RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 SLFN12LQ6IEE8 588 aa6.07□□□□□ -1.44
XRN1-206ENST00000467077 SIMC1Q8NDZ2 872 aa6.07□□□□□ -1.44
XRN1-206ENST00000467077 SCARB1Q8WTV0 552 aa6.07□□□□□ -1.44
XRN1-206ENST00000467077 ZNF669Q96BR6 464 aaPredicted RBP6.07□□□□□ -1.44
XRN1-206ENST00000467077 FOXRED1Q96CU9 486 aaPredicted RBP6.07□□□□□ -1.44
XRN1-206ENST00000467077 CELF4Q9BZC1 486 aaKnown RBP6.07□□□□□ -1.44
XRN1-206ENST00000467077 SYBUQ9NX95 663 aa6.07□□□□□ -1.44
XRN1-206ENST00000467077 COQ6Q9Y2Z9 468 aa6.07□□□□□ -1.44
XRN1-206ENST00000467077 GAGE12BA1L429 117 aa6.06□□□□□ -1.44
XRN1-206ENST00000467077 GAGE12HA6NDE8 117 aa6.06□□□□□ -1.44
XRN1-206ENST00000467077 AHRRA9YTQ3 701 aa6.06□□□□□ -1.44
XRN1-206ENST00000467077 ZNF185O15231 689 aa6.06□□□□□ -1.44
XRN1-206ENST00000467077 PTH2RP49190 550 aa6.06□□□□□ -1.44
XRN1-206ENST00000467077 BLOC1S1P78537 153 aa6.06□□□□□ -1.44
XRN1-206ENST00000467077 FAM214AQ32MH5 1076 aa6.06□□□□□ -1.44
XRN1-206ENST00000467077 METTL24Q5JXM2 366 aa6.06□□□□□ -1.44
XRN1-206ENST00000467077 GDF7Q7Z4P5 450 aa6.06□□□□□ -1.44
XRN1-206ENST00000467077 BMP8AQ7Z5Y6 402 aa6.06□□□□□ -1.44
XRN1-206ENST00000467077 RPGRQ92834 1020 aaKnown RBP6.06□□□□□ -1.44
XRN1-206ENST00000467077 DCLRE1CQ96SD1 692 aaKnown RBP6.06□□□□□ -1.44
XRN1-206ENST00000467077 LRFN3Q9BTN0 628 aa6.06□□□□□ -1.44
XRN1-206ENST00000467077 NDC1Q9BTX1 674 aa6.06□□□□□ -1.44
XRN1-206ENST00000467077 AKIP1Q9NQ31 210 aa6.06□□□□□ -1.44
XRN1-206ENST00000467077 SYNPO2Q9UMS6 1093 aa6.06□□□□□ -1.44
XRN1-206ENST00000467077 EPN1Q9Y6I3 576 aaPredicted RBP6.06□□□□□ -1.44
XRN1-206ENST00000467077 COL11A2P13942 1736 aaPredicted RBP6.05□□□□□ -1.44
XRN1-206ENST00000467077 NCR1O76036 304 aa6.05□□□□□ -1.44
XRN1-206ENST00000467077 APOBEC3AP31941 199 aaPredicted RBP6.05□□□□□ -1.44
XRN1-206ENST00000467077 FNTBP49356 437 aa6.05□□□□□ -1.44
XRN1-206ENST00000467077 FAM189BP81408 668 aa6.05□□□□□ -1.44
XRN1-206ENST00000467077 VPS72Q15906 364 aa6.05□□□□□ -1.44
XRN1-206ENST00000467077 FAM83AQ86UY5 434 aa6.05□□□□□ -1.44
XRN1-206ENST00000467077 CAGE1Q8TC20 777 aa6.05□□□□□ -1.44
XRN1-206ENST00000467077 LINC00476Q8WZB0 136 aa6.05□□□□□ -1.44
XRN1-206ENST00000467077 SLC9A6Q92581 669 aa6.05□□□□□ -1.44
XRN1-206ENST00000467077 MAML3Q96JK9 1138 aa6.05□□□□□ -1.44
XRN1-206ENST00000467077 PDCD2LQ9BRP1 358 aa6.05□□□□□ -1.44
XRN1-206ENST00000467077 SLC29A3Q9BZD2 475 aa6.05□□□□□ -1.44
XRN1-206ENST00000467077 TLK1Q9UKI8 766 aa6.05□□□□□ -1.44
XRN1-206ENST00000467077 HDAC5Q9UQL6 1122 aa6.05□□□□□ -1.44
XRN1-206ENST00000467077 UBA6A0AVT1 1052 aaPredicted RBP6.04□□□□□ -1.44
XRN1-206ENST00000467077 NDUFA10O95299 355 aa6.04□□□□□ -1.44
XRN1-206ENST00000467077 RGS19P49795 217 aa6.04□□□□□ -1.44
XRN1-206ENST00000467077 GUCY1B3Q02153 619 aa6.04□□□□□ -1.44
XRN1-206ENST00000467077 ARID5AQ03989 594 aa6.04□□□□□ -1.44
XRN1-206ENST00000467077 MAPK7Q13164 816 aa6.04□□□□□ -1.44
XRN1-206ENST00000467077 PRAMEF9Q5VWM5 478 aa6.04□□□□□ -1.44
XRN1-206ENST00000467077 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.04□□□□□ -1.44
XRN1-206ENST00000467077 CC2D1AQ6P1N0 951 aaPredicted RBP6.04□□□□□ -1.44
XRN1-206ENST00000467077 PLXDC1Q8IUK5 500 aa6.04□□□□□ -1.44
XRN1-206ENST00000467077 UIMC1Q96RL1 719 aa6.04□□□□□ -1.44
XRN1-206ENST00000467077 HNRNPLP14866 589 aaKnown RBP eCLIP6.03□□□□□ -1.44
XRN1-206ENST00000467077 KRTAP10-7P60409 375 aaPredicted RBP6.03□□□□□ -1.44
XRN1-206ENST00000467077 DDB1Q16531 1140 aa6.03□□□□□ -1.44
XRN1-206ENST00000467077 FAM209AQ5JX71 171 aa6.03□□□□□ -1.44
XRN1-206ENST00000467077 LILRA3Q8N6C8 439 aaPredicted RBP6.03□□□□□ -1.44
XRN1-206ENST00000467077 C2orf69Q8N8R5 385 aa6.03□□□□□ -1.44
XRN1-206ENST00000467077 OR52N2Q8NGI0 321 aa6.03□□□□□ -1.44
XRN1-206ENST00000467077 BRIP1Q9BX63 1249 aa6.03□□□□□ -1.44
XRN1-206ENST00000467077 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.03□□□□□ -1.44
XRN1-206ENST00000467077 ARHGEF17Q96PE2 2063 aaPredicted RBP6.03□□□□□ -1.44
XRN1-206ENST00000467077 MAFGO15525 162 aa6.02□□□□□ -1.45
XRN1-206ENST00000467077 HOXA3O43365 443 aaPredicted RBP6.02□□□□□ -1.45
XRN1-206ENST00000467077 DNAJC6O75061 913 aa6.02□□□□□ -1.45
XRN1-206ENST00000467077 ERCC5P28715 1186 aaPredicted RBP6.02□□□□□ -1.45
XRN1-206ENST00000467077 MFAP1P55081 439 aaKnown RBP6.02□□□□□ -1.45
XRN1-206ENST00000467077 FOXI1Q12951 378 aa6.02□□□□□ -1.45
XRN1-206ENST00000467077 TTC38Q5R3I4 469 aa6.02□□□□□ -1.45
XRN1-206ENST00000467077 SRRM1Q8IYB3 904 aaKnown RBP6.02□□□□□ -1.45
XRN1-206ENST00000467077 FAM98AQ8NCA5 519 aaKnown RBP6.02□□□□□ -1.45
XRN1-206ENST00000467077 DUSP26Q9BV47 211 aa6.02□□□□□ -1.45
XRN1-206ENST00000467077 HLA-DOAP06340 250 aa6.01□□□□□ -1.45
XRN1-206ENST00000467077 BMPR1AP36894 532 aa6.01□□□□□ -1.45
XRN1-206ENST00000467077 PLA2G5P39877 138 aa6.01□□□□□ -1.45
XRN1-206ENST00000467077 BCAR1P56945 870 aa6.01□□□□□ -1.45
XRN1-206ENST00000467077 FOXF2Q12947 444 aa6.01□□□□□ -1.45
XRN1-206ENST00000467077 MPP3Q13368 585 aa6.01□□□□□ -1.45
XRN1-206ENST00000467077 MAN2A1Q16706 1144 aa6.01□□□□□ -1.45
XRN1-206ENST00000467077 BEAN1Q3B7T3 259 aa6.01□□□□□ -1.45
XRN1-206ENST00000467077 ABHD17BQ5VST6 288 aa6.01□□□□□ -1.45
XRN1-206ENST00000467077 OVCH1Q7RTY7 1134 aa6.01□□□□□ -1.45
XRN1-206ENST00000467077 MCF2L2Q86YR7 1114 aa6.01□□□□□ -1.45
XRN1-206ENST00000467077 BOCQ9BWV1 1114 aa6.01□□□□□ -1.45
XRN1-206ENST00000467077 CPEB1Q9BZB8 566 aaKnown RBP6.01□□□□□ -1.45
XRN1-206ENST00000467077 KIAA1586Q9HCI6 787 aa6.01□□□□□ -1.45
XRN1-206ENST00000467077 ACSS2Q9NR19 701 aa6.01□□□□□ -1.45
XRN1-206ENST00000467077 NDOR1Q9UHB4 597 aa6.01□□□□□ -1.45
XRN1-206ENST00000467077 PIPSLA2A3N6 862 aa6□□□□□ -1.45
XRN1-206ENST00000467077 KLF4O43474 513 aa6□□□□□ -1.45
XRN1-206ENST00000467077 ADCY3O60266 1144 aa6□□□□□ -1.45
XRN1-206ENST00000467077 EFCAB14O75071 495 aa6□□□□□ -1.45
XRN1-206ENST00000467077 KRT37O76014 449 aa6□□□□□ -1.45
XRN1-206ENST00000467077 ABCG1P45844 678 aa6□□□□□ -1.45
XRN1-206ENST00000467077 MXRA7P84157 204 aa6□□□□□ -1.45
XRN1-206ENST00000467077 ZNF366Q8N895 744 aa6□□□□□ -1.45
XRN1-206ENST00000467077 CPEB3Q8NE35 698 aaKnown RBP6□□□□□ -1.45
XRN1-206ENST00000467077 TUBGCP5Q96RT8 1024 aa6□□□□□ -1.45
XRN1-206ENST00000467077 TRIM55Q9BYV6 548 aa6□□□□□ -1.45
XRN1-206ENST00000467077 HAPLN2Q9GZV7 340 aa6□□□□□ -1.45
XRN1-206ENST00000467077 CLCA2Q9UQC9 943 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms