RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 POTEGQ6S5H5 508 aa24.25■■□□□ 1.47
LIME1-203ENST00000465591 POLR3CQ9BUI4 534 aaPredicted RBP24.25■■□□□ 1.47
LIME1-203ENST00000465591 FAM105AQ9NUU6 356 aa24.25■■□□□ 1.47
LIME1-203ENST00000465591 NOL7Q9UMY1 257 aaKnown RBP24.25■■□□□ 1.47
LIME1-203ENST00000465591 ASAP2O43150 1006 aa24.24■■□□□ 1.47
LIME1-203ENST00000465591 USO1O60763 962 aaKnown RBP24.24■■□□□ 1.47
LIME1-203ENST00000465591 LAG3P18627 525 aa24.24■■□□□ 1.47
LIME1-203ENST00000465591 GJB2P29033 226 aa24.24■■□□□ 1.47
LIME1-203ENST00000465591 DLX2Q07687 328 aaPredicted RBP24.24■■□□□ 1.47
LIME1-203ENST00000465591 CAPSQ13938 189 aa24.24■■□□□ 1.47
LIME1-203ENST00000465591 ECM1Q16610 540 aa24.24■■□□□ 1.47
LIME1-203ENST00000465591 CTC1Q2NKJ3 1217 aa24.24■■□□□ 1.47
LIME1-203ENST00000465591 UBXN11Q5T124 520 aa24.24■■□□□ 1.47
LIME1-203ENST00000465591 ABI1Q8IZP0 508 aa24.24■■□□□ 1.47
LIME1-203ENST00000465591 LRRC43Q8N309 656 aa24.24■■□□□ 1.47
LIME1-203ENST00000465591 GPRC5CQ9NQ84 441 aa24.24■■□□□ 1.47
LIME1-203ENST00000465591 AAASQ9NRG9 546 aa24.24■■□□□ 1.47
LIME1-203ENST00000465591 CLDND1Q9NY35 253 aa24.24■■□□□ 1.47
LIME1-203ENST00000465591 LINC01565O15544 149 aa24.23■■□□□ 1.47
LIME1-203ENST00000465591 XRCC6P12956 609 aaKnown RBP eCLIP24.23■■□□□ 1.47
LIME1-203ENST00000465591 GLRA2P23416 452 aa24.23■■□□□ 1.47
LIME1-203ENST00000465591 PTENP60484 403 aa24.23■■□□□ 1.47
LIME1-203ENST00000465591 PTGDRQ13258 359 aa24.23■■□□□ 1.47
LIME1-203ENST00000465591 EP400NLQ6ZTU2 488 aa24.23■■□□□ 1.47
LIME1-203ENST00000465591 THNSL1Q8IYQ7 743 aa24.23■■□□□ 1.47
LIME1-203ENST00000465591 IGFLR1Q9H665 355 aa24.23■■□□□ 1.47
LIME1-203ENST00000465591 ZNF623O75123 536 aa24.22■■□□□ 1.47
LIME1-203ENST00000465591 RPA1P27694 616 aa24.22■■□□□ 1.47
LIME1-203ENST00000465591 FXR2P51116 673 aaKnown RBP eCLIP24.22■■□□□ 1.47
LIME1-203ENST00000465591 ERVFC1P60507 584 aa24.22■■□□□ 1.47
LIME1-203ENST00000465591 MXD4Q14582 209 aaPredicted RBP24.22■■□□□ 1.47
LIME1-203ENST00000465591 KCNT2Q6UVM3 1135 aa24.22■■□□□ 1.47
LIME1-203ENST00000465591 MAEAQ7L5Y9 396 aa24.22■■□□□ 1.47
LIME1-203ENST00000465591 CCDC43Q96MW1 224 aaKnown RBP24.22■■□□□ 1.47
LIME1-203ENST00000465591 POLR3FQ9H1D9 316 aaPredicted RBP24.22■■□□□ 1.47
LIME1-203ENST00000465591 DBR1Q9UK59 544 aaKnown RBP24.22■■□□□ 1.47
LIME1-203ENST00000465591 PCDHB2Q9Y5E7 798 aa24.22■■□□□ 1.47
LIME1-203ENST00000465591 IL9P15248 144 aa24.21■■□□□ 1.47
LIME1-203ENST00000465591 MCM2P49736 904 aa24.21■■□□□ 1.47
LIME1-203ENST00000465591 IL17AQ16552 155 aa24.21■■□□□ 1.47
LIME1-203ENST00000465591 MCTP1Q6DN14 999 aa24.21■■□□□ 1.47
LIME1-203ENST00000465591 IFNLR1Q8IU57 520 aaPredicted RBP24.21■■□□□ 1.47
LIME1-203ENST00000465591 NACC1Q96RE7 527 aa24.21■■□□□ 1.47
LIME1-203ENST00000465591 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.21■■□□□ 1.47
LIME1-203ENST00000465591 TSPAN1O60635 241 aa24.2■■□□□ 1.46
LIME1-203ENST00000465591 TBX10O75333 385 aa24.2■■□□□ 1.46
LIME1-203ENST00000465591 RAB27AP51159 221 aa24.2■■□□□ 1.46
LIME1-203ENST00000465591 UBE3AQ05086 875 aa24.2■■□□□ 1.46
LIME1-203ENST00000465591 MBTD1Q05BQ5 628 aa24.2■■□□□ 1.46
LIME1-203ENST00000465591 AMHR2Q16671 573 aa24.2■■□□□ 1.46
LIME1-203ENST00000465591 PTCRAQ6ISU1 281 aaPredicted RBP24.2■■□□□ 1.46
LIME1-203ENST00000465591 AGMOQ6ZNB7 445 aa24.2■■□□□ 1.46
LIME1-203ENST00000465591 ERMNQ8TAM6 284 aa24.2■■□□□ 1.46
LIME1-203ENST00000465591 ZNF558Q96NG5 402 aa24.2■■□□□ 1.46
LIME1-203ENST00000465591 TLR9Q9NR96 1032 aa24.2■■□□□ 1.46
LIME1-203ENST00000465591 KIF3AQ9Y496 699 aa24.2■■□□□ 1.46
LIME1-203ENST00000465591 INO80B-WBP1J3KQ70 363 aa24.19■■□□□ 1.46
LIME1-203ENST00000465591 FSCN2O14926 492 aa24.19■■□□□ 1.46
LIME1-203ENST00000465591 B4GALT3O60512 393 aa24.19■■□□□ 1.46
LIME1-203ENST00000465591 OFD1O75665 1012 aa24.19■■□□□ 1.46
LIME1-203ENST00000465591 SKIP12755 728 aa24.19■■□□□ 1.46
LIME1-203ENST00000465591 AFF1P51825 1210 aaKnown RBP24.19■■□□□ 1.46
LIME1-203ENST00000465591 PLCB3Q01970 1234 aa24.19■■□□□ 1.46
LIME1-203ENST00000465591 POU5F1BQ06416 359 aa24.19■■□□□ 1.46
LIME1-203ENST00000465591 ADAM15Q13444 863 aa24.19■■□□□ 1.46
LIME1-203ENST00000465591 TFDP1Q14186 410 aa24.19■■□□□ 1.46
LIME1-203ENST00000465591 CSPP1Q1MSJ5 1256 aa24.19■■□□□ 1.46
LIME1-203ENST00000465591 MRPL10Q7Z7H8 261 aaKnown RBP24.19■■□□□ 1.46
LIME1-203ENST00000465591 RBM23Q86U06 439 aaKnown RBP24.19■■□□□ 1.46
LIME1-203ENST00000465591 IGSF22Q8N9C0 903 aa24.19■■□□□ 1.46
LIME1-203ENST00000465591 MRPS27Q92552 414 aaKnown RBP24.19■■□□□ 1.46
LIME1-203ENST00000465591 CPB2Q96IY4 423 aa24.19■■□□□ 1.46
LIME1-203ENST00000465591 CD320Q9NPF0 282 aa24.19■■□□□ 1.46
LIME1-203ENST00000465591 INPP5FQ9Y2H2 1132 aa24.19■■□□□ 1.46
LIME1-203ENST00000465591 GRXCR2A6NFK2 248 aa24.18■■□□□ 1.46
LIME1-203ENST00000465591 PP2D1A8MPX8 630 aa24.18■■□□□ 1.46
LIME1-203ENST00000465591 NT5C1B-RDH14C9J2C7 533 aa24.18■■□□□ 1.46
LIME1-203ENST00000465591 NCK2O43639 380 aa24.18■■□□□ 1.46
LIME1-203ENST00000465591 CCT6AP40227 531 aaKnown RBP24.18■■□□□ 1.46
LIME1-203ENST00000465591 NRIP1P48552 1158 aa24.18■■□□□ 1.46
LIME1-203ENST00000465591 CLUL1Q15846 466 aa24.18■■□□□ 1.46
LIME1-203ENST00000465591 SLC39A11Q8N1S5 342 aa24.18■■□□□ 1.46
LIME1-203ENST00000465591 SMG8Q8ND04 991 aaKnown RBP24.18■■□□□ 1.46
LIME1-203ENST00000465591 BSNDQ8WZ55 320 aa24.18■■□□□ 1.46
LIME1-203ENST00000465591 EIF2AQ9BY44 585 aaKnown RBP24.18■■□□□ 1.46
LIME1-203ENST00000465591 MRPL9Q9BYD2 267 aaKnown RBP24.18■■□□□ 1.46
LIME1-203ENST00000465591 TBC1D13Q9NVG8 400 aa24.18■■□□□ 1.46
LIME1-203ENST00000465591 LRWD1Q9UFC0 647 aa24.18■■□□□ 1.46
LIME1-203ENST00000465591 SMC3Q9UQE7 1217 aa24.18■■□□□ 1.46
LIME1-203ENST00000465591 PER2O15055 1255 aa24.17■■□□□ 1.46
LIME1-203ENST00000465591 B4GALT5O43286 388 aa24.17■■□□□ 1.46
LIME1-203ENST00000465591 ERLIN2O94905 339 aa24.17■■□□□ 1.46
LIME1-203ENST00000465591 GLP2RO95838 553 aa24.17■■□□□ 1.46
LIME1-203ENST00000465591 BCAR1P56945 870 aa24.17■■□□□ 1.46
LIME1-203ENST00000465591 NOMO2Q5JPE7 1267 aa24.17■■□□□ 1.46
LIME1-203ENST00000465591 PADI6Q6TGC4 694 aa24.17■■□□□ 1.46
LIME1-203ENST00000465591 GLB1LQ6UWU2 654 aa24.17■■□□□ 1.46
LIME1-203ENST00000465591 TMEM173Q86WV6 379 aaPredicted RBP24.17■■□□□ 1.46
LIME1-203ENST00000465591 MICAL1Q8TDZ2 1067 aa24.17■■□□□ 1.46
LIME1-203ENST00000465591 NFKBIZQ9BYH8 718 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 812.2 ms