-204ENST00000467717 TMEM134Q9H6X4 195 aa18.81■□□□□ 0.6
VARS2-204ENST00000467717 MINDY3Q9H8M7 445 aa18.81■□□□□ 0.6
VARS2-204ENST00000467717 AGO3Q9H9G7 860 aaKnown RBP18.81■□□□□ 0.6
VARS2-204ENST00000467717 TBC1D7Q9P0N9 293 aa18.81■□□□□ 0.6
VARS2-204ENST00000467717 TRIP12Q14669 1992 aaPredicted RBP18.81■□□□□ 0.6
VARS2-204ENST00000467717 LOXHD1Q8IVV2 1947 aa18.8■□□□□ 0.6
VARS2-204ENST00000467717 K7ERI5 159 aa18.8■□□□□ 0.6
VARS2-204ENST00000467717 CSF2RAP15509 400 aa18.8■□□□□ 0.6
VARS2-204ENST00000467717 CD52P31358 61 aa18.8■□□□□ 0.6
VARS2-204ENST00000467717 SARSP49591 514 aaKnown RBP18.8■□□□□ 0.6
VARS2-204ENST00000467717 PAK2Q13177 524 aa18.8■□□□□ 0.6
VARS2-204ENST00000467717 ALCAMQ13740 583 aa18.8■□□□□ 0.6
VARS2-204ENST00000467717 CATSPER4Q7RTX7 472 aa18.8■□□□□ 0.6
VARS2-204ENST00000467717 BADQ92934 168 aa18.8■□□□□ 0.6
VARS2-204ENST00000467717 HPS3Q969F9 1004 aa18.8■□□□□ 0.6
VARS2-204ENST00000467717 PRIMPOLQ96LW4 560 aa18.8■□□□□ 0.6
VARS2-204ENST00000467717 CCDC113Q9H0I3 377 aa18.8■□□□□ 0.6
VARS2-204ENST00000467717 PRMT7Q9NVM4 692 aaPredicted RBP18.8■□□□□ 0.6
VARS2-204ENST00000467717 KIAA1468Q9P260 1216 aa18.8■□□□□ 0.6
VARS2-204ENST00000467717 PADI3Q9ULW8 664 aa18.8■□□□□ 0.6
VARS2-204ENST00000467717 ST3GAL5Q9UNP4 418 aa18.8■□□□□ 0.6
VARS2-204ENST00000467717 PCDHB13Q9Y5F0 798 aa18.8■□□□□ 0.6
VARS2-204ENST00000467717 RANBP2P49792 3224 aaKnown RBP18.8■□□□□ 0.6
VARS2-204ENST00000467717 ARID2Q68CP9 1835 aa18.79■□□□□ 0.6
VARS2-204ENST00000467717 ACKR2O00590 384 aa18.79■□□□□ 0.6
VARS2-204ENST00000467717 GCNT3O95395 438 aa18.79■□□□□ 0.6
VARS2-204ENST00000467717 PFKMP08237 780 aa18.79■□□□□ 0.6
VARS2-204ENST00000467717 GTF2BQ00403 316 aa18.79■□□□□ 0.6
VARS2-204ENST00000467717 FPGSQ05932 587 aa18.79■□□□□ 0.6
VARS2-204ENST00000467717 NFX1Q12986 1120 aaKnown RBP18.79■□□□□ 0.6
VARS2-204ENST00000467717 STRN3Q13033 797 aa18.79■□□□□ 0.6
VARS2-204ENST00000467717 PPIGQ13427 754 aaKnown RBP eCLIP18.79■□□□□ 0.64e-8■■■□□ 15
VARS2-204ENST00000467717 FAM187BQ17R55 369 aa18.79■□□□□ 0.6
VARS2-204ENST00000467717 PLEKHG4Q58EX7 1191 aa18.79■□□□□ 0.6
VARS2-204ENST00000467717 CCDC183Q5T5S1 534 aa18.79■□□□□ 0.6
VARS2-204ENST00000467717 PPP4R3CPQ6ZMV5 832 aa18.79■□□□□ 0.6
VARS2-204ENST00000467717 FAM43BQ6ZT52 329 aaPredicted RBP18.79■□□□□ 0.6
VARS2-204ENST00000467717 STXBP4Q6ZWJ1 553 aa18.79■□□□□ 0.6
VARS2-204ENST00000467717 DEFB128Q7Z7B8 93 aa18.79■□□□□ 0.6
VARS2-204ENST00000467717 RPUSD2Q8IZ73 545 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms