RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 ADD1P35611 737 aaKnown RBP13.27□□□□□ -0.29
CNOT4-208ENST00000465721 SLC11A1P49279 550 aa13.27□□□□□ -0.29
CNOT4-208ENST00000465721 GIT2Q14161 759 aa13.27□□□□□ -0.29
CNOT4-208ENST00000465721 BMS1Q14692 1282 aaKnown RBP13.27□□□□□ -0.29
CNOT4-208ENST00000465721 RNF20Q5VTR2 975 aa13.27□□□□□ -0.29
CNOT4-208ENST00000465721 CCDC149Q6ZUS6 474 aa13.27□□□□□ -0.29
CNOT4-208ENST00000465721 GPR149Q86SP6 731 aa13.27□□□□□ -0.29
CNOT4-208ENST00000465721 CABP7Q86V35 215 aa13.27□□□□□ -0.29
CNOT4-208ENST00000465721 CCDC105Q8IYK2 499 aa13.27□□□□□ -0.29
CNOT4-208ENST00000465721 RASEFQ8IZ41 740 aa13.27□□□□□ -0.29
CNOT4-208ENST00000465721 FLCNQ8NFG4 579 aa13.27□□□□□ -0.29
CNOT4-208ENST00000465721 GCOM2Q9BZD3 368 aaPredicted RBP13.27□□□□□ -0.29
CNOT4-208ENST00000465721 UNC45AQ9H3U1 944 aa13.27□□□□□ -0.29
CNOT4-208ENST00000465721 C6orf50Q9HD87 102 aa13.27□□□□□ -0.29
CNOT4-208ENST00000465721 NRBP2Q9NSY0 501 aa13.27□□□□□ -0.29
CNOT4-208ENST00000465721 DNAJB4Q9UDY4 337 aa13.27□□□□□ -0.29
CNOT4-208ENST00000465721 DUSP12Q9UNI6 340 aa13.27□□□□□ -0.29
CNOT4-208ENST00000465721 A0A087WZ62 844 aa13.26□□□□□ -0.29
CNOT4-208ENST00000465721 IGKV6-21A0A0C4DH24 114 aa13.26□□□□□ -0.29
CNOT4-208ENST00000465721 CARNS1A5YM72 827 aa13.26□□□□□ -0.29
CNOT4-208ENST00000465721 TMEM150BA6NC51 233 aa13.26□□□□□ -0.29
CNOT4-208ENST00000465721 CHMP2AO43633 222 aa13.26□□□□□ -0.29
CNOT4-208ENST00000465721 PI15O43692 258 aa13.26□□□□□ -0.29
CNOT4-208ENST00000465721 STBD1O95210 358 aa13.26□□□□□ -0.29
CNOT4-208ENST00000465721 SFPQP23246 707 aaKnown RBP eCLIP13.26□□□□□ -0.29
CNOT4-208ENST00000465721 CLCN4P51793 760 aa13.26□□□□□ -0.29
CNOT4-208ENST00000465721 JAK3P52333 1124 aa13.26□□□□□ -0.29
CNOT4-208ENST00000465721 TSGA10IPQ3SY00 556 aa13.26□□□□□ -0.29
CNOT4-208ENST00000465721 LONRF3Q496Y0 759 aa13.26□□□□□ -0.29
CNOT4-208ENST00000465721 NOMO2Q5JPE7 1267 aa13.26□□□□□ -0.29
CNOT4-208ENST00000465721 GLB1LQ6UWU2 654 aa13.26□□□□□ -0.29
CNOT4-208ENST00000465721 ADSSL1Q8N142 457 aa13.26□□□□□ -0.29
CNOT4-208ENST00000465721 CCDC12Q8WUD4 166 aaPredicted RBP13.26□□□□□ -0.29
CNOT4-208ENST00000465721 SLC5A5Q92911 643 aa13.26□□□□□ -0.29
CNOT4-208ENST00000465721 GJA10Q969M2 543 aa13.26□□□□□ -0.29
CNOT4-208ENST00000465721 RIT2Q99578 217 aa13.26□□□□□ -0.29
CNOT4-208ENST00000465721 FDXACB1Q9BRP7 624 aaPredicted RBP13.26□□□□□ -0.29
CNOT4-208ENST00000465721 PIN4Q9Y237 131 aaKnown RBP13.26□□□□□ -0.29
CNOT4-208ENST00000465721 INPP5FQ9Y2H2 1132 aa13.26□□□□□ -0.29
CNOT4-208ENST00000465721 GAS7O60861 476 aa13.25□□□□□ -0.29
CNOT4-208ENST00000465721 OFD1O75665 1012 aa13.25□□□□□ -0.29
CNOT4-208ENST00000465721 GNA11P29992 359 aa13.25□□□□□ -0.29
CNOT4-208ENST00000465721 SFNP31947 248 aa13.25□□□□□ -0.29
CNOT4-208ENST00000465721 TDGQ13569 410 aa13.25□□□□□ -0.29
CNOT4-208ENST00000465721 ANGPT1Q15389 498 aa13.25□□□□□ -0.29
CNOT4-208ENST00000465721 MTERF2Q49AM1 385 aa13.25□□□□□ -0.29
CNOT4-208ENST00000465721 TWF2Q6IBS0 349 aaKnown RBP13.25□□□□□ -0.29
CNOT4-208ENST00000465721 B3GNT9Q6UX72 402 aa13.25□□□□□ -0.29
CNOT4-208ENST00000465721 OTOP3Q7RTS5 596 aa13.25□□□□□ -0.29
CNOT4-208ENST00000465721 ERMP1Q7Z2K6 904 aa13.25□□□□□ -0.29
CNOT4-208ENST00000465721 ZNF410Q86VK4 478 aa13.25□□□□□ -0.29
CNOT4-208ENST00000465721 PPFIBP1Q86W92 1011 aa13.25□□□□□ -0.29
CNOT4-208ENST00000465721 ZNF280BQ86YH2 543 aa13.25□□□□□ -0.29
CNOT4-208ENST00000465721 ACSF2Q96CM8 615 aaPredicted RBP13.25□□□□□ -0.29
CNOT4-208ENST00000465721 YTHDC1Q96MU7 727 aaKnown RBP13.25□□□□□ -0.29
CNOT4-208ENST00000465721 TEKT3Q9BXF9 490 aa13.25□□□□□ -0.29
CNOT4-208ENST00000465721 NIFKQ9BYG3 293 aaKnown RBP13.25□□□□□ -0.29
CNOT4-208ENST00000465721 KCNK12Q9HB15 430 aa13.25□□□□□ -0.29
CNOT4-208ENST00000465721 FAM105AQ9NUU6 356 aa13.25□□□□□ -0.29
CNOT4-208ENST00000465721 SEPT9Q9UHD8 586 aaPredicted RBP13.25□□□□□ -0.29
CNOT4-208ENST00000465721 VWA8A3KMH1 1905 aa13.24□□□□□ -0.29
CNOT4-208ENST00000465721 CCDC196A0A1B0GTZ2 297 aa13.24□□□□□ -0.29
CNOT4-208ENST00000465721 PRPF3O43395 683 aaKnown RBP13.24□□□□□ -0.29
CNOT4-208ENST00000465721 LILRB3O75022 631 aa13.24□□□□□ -0.29
CNOT4-208ENST00000465721 N4BP1O75113 896 aaKnown RBP13.24□□□□□ -0.29
CNOT4-208ENST00000465721 ZNF623O75123 536 aa13.24□□□□□ -0.29
CNOT4-208ENST00000465721 PSMD10O75832 226 aa13.24□□□□□ -0.29
CNOT4-208ENST00000465721 CNPP09543 421 aaKnown RBP13.24□□□□□ -0.29
CNOT4-208ENST00000465721 SKIP12755 728 aa13.24□□□□□ -0.29
CNOT4-208ENST00000465721 ID4P47928 161 aa13.24□□□□□ -0.29
CNOT4-208ENST00000465721 RAB27AP51159 221 aa13.24□□□□□ -0.29
CNOT4-208ENST00000465721 RNASELQ05823 741 aaKnown RBP13.24□□□□□ -0.29
CNOT4-208ENST00000465721 XKR3Q5GH77 459 aa13.24□□□□□ -0.29
CNOT4-208ENST00000465721 LRCH2Q5VUJ6 765 aa13.24□□□□□ -0.29
CNOT4-208ENST00000465721 C15orf39Q6ZRI6 1047 aa13.24□□□□□ -0.29
CNOT4-208ENST00000465721 SIX5Q8N196 739 aa13.24□□□□□ -0.29
CNOT4-208ENST00000465721 DTWD2Q8NBA8 298 aa13.24□□□□□ -0.29
CNOT4-208ENST00000465721 TMEM87AQ8NBN3 555 aa13.24□□□□□ -0.29
CNOT4-208ENST00000465721 RDM1Q8NG50 284 aa13.24□□□□□ -0.29
CNOT4-208ENST00000465721 PHKBQ93100 1093 aa13.24□□□□□ -0.29
CNOT4-208ENST00000465721 CCDC136Q96JN2 1154 aa13.24□□□□□ -0.29
CNOT4-208ENST00000465721 KLHL5Q96PQ7 755 aa13.24□□□□□ -0.29
CNOT4-208ENST00000465721 SH2D3AQ9BRG2 576 aa13.24□□□□□ -0.29
CNOT4-208ENST00000465721 GBP3Q9H0R5 595 aa13.24□□□□□ -0.29
CNOT4-208ENST00000465721 ACACBO00763 2458 aa13.23□□□□□ -0.29
CNOT4-208ENST00000465721 NARSO43776 548 aaKnown RBP13.23□□□□□ -0.29
CNOT4-208ENST00000465721 DDHD2O94830 711 aa13.23□□□□□ -0.29
CNOT4-208ENST00000465721 CPA1P15085 419 aa13.23□□□□□ -0.29
CNOT4-208ENST00000465721 AFF1P51825 1210 aaKnown RBP13.23□□□□□ -0.29
CNOT4-208ENST00000465721 CDC42EP1Q00587 391 aa13.23□□□□□ -0.29
CNOT4-208ENST00000465721 NTRK3Q16288 839 aa13.23□□□□□ -0.29
CNOT4-208ENST00000465721 LETM2Q2VYF4 491 aa13.23□□□□□ -0.29
CNOT4-208ENST00000465721 AGMOQ6ZNB7 445 aa13.23□□□□□ -0.29
CNOT4-208ENST00000465721 CCDC148Q8NFR7 591 aa13.23□□□□□ -0.29
CNOT4-208ENST00000465721 BICD2Q8TD16 824 aa13.23□□□□□ -0.29
CNOT4-208ENST00000465721 RTP3Q9BQQ7 232 aa13.23□□□□□ -0.29
CNOT4-208ENST00000465721 EMILIN2Q9BXX0 1053 aa13.23□□□□□ -0.29
CNOT4-208ENST00000465721 AGPAT5Q9NUQ2 364 aa13.23□□□□□ -0.29
CNOT4-208ENST00000465721 VPS54Q9P1Q0 977 aa13.23□□□□□ -0.29
CNOT4-208ENST00000465721 FBXL21Q9UKT6 434 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms