RNA–Protein interactions for RNA: ENST00000464870.5

PTPN7-205, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 4

Gene PTPN7, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-205	ENST00000464870	CD44	P16070	742 aa	Known RBP	13.6	□□□□□ -0.23
PTPN7-205	ENST00000464870	KCNJ6	P48051	423 aa		13.6	□□□□□ -0.23
PTPN7-205	ENST00000464870	CLCN3	P51790	818 aa		13.6	□□□□□ -0.23
PTPN7-205	ENST00000464870	MGAT3	Q09327	533 aa		13.6	□□□□□ -0.23
PTPN7-205	ENST00000464870	TMEM62	Q0P6H9	643 aa		13.6	□□□□□ -0.23
PTPN7-205	ENST00000464870	STX1A	Q16623	288 aa		13.6	□□□□□ -0.23
PTPN7-205	ENST00000464870	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.6	□□□□□ -0.23
PTPN7-205	ENST00000464870	RASIP1	Q5U651	963 aa		13.6	□□□□□ -0.23
PTPN7-205	ENST00000464870	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.6	□□□□□ -0.23
PTPN7-205	ENST00000464870	GAS2L3	Q86XJ1	694 aa		13.6	□□□□□ -0.23
PTPN7-205	ENST00000464870	USP38	Q8NB14	1042 aa		13.6	□□□□□ -0.23
PTPN7-205	ENST00000464870	DBF4B	Q8NFT6	615 aa		13.6	□□□□□ -0.23
PTPN7-205	ENST00000464870	ASAP3	Q8TDY4	903 aa		13.6	□□□□□ -0.23
PTPN7-205	ENST00000464870	SLC7A3	Q8WY07	619 aa		13.6	□□□□□ -0.23
PTPN7-205	ENST00000464870	SEPT8	Q92599	483 aa		13.6	□□□□□ -0.23
PTPN7-205	ENST00000464870	APBB2	Q92870	758 aa		13.6	□□□□□ -0.23
PTPN7-205	ENST00000464870	ANP32E	Q9BTT0	268 aa		13.6	□□□□□ -0.23
PTPN7-205	ENST00000464870	DNAJC25	Q9H1X3	360 aa		13.6	□□□□□ -0.23
PTPN7-205	ENST00000464870	TSPY26P	Q9H489	355 aa		13.6	□□□□□ -0.23
PTPN7-205	ENST00000464870	PARVG	Q9HBI0	331 aa		13.6	□□□□□ -0.23
PTPN7-205	ENST00000464870	ANO10	Q9NW15	660 aa		13.6	□□□□□ -0.23
PTPN7-205	ENST00000464870	CXXC1	Q9P0U4	656 aa	Predicted RBP	13.6	□□□□□ -0.23
PTPN7-205	ENST00000464870	ODF2L	Q9ULJ1	636 aa		13.6	□□□□□ -0.23
PTPN7-205	ENST00000464870	MAPK8IP1	Q9UQF2	711 aa		13.6	□□□□□ -0.23
PTPN7-205	ENST00000464870	AKT3	Q9Y243	479 aa		13.6	□□□□□ -0.23
PTPN7-205	ENST00000464870	GINS2	Q9Y248	185 aa		13.6	□□□□□ -0.23
PTPN7-205	ENST00000464870	COL4A3BP	Q9Y5P4	624 aa		13.6	□□□□□ -0.23
PTPN7-205	ENST00000464870	SQOR	Q9Y6N5	450 aa		13.6	□□□□□ -0.23
PTPN7-205	ENST00000464870	TRIOBP	Q9H2D6	2365 aa		13.59	□□□□□ -0.23
PTPN7-205	ENST00000464870	IGKV6-21	A0A0C4DH24	114 aa		13.59	□□□□□ -0.23
PTPN7-205	ENST00000464870	VTN	P04004	478 aa		13.59	□□□□□ -0.23
PTPN7-205	ENST00000464870	GHR	P10912	638 aa		13.59	□□□□□ -0.23
PTPN7-205	ENST00000464870	GAP43	P17677	238 aa		13.59	□□□□□ -0.23
PTPN7-205	ENST00000464870	NMT1	P30419	496 aa	Known RBP	13.59	□□□□□ -0.23
PTPN7-205	ENST00000464870	ARL2	P36404	184 aa		13.59	□□□□□ -0.23
PTPN7-205	ENST00000464870	FXR1	P51114	621 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
PTPN7-205	ENST00000464870	ZNF131	P52739	623 aa		13.59	□□□□□ -0.23
PTPN7-205	ENST00000464870	PEX3	P56589	373 aa		13.59	□□□□□ -0.23
PTPN7-205	ENST00000464870	SMAD3	P84022	425 aa	Known RBP	13.59	□□□□□ -0.23
PTPN7-205	ENST00000464870	CDC42EP1	Q00587	391 aa		13.59	□□□□□ -0.23
PTPN7-205	ENST00000464870	ANO6	Q4KMQ2	910 aa		13.59	□□□□□ -0.23
PTPN7-205	ENST00000464870	PLEKHG4	Q58EX7	1191 aa		13.59	□□□□□ -0.23
PTPN7-205	ENST00000464870	FBXO47	Q5MNV8	452 aa		13.59	□□□□□ -0.23
PTPN7-205	ENST00000464870	FAM26F	Q5R3K3	315 aa		13.59	□□□□□ -0.23
PTPN7-205	ENST00000464870	TRIML1	Q8N9V2	468 aa		13.59	□□□□□ -0.23
PTPN7-205	ENST00000464870	KIAA0895	Q8NCT3	520 aa		13.59	□□□□□ -0.23
PTPN7-205	ENST00000464870	MCPH1	Q8NEM0	835 aa		13.59	□□□□□ -0.23
PTPN7-205	ENST00000464870	TIPIN	Q9BVW5	301 aa		13.59	□□□□□ -0.23
PTPN7-205	ENST00000464870	IFIH1	Q9BYX4	1025 aa	Known RBP	13.59	□□□□□ -0.23
PTPN7-205	ENST00000464870	ARID2	Q68CP9	1835 aa		13.59	□□□□□ -0.23
PTPN7-205	ENST00000464870	LOXHD1	Q8IVV2	1947 aa		13.58	□□□□□ -0.23
PTPN7-205	ENST00000464870	PPP1R3G	B7ZBB8	358 aa		13.58	□□□□□ -0.24
PTPN7-205	ENST00000464870	SOX1	O00570	391 aa	Predicted RBP	13.58	□□□□□ -0.24
PTPN7-205	ENST00000464870	MYB	P10242	640 aa		13.58	□□□□□ -0.24
PTPN7-205	ENST00000464870	PLS3	P13797	630 aa		13.58	□□□□□ -0.24
PTPN7-205	ENST00000464870	ATP2A2	P16615	1042 aa	Known RBP	13.58	□□□□□ -0.24
PTPN7-205	ENST00000464870	GLRA2	P23416	452 aa		13.58	□□□□□ -0.24
PTPN7-205	ENST00000464870	PRCP	P42785	496 aa		13.58	□□□□□ -0.24
PTPN7-205	ENST00000464870	CASP5	P51878	434 aa		13.58	□□□□□ -0.24
PTPN7-205	ENST00000464870	CRYBB1	P53674	252 aa	Predicted RBP	13.58	□□□□□ -0.24
PTPN7-205	ENST00000464870	LPIN1	Q14693	890 aa		13.58	□□□□□ -0.24
PTPN7-205	ENST00000464870	KIZ	Q2M2Z5	673 aa		13.58	□□□□□ -0.24
PTPN7-205	ENST00000464870	ODR4	Q5SWX8	454 aa		13.58	□□□□□ -0.24
PTPN7-205	ENST00000464870	TSHZ1	Q6ZSZ6	1077 aa		13.58	□□□□□ -0.24
PTPN7-205	ENST00000464870	KSR1	Q8IVT5	923 aa		13.58	□□□□□ -0.24
PTPN7-205	ENST00000464870	LINC01465	Q8N7H1	131 aa		13.58	□□□□□ -0.24
PTPN7-205	ENST00000464870	PHOSPHO2	Q8TCD6	241 aa		13.58	□□□□□ -0.24
PTPN7-205	ENST00000464870	KIFAP3	Q92845	792 aa		13.58	□□□□□ -0.24
PTPN7-205	ENST00000464870	ZNF668	Q96K58	619 aa	Predicted RBP	13.58	□□□□□ -0.24
PTPN7-205	ENST00000464870	DRC1	Q96MC2	740 aa		13.58	□□□□□ -0.24
PTPN7-205	ENST00000464870	SCLT1	Q96NL6	688 aa		13.58	□□□□□ -0.24
PTPN7-205	ENST00000464870	FIZ1	Q96SL8	496 aa		13.58	□□□□□ -0.24
PTPN7-205	ENST00000464870	KIFC3	Q9BVG8	833 aa		13.58	□□□□□ -0.24
PTPN7-205	ENST00000464870	MRPL44	Q9H9J2	332 aa	Known RBP	13.58	□□□□□ -0.24
PTPN7-205	ENST00000464870	SUCLA2	Q9P2R7	463 aa	Predicted RBP	13.58	□□□□□ -0.24
PTPN7-205	ENST00000464870	CCDC169	A6NNP5	214 aa		13.57	□□□□□ -0.24
PTPN7-205	ENST00000464870	SLC16A4	O15374	487 aa		13.57	□□□□□ -0.24
PTPN7-205	ENST00000464870	GAS2	O43903	313 aa	Known RBP	13.57	□□□□□ -0.24
PTPN7-205	ENST00000464870	PRPF6	O94906	941 aa	Known RBP	13.57	□□□□□ -0.24
PTPN7-205	ENST00000464870	NPTX2	P47972	431 aa		13.57	□□□□□ -0.24
PTPN7-205	ENST00000464870	NLRP11	P59045	1033 aa	Known RBP	13.57	□□□□□ -0.24
PTPN7-205	ENST00000464870	PSMD2	Q13200	908 aa		13.57	□□□□□ -0.24
PTPN7-205	ENST00000464870	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	13.57	□□□□□ -0.24
PTPN7-205	ENST00000464870	KLHL10	Q6JEL2	608 aa		13.57	□□□□□ -0.24
PTPN7-205	ENST00000464870	FAM43B	Q6ZT52	329 aa	Predicted RBP	13.57	□□□□□ -0.24
PTPN7-205	ENST00000464870	PRPF31	Q8WWY3	499 aa	Known RBP	13.57	□□□□□ -0.24
PTPN7-205	ENST00000464870	LRCH3	Q96II8	777 aa		13.57	□□□□□ -0.24
PTPN7-205	ENST00000464870	PPP1R16B	Q96T49	567 aa		13.57	□□□□□ -0.24
PTPN7-205	ENST00000464870	SLC9A7	Q96T83	725 aa		13.57	□□□□□ -0.24
PTPN7-205	ENST00000464870	OSBPL7	Q9BZF2	842 aa		13.57	□□□□□ -0.24
PTPN7-205	ENST00000464870	KAT6A	Q92794	2004 aa		13.56	□□□□□ -0.24
PTPN7-205	ENST00000464870	EVPL	Q92817	2033 aa		13.56	□□□□□ -0.24
PTPN7-205	ENST00000464870	RBAK-RBAKDN	I3L0D1	243 aa		13.56	□□□□□ -0.24
PTPN7-205	ENST00000464870	GPR182	O15218	404 aa		13.56	□□□□□ -0.24
PTPN7-205	ENST00000464870	GPR32	O75388	356 aa		13.56	□□□□□ -0.24
PTPN7-205	ENST00000464870	RPS6KA5	O75582	802 aa		13.56	□□□□□ -0.24
PTPN7-205	ENST00000464870	GCNT3	O95395	438 aa		13.56	□□□□□ -0.24
PTPN7-205	ENST00000464870	AMH	P03971	560 aa		13.56	□□□□□ -0.24
PTPN7-205	ENST00000464870	CD52	P31358	61 aa		13.56	□□□□□ -0.24
PTPN7-205	ENST00000464870	STX17	P56962	302 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms