RNA–Protein interactions for RNA: ENST00000467343.1

CRAT-209, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 5

Gene CRAT, Length 399 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-209ENST00000467343 ORC2Q13416 577 aaPredicted RBP13.74□□□□□ -0.21
CRAT-209ENST00000467343 NBR1Q14596 966 aa13.74□□□□□ -0.21
CRAT-209ENST00000467343 CSPP1Q1MSJ5 1256 aa13.74□□□□□ -0.21
CRAT-209ENST00000467343 HAUS3Q68CZ6 603 aa13.74□□□□□ -0.21
CRAT-209ENST00000467343 SRGAP1Q7Z6B7 1085 aa13.74□□□□□ -0.21
CRAT-209ENST00000467343 COLGALT1Q8NBJ5 622 aa13.74□□□□□ -0.21
CRAT-209ENST00000467343 TMEM87AQ8NBN3 555 aa13.74□□□□□ -0.21
CRAT-209ENST00000467343 ZNF558Q96NG5 402 aa13.74□□□□□ -0.21
CRAT-209ENST00000467343 CEP89Q96ST8 783 aa13.74□□□□□ -0.21
CRAT-209ENST00000467343 MRPL9Q9BYD2 267 aaKnown RBP13.74□□□□□ -0.21
CRAT-209ENST00000467343 RAB34Q9BZG1 259 aa13.74□□□□□ -0.21
CRAT-209ENST00000467343 DHX33Q9H6R0 707 aaKnown RBP13.74□□□□□ -0.21
CRAT-209ENST00000467343 ENTPD7Q9NQZ7 604 aa13.74□□□□□ -0.21
CRAT-209ENST00000467343 CHST12Q9NRB3 414 aa13.74□□□□□ -0.21
CRAT-209ENST00000467343 ANKEF1Q9NU02 776 aa13.74□□□□□ -0.21
CRAT-209ENST00000467343 HCSTQ9UBK5 93 aa13.74□□□□□ -0.21
CRAT-209ENST00000467343 PUF60Q9UHX1 559 aaKnown RBP13.74□□□□□ -0.21
CRAT-209ENST00000467343 MUC3AQ02505 3323 aa13.73□□□□□ -0.21
CRAT-209ENST00000467343 A0A0U1RQF3 1178 aa13.73□□□□□ -0.21
CRAT-209ENST00000467343 ARHGEF35A5YM69 484 aa13.73□□□□□ -0.21
CRAT-209ENST00000467343 NCK2O43639 380 aa13.73□□□□□ -0.21
CRAT-209ENST00000467343 DGAT1O75907 488 aa13.73□□□□□ -0.21
CRAT-209ENST00000467343 FGF18O76093 207 aa13.73□□□□□ -0.21
CRAT-209ENST00000467343 EOMESO95936 686 aa13.73□□□□□ -0.21
CRAT-209ENST00000467343 MCM4P33991 863 aa13.73□□□□□ -0.21
CRAT-209ENST00000467343 CCT6AP40227 531 aaKnown RBP13.73□□□□□ -0.21
CRAT-209ENST00000467343 TRAPPC10P48553 1259 aa13.73□□□□□ -0.21
CRAT-209ENST00000467343 NDUFV1P49821 464 aa13.73□□□□□ -0.21
CRAT-209ENST00000467343 RAB27AP51159 221 aa13.73□□□□□ -0.21
CRAT-209ENST00000467343 FAM189BP81408 668 aa13.73□□□□□ -0.21
CRAT-209ENST00000467343 KRT17Q04695 432 aa13.73□□□□□ -0.21
CRAT-209ENST00000467343 DNM1Q05193 864 aaKnown RBP13.73□□□□□ -0.21
CRAT-209ENST00000467343 MXD4Q14582 209 aaPredicted RBP13.73□□□□□ -0.21
CRAT-209ENST00000467343 CLUL1Q15846 466 aa13.73□□□□□ -0.21
CRAT-209ENST00000467343 PTCRAQ6ISU1 281 aaPredicted RBP13.73□□□□□ -0.21
CRAT-209ENST00000467343 GLB1LQ6UWU2 654 aa13.73□□□□□ -0.21
CRAT-209ENST00000467343 CLEC17AQ6ZS10 378 aa13.73□□□□□ -0.21
CRAT-209ENST00000467343 RBM23Q86U06 439 aaKnown RBP13.73□□□□□ -0.21
CRAT-209ENST00000467343 URGCPQ8TCY9 931 aa13.73□□□□□ -0.21
CRAT-209ENST00000467343 LPPQ93052 612 aa13.73□□□□□ -0.21
CRAT-209ENST00000467343 PGBD4Q96DM1 585 aa13.73□□□□□ -0.21
CRAT-209ENST00000467343 FAM193BQ96PV7 902 aaPredicted RBP13.73□□□□□ -0.21
CRAT-209ENST00000467343 MTMR9Q96QG7 549 aa13.73□□□□□ -0.21
CRAT-209ENST00000467343 TRIM6Q9C030 488 aaPredicted RBP13.73□□□□□ -0.21
CRAT-209ENST00000467343 GBP3Q9H0R5 595 aa13.73□□□□□ -0.21
CRAT-209ENST00000467343 POLR3FQ9H1D9 316 aaPredicted RBP13.73□□□□□ -0.21
CRAT-209ENST00000467343 GDPD2Q9HCC8 539 aa13.73□□□□□ -0.21
CRAT-209ENST00000467343 TUFT1Q9NNX1 390 aa13.73□□□□□ -0.21
CRAT-209ENST00000467343 FAM105AQ9NUU6 356 aa13.73□□□□□ -0.21
CRAT-209ENST00000467343 FAM50BQ9Y247 325 aa13.73□□□□□ -0.21
CRAT-209ENST00000467343 LRRIQ4A6NIV6 560 aa13.72□□□□□ -0.21
CRAT-209ENST00000467343 ZC3H11AO75152 810 aaKnown RBP eCLIP13.72□□□□□ -0.21
CRAT-209ENST00000467343 LINC00271P0C7V0 271 aa13.72□□□□□ -0.21
CRAT-209ENST00000467343 BMP1P13497 986 aa13.72□□□□□ -0.21
CRAT-209ENST00000467343 LIG1P18858 919 aa13.72□□□□□ -0.21
CRAT-209ENST00000467343 NCLP19338 710 aaKnown RBP13.72□□□□□ -0.21
CRAT-209ENST00000467343 SSTR3P32745 418 aaPredicted RBP13.72□□□□□ -0.21
CRAT-209ENST00000467343 PPM1AP35813 382 aa13.72□□□□□ -0.21
CRAT-209ENST00000467343 PBX3P40426 434 aa13.72□□□□□ -0.21
CRAT-209ENST00000467343 RARRES1P49788 294 aa13.72□□□□□ -0.21
CRAT-209ENST00000467343 BMS1Q14692 1282 aaKnown RBP13.72□□□□□ -0.21
CRAT-209ENST00000467343 ZRSR1Q15695 479 aaKnown RBP13.72□□□□□ -0.21
CRAT-209ENST00000467343 PLPP4Q5VZY2 271 aa13.72□□□□□ -0.21
CRAT-209ENST00000467343 POTEGQ6S5H5 508 aa13.72□□□□□ -0.21
CRAT-209ENST00000467343 CRIPAKQ8N1N5 446 aa13.72□□□□□ -0.21
CRAT-209ENST00000467343 SPPL3Q8TCT6 385 aa13.72□□□□□ -0.21
CRAT-209ENST00000467343 PABPC5Q96DU9 382 aaKnown RBP13.72□□□□□ -0.21
CRAT-209ENST00000467343 CASD1Q96PB1 797 aa13.72□□□□□ -0.21
CRAT-209ENST00000467343 NACC1Q96RE7 527 aa13.72□□□□□ -0.21
CRAT-209ENST00000467343 TLR9Q9NR96 1032 aa13.72□□□□□ -0.21
CRAT-209ENST00000467343 AGPAT5Q9NUQ2 364 aa13.72□□□□□ -0.21
CRAT-209ENST00000467343 LRWD1Q9UFC0 647 aa13.72□□□□□ -0.21
CRAT-209ENST00000467343 TTC28Q96AY4 2481 aa13.72□□□□□ -0.21
CRAT-209ENST00000467343 MED24O75448 989 aa13.71□□□□□ -0.21
CRAT-209ENST00000467343 PDIA4P13667 645 aaKnown RBP13.71□□□□□ -0.21
CRAT-209ENST00000467343 NRIP1P48552 1158 aa13.71□□□□□ -0.21
CRAT-209ENST00000467343 ALDH7A1P49419 539 aaKnown RBP13.71□□□□□ -0.21
CRAT-209ENST00000467343 HYAL1Q12794 435 aa13.71□□□□□ -0.21
CRAT-209ENST00000467343 PUS10Q3MIT2 529 aaKnown RBP13.71□□□□□ -0.21
CRAT-209ENST00000467343 LEXMQ3ZCV2 418 aa13.71□□□□□ -0.21
CRAT-209ENST00000467343 KCNT2Q6UVM3 1135 aa13.71□□□□□ -0.21
CRAT-209ENST00000467343 ZBTB8OSQ8IWT0 167 aa13.71□□□□□ -0.21
CRAT-209ENST00000467343 SNX29Q8TEQ0 813 aa13.71□□□□□ -0.21
CRAT-209ENST00000467343 CPB2Q96IY4 423 aa13.71□□□□□ -0.21
CRAT-209ENST00000467343 HSD17B14Q9BPX1 270 aa13.71□□□□□ -0.21
CRAT-209ENST00000467343 APOL6Q9BWW8 343 aa13.71□□□□□ -0.21
CRAT-209ENST00000467343 CWH43Q9H720 699 aa13.71□□□□□ -0.21
CRAT-209ENST00000467343 TLE6Q9H808 572 aa13.71□□□□□ -0.21
CRAT-209ENST00000467343 IFT122Q9HBG6 1241 aa13.71□□□□□ -0.21
CRAT-209ENST00000467343 SPG21Q9NZD8 308 aa13.71□□□□□ -0.21
CRAT-209ENST00000467343 RAPGEFL1Q9UHV5 662 aa13.71□□□□□ -0.21
CRAT-209ENST00000467343 TRANK1O15050 2925 aa13.71□□□□□ -0.21
CRAT-209ENST00000467343 PLXNA4Q9HCM2 1894 aa13.71□□□□□ -0.21
CRAT-209ENST00000467343 LYPLA2O95372 231 aa13.7□□□□□ -0.22
CRAT-209ENST00000467343 SRGAP2BP0DMP2 458 aa13.7□□□□□ -0.22
CRAT-209ENST00000467343 ITGA4P13612 1032 aa13.7□□□□□ -0.22
CRAT-209ENST00000467343 DNAJB1P25685 340 aa13.7□□□□□ -0.22
CRAT-209ENST00000467343 GTF2F1P35269 517 aaKnown RBP eCLIP13.7□□□□□ -0.22
CRAT-209ENST00000467343 IRS1P35568 1242 aa13.7□□□□□ -0.22
CRAT-209ENST00000467343 UBE3AQ05086 875 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms