RNA–Protein interactions for RNA: ENST00000465628.1

SCAP-209, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-209ENST00000465628 XIRP2A4UGR9 3374 aa17.29■□□□□ 0.36
SCAP-209ENST00000465628 LRRIQ4A6NIV6 560 aa17.29■□□□□ 0.36
SCAP-209ENST00000465628 EOMESO95936 686 aa17.29■□□□□ 0.36
SCAP-209ENST00000465628 SPATA31C1P0DKV0 1188 aa17.29■□□□□ 0.36
SCAP-209ENST00000465628 RPA1P27694 616 aa17.29■□□□□ 0.36
SCAP-209ENST00000465628 FXR2P51116 673 aaKnown RBP eCLIP17.29■□□□□ 0.36
SCAP-209ENST00000465628 ZRSR1Q15695 479 aaKnown RBP17.29■□□□□ 0.36
SCAP-209ENST00000465628 TMEM132AQ24JP5 1023 aa17.29■□□□□ 0.36
SCAP-209ENST00000465628 RILPL1Q5EBL4 403 aa17.29■□□□□ 0.36
SCAP-209ENST00000465628 CLLU1OSQ5K130 101 aa17.29■□□□□ 0.36
SCAP-209ENST00000465628 LARP1BQ659C4 914 aaKnown RBP17.29■□□□□ 0.36
SCAP-209ENST00000465628 MCPH1Q8NEM0 835 aa17.29■□□□□ 0.36
SCAP-209ENST00000465628 POF1BQ8WVV4 589 aa17.29■□□□□ 0.36
SCAP-209ENST00000465628 ZNF558Q96NG5 402 aa17.29■□□□□ 0.36
SCAP-209ENST00000465628 CASD1Q96PB1 797 aa17.29■□□□□ 0.36
SCAP-209ENST00000465628 IGFLR1Q9H665 355 aa17.29■□□□□ 0.36
SCAP-209ENST00000465628 MYO7AQ13402 2215 aa17.29■□□□□ 0.36
SCAP-209ENST00000465628 VPS37CA5D8V6 355 aaPredicted RBP17.28■□□□□ 0.36
SCAP-209ENST00000465628 LAD1O00515 517 aa17.28■□□□□ 0.36
SCAP-209ENST00000465628 FGF18O76093 207 aa17.28■□□□□ 0.36
SCAP-209ENST00000465628 ATF7P17544 494 aaPredicted RBP17.28■□□□□ 0.36
SCAP-209ENST00000465628 CA8P35219 290 aa17.28■□□□□ 0.36
SCAP-209ENST00000465628 PPM1AP35813 382 aa17.28■□□□□ 0.36
SCAP-209ENST00000465628 TOB1P50616 345 aaPredicted RBP17.28■□□□□ 0.36
SCAP-209ENST00000465628 RNASELQ05823 741 aaKnown RBP17.28■□□□□ 0.36
SCAP-209ENST00000465628 CAPSQ13938 189 aa17.28■□□□□ 0.36
SCAP-209ENST00000465628 KRT79Q5XKE5 535 aa17.28■□□□□ 0.36
SCAP-209ENST00000465628 DTHD1Q6ZMT9 781 aa17.28■□□□□ 0.36
SCAP-209ENST00000465628 URGCPQ8TCY9 931 aa17.28■□□□□ 0.36
SCAP-209ENST00000465628 PGBD4Q96DM1 585 aa17.28■□□□□ 0.36
SCAP-209ENST00000465628 BACH2Q9BYV9 841 aa17.28■□□□□ 0.36
SCAP-209ENST00000465628 TRIM6Q9C030 488 aaPredicted RBP17.28■□□□□ 0.36
SCAP-209ENST00000465628 MINDY3Q9H8M7 445 aa17.28■□□□□ 0.36
SCAP-209ENST00000465628 GPRC5CQ9NQ84 441 aa17.28■□□□□ 0.36
SCAP-209ENST00000465628 ENTPD7Q9NQZ7 604 aa17.28■□□□□ 0.36
SCAP-209ENST00000465628 RNF19AQ9NV58 838 aa17.28■□□□□ 0.36
SCAP-209ENST00000465628 DBR1Q9UK59 544 aaKnown RBP17.28■□□□□ 0.36
SCAP-209ENST00000465628 PCDHB2Q9Y5E7 798 aa17.28■□□□□ 0.36
SCAP-209ENST00000465628 STK24Q9Y6E0 443 aa17.28■□□□□ 0.36
SCAP-209ENST00000465628 TTC28Q96AY4 2481 aa17.27■□□□□ 0.36
SCAP-209ENST00000465628 H3BQ06 376 aaPredicted RBP17.27■□□□□ 0.36
SCAP-209ENST00000465628 ZC3H11AO75152 810 aaKnown RBP eCLIP17.27■□□□□ 0.36
SCAP-209ENST00000465628 XRCC6P12956 609 aaKnown RBP eCLIP17.27■□□□□ 0.36
SCAP-209ENST00000465628 GLRA2P23416 452 aa17.27■□□□□ 0.36
SCAP-209ENST00000465628 PBX3P40426 434 aa17.27■□□□□ 0.36
SCAP-209ENST00000465628 PTENP60484 403 aa17.27■□□□□ 0.36
SCAP-209ENST00000465628 NOTUMQ6P988 496 aa17.27■□□□□ 0.36
SCAP-209ENST00000465628 PADI6Q6TGC4 694 aa17.27■□□□□ 0.36
SCAP-209ENST00000465628 ZNF598Q86UK7 904 aaKnown RBP17.27■□□□□ 0.36
SCAP-209ENST00000465628 ZBTB8OSQ8IWT0 167 aa17.27■□□□□ 0.36
SCAP-209ENST00000465628 SPPL3Q8TCT6 385 aa17.27■□□□□ 0.36
SCAP-209ENST00000465628 PABPC5Q96DU9 382 aaKnown RBP17.27■□□□□ 0.36
SCAP-209ENST00000465628 NECAB3Q96P71 396 aaPredicted RBP17.27■□□□□ 0.36
SCAP-209ENST00000465628 GBP3Q9H0R5 595 aa17.27■□□□□ 0.36
SCAP-209ENST00000465628 CWH43Q9H720 699 aa17.27■□□□□ 0.36
SCAP-209ENST00000465628 TLR9Q9NR96 1032 aa17.27■□□□□ 0.36
SCAP-209ENST00000465628 SPTBN5Q9NRC6 3674 aaKnown RBP17.26■□□□□ 0.35
SCAP-209ENST00000465628 LIG1P18858 919 aa17.26■□□□□ 0.35
SCAP-209ENST00000465628 DNAJB1P25685 340 aa17.26■□□□□ 0.35
SCAP-209ENST00000465628 ARL2P36404 184 aa17.26■□□□□ 0.35
SCAP-209ENST00000465628 NDUFV1P49821 464 aa17.26■□□□□ 0.35
SCAP-209ENST00000465628 UBE3AQ05086 875 aa17.26■□□□□ 0.35
SCAP-209ENST00000465628 PCBP1Q15365 356 aaKnown RBP eCLIP17.26■□□□□ 0.35
SCAP-209ENST00000465628 KCNT2Q6UVM3 1135 aa17.26■□□□□ 0.35
SCAP-209ENST00000465628 CPB2Q96IY4 423 aa17.26■□□□□ 0.35
SCAP-209ENST00000465628 DDX19AQ9NUU7 478 aaKnown RBP17.26■□□□□ 0.35
SCAP-209ENST00000465628 PUF60Q9UHX1 559 aaKnown RBP17.26■□□□□ 0.35
SCAP-209ENST00000465628 KIAA1024Q9UPX6 916 aa17.26■□□□□ 0.35
SCAP-209ENST00000465628 PP2D1A8MPX8 630 aa17.25■□□□□ 0.35
SCAP-209ENST00000465628 TNFRSF10AO00220 468 aa17.25■□□□□ 0.35
SCAP-209ENST00000465628 NCK2O43639 380 aa17.25■□□□□ 0.35
SCAP-209ENST00000465628 TSPAN1O60635 241 aa17.25■□□□□ 0.35
SCAP-209ENST00000465628 MUTP22033 750 aa17.25■□□□□ 0.35
SCAP-209ENST00000465628 IRS1P35568 1242 aa17.25■□□□□ 0.35
SCAP-209ENST00000465628 PRPHP41219 470 aa17.25■□□□□ 0.35
SCAP-209ENST00000465628 ALDH7A1P49419 539 aaKnown RBP17.25■□□□□ 0.35
SCAP-209ENST00000465628 KRT17Q04695 432 aa17.25■□□□□ 0.35
SCAP-209ENST00000465628 MBTD1Q05BQ5 628 aa17.25■□□□□ 0.35
SCAP-209ENST00000465628 HYAL1Q12794 435 aa17.25■□□□□ 0.35
SCAP-209ENST00000465628 CLUL1Q15846 466 aa17.25■□□□□ 0.35
SCAP-209ENST00000465628 NOMO2Q5JPE7 1267 aa17.25■□□□□ 0.35
SCAP-209ENST00000465628 PLPP4Q5VZY2 271 aa17.25■□□□□ 0.35
SCAP-209ENST00000465628 LRRC55Q6ZSA7 311 aa17.25■□□□□ 0.35
SCAP-209ENST00000465628 RBM23Q86U06 439 aaKnown RBP17.25■□□□□ 0.35
SCAP-209ENST00000465628 HACE1Q8IYU2 909 aa17.25■□□□□ 0.35
SCAP-209ENST00000465628 C4orf32Q8N8J7 132 aa17.25■□□□□ 0.35
SCAP-209ENST00000465628 DEPTORQ8TB45 409 aa17.25■□□□□ 0.35
SCAP-209ENST00000465628 RSPH1Q8WYR4 309 aa17.25■□□□□ 0.35
SCAP-209ENST00000465628 CCDC51Q96ER9 411 aa17.25■□□□□ 0.35
SCAP-209ENST00000465628 CDK5RAP3Q96JB5 506 aa17.25■□□□□ 0.35
SCAP-209ENST00000465628 FAM193BQ96PV7 902 aaPredicted RBP17.25■□□□□ 0.35
SCAP-209ENST00000465628 TRAIPQ9BWF2 469 aa17.25■□□□□ 0.35
SCAP-209ENST00000465628 APOL6Q9BWW8 343 aa17.25■□□□□ 0.35
SCAP-209ENST00000465628 BHMT2Q9H2M3 363 aa17.25■□□□□ 0.35
SCAP-209ENST00000465628 RSAD1Q9HA92 442 aa17.25■□□□□ 0.35
SCAP-209ENST00000465628 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.25■□□□□ 0.35
SCAP-209ENST00000465628 SPG21Q9NZD8 308 aa17.25■□□□□ 0.35
SCAP-209ENST00000465628 PCDHGC5Q9Y5F6 944 aa17.25■□□□□ 0.35
SCAP-209ENST00000465628 VWA3AA6NCI4 1184 aa17.24■□□□□ 0.35
SCAP-209ENST00000465628 MEIS3P2A8K0S8 358 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms