RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 TSGA10Q9BZW7 698 aa19.92■□□□□ 0.78
COL9A3-205ENST00000466192 HDAC6Q9UBN7 1215 aa19.92■□□□□ 0.78
COL9A3-205ENST00000466192 AJAP1Q9UKB5 411 aaPredicted RBP19.92■□□□□ 0.78
COL9A3-205ENST00000466192 MYO6Q9UM54 1294 aa19.92■□□□□ 0.78
COL9A3-205ENST00000466192 SNRPFP62306 86 aaKnown RBP19.91■□□□□ 0.78
COL9A3-205ENST00000466192 AMPD2Q01433 879 aa19.91■□□□□ 0.78
COL9A3-205ENST00000466192 CEP112Q8N8E3 955 aa19.91■□□□□ 0.78
COL9A3-205ENST00000466192 GOLGA1Q92805 767 aa19.91■□□□□ 0.78
COL9A3-205ENST00000466192 EFCC1Q9HA90 598 aa19.91■□□□□ 0.78
COL9A3-205ENST00000466192 PNMA3Q9UL41 463 aa19.91■□□□□ 0.78
COL9A3-205ENST00000466192 ANKRD63C9JTQ0 380 aa19.91■□□□□ 0.78
COL9A3-205ENST00000466192 ATP1A1P05023 1023 aaKnown RBP19.91■□□□□ 0.78
COL9A3-205ENST00000466192 MAGEA1P43355 309 aa19.91■□□□□ 0.78
COL9A3-205ENST00000466192 RTP1P59025 263 aa19.91■□□□□ 0.78
COL9A3-205ENST00000466192 DMTNQ08495 405 aa19.91■□□□□ 0.78
COL9A3-205ENST00000466192 EMC2Q15006 297 aa19.91■□□□□ 0.78
COL9A3-205ENST00000466192 METTL7BQ6UX53 244 aa19.91■□□□□ 0.78
COL9A3-205ENST00000466192 XXYLT1Q8NBI6 393 aa19.91■□□□□ 0.78
COL9A3-205ENST00000466192 SECISBP2LQ93073 1101 aaKnown RBP19.91■□□□□ 0.78
COL9A3-205ENST00000466192 HVCN1Q96D96 273 aa19.91■□□□□ 0.78
COL9A3-205ENST00000466192 MPHOSPH6Q99547 160 aaKnown RBP19.91■□□□□ 0.78
COL9A3-205ENST00000466192 POLR3FQ9H1D9 316 aaPredicted RBP19.91■□□□□ 0.78
COL9A3-205ENST00000466192 DDX41Q9UJV9 622 aaKnown RBP19.91■□□□□ 0.78
COL9A3-205ENST00000466192 FBXL5Q9UKA1 691 aa19.91■□□□□ 0.78
COL9A3-205ENST00000466192 ADSSP30520 456 aa19.9■□□□□ 0.78
COL9A3-205ENST00000466192 DLG4P78352 724 aa19.9■□□□□ 0.78
COL9A3-205ENST00000466192 GJB7Q6PEY0 223 aa19.9■□□□□ 0.78
COL9A3-205ENST00000466192 SHCBP1Q8NEM2 672 aa19.9■□□□□ 0.78
COL9A3-205ENST00000466192 EXOC7Q9UPT5 735 aa19.9■□□□□ 0.78
COL9A3-205ENST00000466192 PDHXO00330 501 aa19.9■□□□□ 0.78
COL9A3-205ENST00000466192 POLGP54098 1239 aaPredicted RBP19.9■□□□□ 0.78
COL9A3-205ENST00000466192 ASIC2Q16515 512 aa19.9■□□□□ 0.78
COL9A3-205ENST00000466192 INTS8Q75QN2 995 aaKnown RBP19.9■□□□□ 0.78
COL9A3-205ENST00000466192 SPAG5Q96R06 1193 aa19.9■□□□□ 0.78
COL9A3-205ENST00000466192 CEP89Q96ST8 783 aa19.9■□□□□ 0.78
COL9A3-205ENST00000466192 NIFKQ9BYG3 293 aaKnown RBP19.9■□□□□ 0.78
COL9A3-205ENST00000466192 DHX33Q9H6R0 707 aaKnown RBP19.9■□□□□ 0.78
COL9A3-205ENST00000466192 BTBD19C9JJ37 291 aa19.89■□□□□ 0.77
COL9A3-205ENST00000466192 CETPP11597 493 aa19.89■□□□□ 0.77
COL9A3-205ENST00000466192 KRT13P13646 458 aa19.89■□□□□ 0.77
COL9A3-205ENST00000466192 CNGA1P29973 690 aa19.89■□□□□ 0.77
COL9A3-205ENST00000466192 TCF7P36402 384 aaPredicted RBP19.89■□□□□ 0.77
COL9A3-205ENST00000466192 CLCN6P51797 869 aa19.89■□□□□ 0.77
COL9A3-205ENST00000466192 KLHL30Q0D2K2 578 aa19.89■□□□□ 0.77
COL9A3-205ENST00000466192 TRAPPC11Q7Z392 1133 aa19.89■□□□□ 0.77
COL9A3-205ENST00000466192 IRF2BP2Q7Z5L9 587 aa19.89■□□□□ 0.77
COL9A3-205ENST00000466192 FBXO16Q8IX29 292 aaPredicted RBP19.89■□□□□ 0.77
COL9A3-205ENST00000466192 MLXIPQ9HAP2 919 aa19.89■□□□□ 0.77
COL9A3-205ENST00000466192 SIP14410 1827 aa19.89■□□□□ 0.77
COL9A3-205ENST00000466192 CCL15-CCL14A0A0B4J2E2 113 aa19.88■□□□□ 0.77
COL9A3-205ENST00000466192 SPDYE4A6NLX3 237 aa19.88■□□□□ 0.77
COL9A3-205ENST00000466192 STAT5BP51692 787 aa19.88■□□□□ 0.77
COL9A3-205ENST00000466192 VAMP7P51809 220 aa19.88■□□□□ 0.77
COL9A3-205ENST00000466192 JAM2P57087 298 aa19.88■□□□□ 0.77
COL9A3-205ENST00000466192 CCL15Q16663 113 aa19.88■□□□□ 0.77
COL9A3-205ENST00000466192 WHAMMP3Q1A5X7 153 aa19.88■□□□□ 0.77
COL9A3-205ENST00000466192 IQCEQ6IPM2 695 aa19.88■□□□□ 0.77
COL9A3-205ENST00000466192 SLC39A4Q6P5W5 647 aa19.88■□□□□ 0.77
COL9A3-205ENST00000466192 GPR161Q8N6U8 529 aaKnown RBP19.88■□□□□ 0.77
COL9A3-205ENST00000466192 GPRC5AQ8NFJ5 357 aa19.88■□□□□ 0.77
COL9A3-205ENST00000466192 MORC4Q8TE76 937 aa19.88■□□□□ 0.77
COL9A3-205ENST00000466192 BRI3BPQ8WY22 251 aa19.88■□□□□ 0.77
COL9A3-205ENST00000466192 SEPT1Q8WYJ6 367 aa19.88■□□□□ 0.77
COL9A3-205ENST00000466192 RABGGTAQ92696 567 aa19.88■□□□□ 0.77
COL9A3-205ENST00000466192 TMEM143Q96AN5 459 aa19.88■□□□□ 0.77
COL9A3-205ENST00000466192 IFT74Q96LB3 600 aa19.88■□□□□ 0.77
COL9A3-205ENST00000466192 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.88■□□□□ 0.77
COL9A3-205ENST00000466192 GBA2Q9HCG7 927 aaPredicted RBP19.88■□□□□ 0.77
COL9A3-205ENST00000466192 GOLGA8IPA6NC78 632 aa19.88■□□□□ 0.77
COL9A3-205ENST00000466192 GOLGA8JA6NMD2 632 aa19.88■□□□□ 0.77
COL9A3-205ENST00000466192 RBAK-RBAKDNI3L0D1 243 aa19.88■□□□□ 0.77
COL9A3-205ENST00000466192 SRGAP2O75044 1071 aa19.88■□□□□ 0.77
COL9A3-205ENST00000466192 ZSCAN20P17040 1043 aaPredicted RBP19.88■□□□□ 0.77
COL9A3-205ENST00000466192 GTF2A2P52657 109 aa19.88■□□□□ 0.77
COL9A3-205ENST00000466192 MYL7Q01449 175 aa19.88■□□□□ 0.77
COL9A3-205ENST00000466192 C1orf220Q5T0J3 134 aa19.88■□□□□ 0.77
COL9A3-205ENST00000466192 TAS1R3Q7RTX0 852 aa19.88■□□□□ 0.77
COL9A3-205ENST00000466192 ANKRD13CQ8N6S4 541 aa19.88■□□□□ 0.77
COL9A3-205ENST00000466192 PLEKHO2Q8TD55 490 aa19.88■□□□□ 0.77
COL9A3-205ENST00000466192 AFAP1L1Q8TED9 768 aa19.88■□□□□ 0.77
COL9A3-205ENST00000466192 RRAGCQ9HB90 399 aa19.88■□□□□ 0.77
COL9A3-205ENST00000466192 ARHGAP28Q9P2N2 729 aa19.88■□□□□ 0.77
COL9A3-205ENST00000466192 SAR1BQ9Y6B6 198 aa19.88■□□□□ 0.77
COL9A3-205ENST00000466192 CAPN6Q9Y6Q1 641 aa19.88■□□□□ 0.77
COL9A3-205ENST00000466192 MAPK13O15264 365 aa19.87■□□□□ 0.77
COL9A3-205ENST00000466192 MOCS3O95396 460 aa19.87■□□□□ 0.77
COL9A3-205ENST00000466192 ADRB2P07550 413 aa19.87■□□□□ 0.77
COL9A3-205ENST00000466192 PPP3CAQ08209 521 aa19.87■□□□□ 0.77
COL9A3-205ENST00000466192 HSDL1Q3SXM5 330 aa19.87■□□□□ 0.77
COL9A3-205ENST00000466192 KCNV1Q6PIU1 500 aa19.87■□□□□ 0.77
COL9A3-205ENST00000466192 GTF3C2Q8WUA4 911 aaPredicted RBP19.87■□□□□ 0.77
COL9A3-205ENST00000466192 SLC45A1Q9Y2W3 748 aa19.87■□□□□ 0.77
COL9A3-205ENST00000466192 EMSYQ7Z589 1322 aa19.87■□□□□ 0.77
COL9A3-205ENST00000466192 FKBP1BP68106 108 aa19.87■□□□□ 0.77
COL9A3-205ENST00000466192 TARBP2Q15633 366 aaKnown RBP19.87■□□□□ 0.77
COL9A3-205ENST00000466192 CELF3Q5SZQ8 465 aaKnown RBP19.87■□□□□ 0.77
COL9A3-205ENST00000466192 TMEM63BQ5T3F8 832 aa19.87■□□□□ 0.77
COL9A3-205ENST00000466192 FAM160B1Q5W0V3 765 aa19.87■□□□□ 0.77
COL9A3-205ENST00000466192 PAPD7Q5XG87 772 aaKnown RBP19.87■□□□□ 0.77
COL9A3-205ENST00000466192 CCDC62Q6P9F0 684 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms