RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 FKBP15Q5T1M5 1219 aa6.42□□□□□ -1.38
PRPF40A-205ENST00000467114 PRAMEF9Q5VWM5 478 aa6.42□□□□□ -1.38
PRPF40A-205ENST00000467114 CDCA2Q69YH5 1023 aaPredicted RBP6.42□□□□□ -1.38
PRPF40A-205ENST00000467114 MFSD5Q6N075 450 aa6.42□□□□□ -1.38
PRPF40A-205ENST00000467114 KANSL1Q7Z3B3 1105 aa6.42□□□□□ -1.38
PRPF40A-205ENST00000467114 RPGRQ92834 1020 aaKnown RBP6.42□□□□□ -1.38
PRPF40A-205ENST00000467114 AGAP2Q99490 1192 aa6.42□□□□□ -1.38
PRPF40A-205ENST00000467114 GPR87Q9BY21 358 aa6.42□□□□□ -1.38
PRPF40A-205ENST00000467114 KLRG2A4D1S0 409 aaPredicted RBP6.41□□□□□ -1.38
PRPF40A-205ENST00000467114 ADCY1Q08828 1119 aa6.41□□□□□ -1.38
PRPF40A-205ENST00000467114 PCBP1Q15365 356 aaKnown RBP eCLIP6.41□□□□□ -1.38
PRPF40A-205ENST00000467114 SEPT7Q16181 437 aaKnown RBP6.41□□□□□ -1.38
PRPF40A-205ENST00000467114 KIF18BQ86Y91 864 aa6.41□□□□□ -1.38
PRPF40A-205ENST00000467114 DNAI1Q9UI46 699 aa6.41□□□□□ -1.38
PRPF40A-205ENST00000467114 RCAN3Q9UKA8 241 aa6.41□□□□□ -1.38
PRPF40A-205ENST00000467114 DMRT1Q9Y5R6 373 aa6.41□□□□□ -1.38
PRPF40A-205ENST00000467114 A0A0A6YYJ9 748 aa6.4□□□□□ -1.38
PRPF40A-205ENST00000467114 DAPK3O43293 454 aa6.4□□□□□ -1.38
PRPF40A-205ENST00000467114 JMJD7P0C870 316 aa6.4□□□□□ -1.38
PRPF40A-205ENST00000467114 PIK3R6Q5UE93 754 aa6.4□□□□□ -1.38
PRPF40A-205ENST00000467114 C1QL3Q5VWW1 255 aa6.4□□□□□ -1.38
PRPF40A-205ENST00000467114 ESRP1Q6NXG1 681 aaKnown RBP6.4□□□□□ -1.38
PRPF40A-205ENST00000467114 ZNF575Q86XF7 245 aa6.4□□□□□ -1.38
PRPF40A-205ENST00000467114 ZNF512Q96ME7 567 aaPredicted RBP6.4□□□□□ -1.38
PRPF40A-205ENST00000467114 ELF4Q99607 663 aaPredicted RBP6.4□□□□□ -1.38
PRPF40A-205ENST00000467114 OSBPL6Q9BZF3 934 aa6.4□□□□□ -1.38
PRPF40A-205ENST00000467114 C14orf93Q9H972 538 aaKnown RBP6.4□□□□□ -1.38
PRPF40A-205ENST00000467114 FOXN1O15353 648 aa6.39□□□□□ -1.39
PRPF40A-205ENST00000467114 MTSS1O43312 755 aa6.39□□□□□ -1.39
PRPF40A-205ENST00000467114 RAMP2O60895 175 aa6.39□□□□□ -1.39
PRPF40A-205ENST00000467114 MFAP3LO75121 409 aa6.39□□□□□ -1.39
PRPF40A-205ENST00000467114 HNRNPLP14866 589 aaKnown RBP eCLIP6.39□□□□□ -1.39
PRPF40A-205ENST00000467114 SLC9A1P19634 815 aa6.39□□□□□ -1.39
PRPF40A-205ENST00000467114 PTGS2P35354 604 aa6.39□□□□□ -1.39
PRPF40A-205ENST00000467114 KIR2DL3P43628 341 aa6.39□□□□□ -1.39
PRPF40A-205ENST00000467114 NANOS3P60323 173 aaKnown RBP6.39□□□□□ -1.39
PRPF40A-205ENST00000467114 DSG1Q02413 1049 aa6.39□□□□□ -1.39
PRPF40A-205ENST00000467114 ADCY2Q08462 1091 aa6.39□□□□□ -1.39
PRPF40A-205ENST00000467114 RABL3Q5HYI8 236 aa6.39□□□□□ -1.39
PRPF40A-205ENST00000467114 NAIF1Q69YI7 327 aaPredicted RBP6.39□□□□□ -1.39
PRPF40A-205ENST00000467114 KRT40Q6A162 431 aa6.39□□□□□ -1.39
PRPF40A-205ENST00000467114 PHYKPLQ8IUZ5 450 aa6.39□□□□□ -1.39
PRPF40A-205ENST00000467114 CMTM4Q8IZR5 234 aa6.39□□□□□ -1.39
PRPF40A-205ENST00000467114 MDGA1Q8NFP4 955 aa6.39□□□□□ -1.39
PRPF40A-205ENST00000467114 MNTQ99583 582 aa6.39□□□□□ -1.39
PRPF40A-205ENST00000467114 TRPS1Q9UHF7 1281 aa6.39□□□□□ -1.39
PRPF40A-205ENST00000467114 SYNPO2Q9UMS6 1093 aa6.39□□□□□ -1.39
PRPF40A-205ENST00000467114 MAPRE3Q9UPY8 281 aa6.39□□□□□ -1.39
PRPF40A-205ENST00000467114 SPO11Q9Y5K1 396 aa6.39□□□□□ -1.39
PRPF40A-205ENST00000467114 GOLGA6L6A8MZA4 724 aa6.38□□□□□ -1.39
PRPF40A-205ENST00000467114 MAFGO15525 162 aa6.38□□□□□ -1.39
PRPF40A-205ENST00000467114 IPO13O94829 963 aaKnown RBP6.38□□□□□ -1.39
PRPF40A-205ENST00000467114 FLT3P36888 993 aa6.38□□□□□ -1.39
PRPF40A-205ENST00000467114 SPIDRQ14159 915 aa6.38□□□□□ -1.39
PRPF40A-205ENST00000467114 TIGD7Q6NT04 549 aaPredicted RBP6.38□□□□□ -1.39
PRPF40A-205ENST00000467114 UBE2R2Q712K3 238 aaPredicted RBP6.38□□□□□ -1.39
PRPF40A-205ENST00000467114 KRT26Q7Z3Y9 468 aa6.38□□□□□ -1.39
PRPF40A-205ENST00000467114 MRGPREQ86SM8 312 aa6.38□□□□□ -1.39
PRPF40A-205ENST00000467114 ELOA2Q8IYF1 753 aaPredicted RBP6.38□□□□□ -1.39
PRPF40A-205ENST00000467114 RPUSD2Q8IZ73 545 aaKnown RBP6.38□□□□□ -1.39
PRPF40A-205ENST00000467114 SLC25A43Q8WUT9 341 aaPredicted RBP6.38□□□□□ -1.39
PRPF40A-205ENST00000467114 HAS1Q92839 578 aa6.38□□□□□ -1.39
PRPF40A-205ENST00000467114 TTPALQ9BTX7 342 aa6.38□□□□□ -1.39
PRPF40A-205ENST00000467114 NRDE2Q9H7Z3 1164 aa6.38□□□□□ -1.39
PRPF40A-205ENST00000467114 PRKAB1Q9Y478 270 aa6.38□□□□□ -1.39
PRPF40A-205ENST00000467114 A0A0A6YYK5 440 aaPredicted RBP6.37□□□□□ -1.39
PRPF40A-205ENST00000467114 TMEM191CA6NGB0 347 aa6.37□□□□□ -1.39
PRPF40A-205ENST00000467114 GRXCR1A8MXD5 290 aa6.37□□□□□ -1.39
PRPF40A-205ENST00000467114 PDE8AO60658 829 aa6.37□□□□□ -1.39
PRPF40A-205ENST00000467114 OPHN1O60890 802 aa6.37□□□□□ -1.39
PRPF40A-205ENST00000467114 RPS6KA4O75676 772 aa6.37□□□□□ -1.39
PRPF40A-205ENST00000467114 PRPF6O94906 941 aaKnown RBP6.37□□□□□ -1.39
PRPF40A-205ENST00000467114 F2P00734 622 aa6.37□□□□□ -1.39
PRPF40A-205ENST00000467114 MYCLP1P12525 358 aaPredicted RBP6.37□□□□□ -1.39
PRPF40A-205ENST00000467114 COL10A1Q03692 680 aa6.37□□□□□ -1.39
PRPF40A-205ENST00000467114 MAN2A1Q16706 1144 aa6.37□□□□□ -1.39
PRPF40A-205ENST00000467114 KIAA1841Q6NSI8 718 aa6.37□□□□□ -1.39
PRPF40A-205ENST00000467114 RHOUQ7L0Q8 258 aa6.37□□□□□ -1.39
PRPF40A-205ENST00000467114 FAM177A1Q8N128 213 aaPredicted RBP6.37□□□□□ -1.39
PRPF40A-205ENST00000467114 PPM1KQ8N3J5 372 aa6.37□□□□□ -1.39
PRPF40A-205ENST00000467114 C7orf31Q8N865 590 aa6.37□□□□□ -1.39
PRPF40A-205ENST00000467114 ATXN2LQ8WWM7 1075 aaKnown RBP6.37□□□□□ -1.39
PRPF40A-205ENST00000467114 LENG9Q96B70 501 aa6.37□□□□□ -1.39
PRPF40A-205ENST00000467114 SOX7Q9BT81 388 aa6.37□□□□□ -1.39
PRPF40A-205ENST00000467114 MTG2Q9H4K7 406 aa6.37□□□□□ -1.39
PRPF40A-205ENST00000467114 FAM20BO75063 409 aa6.36□□□□□ -1.39
PRPF40A-205ENST00000467114 NPEPPSP55786 919 aa6.36□□□□□ -1.39
PRPF40A-205ENST00000467114 CFAP100Q494V2 611 aa6.36□□□□□ -1.39
PRPF40A-205ENST00000467114 UNQ6494/PRO21346Q6UXR6 183 aa6.36□□□□□ -1.39
PRPF40A-205ENST00000467114 DNAJC10Q8IXB1 793 aa6.36□□□□□ -1.39
PRPF40A-205ENST00000467114 ZZZ3Q8IYH5 903 aa6.36□□□□□ -1.39
PRPF40A-205ENST00000467114 AFAP1L2Q8N4X5 818 aa6.36□□□□□ -1.39
PRPF40A-205ENST00000467114 PPP1R14CQ8TAE6 165 aa6.36□□□□□ -1.39
PRPF40A-205ENST00000467114 ST8SIA2Q92186 375 aa6.36□□□□□ -1.39
PRPF40A-205ENST00000467114 ARL8AQ96BM9 186 aa6.36□□□□□ -1.39
PRPF40A-205ENST00000467114 ZG16BQ96DA0 208 aa6.36□□□□□ -1.39
PRPF40A-205ENST00000467114 MYL10Q9BUA6 226 aa6.36□□□□□ -1.39
PRPF40A-205ENST00000467114 FAM126AQ9BYI3 521 aaPredicted RBP6.36□□□□□ -1.39
PRPF40A-205ENST00000467114 KRTAP9-8Q9BYQ0 159 aa6.36□□□□□ -1.39
PRPF40A-205ENST00000467114 TMX1Q9H3N1 280 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms