RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 SLC5A5Q92911 643 aa16.44■□□□□ 0.22
MCF2L-220ENST00000464800 INO80BQ9C086 356 aaPredicted RBP16.44■□□□□ 0.22
MCF2L-220ENST00000464800 GBP3Q9H0R5 595 aa16.44■□□□□ 0.22
MCF2L-220ENST00000464800 FAM105AQ9NUU6 356 aa16.44■□□□□ 0.22
MCF2L-220ENST00000464800 STK39Q9UEW8 545 aa16.44■□□□□ 0.22
MCF2L-220ENST00000464800 A0A087WZ62 844 aa16.43■□□□□ 0.22
MCF2L-220ENST00000464800 PRPF3O43395 683 aaKnown RBP16.43■□□□□ 0.22
MCF2L-220ENST00000464800 TDGQ13569 410 aa16.43■□□□□ 0.22
MCF2L-220ENST00000464800 XKR3Q5GH77 459 aa16.43■□□□□ 0.22
MCF2L-220ENST00000464800 MIER3Q7Z3K6 550 aa16.43■□□□□ 0.22
MCF2L-220ENST00000464800 GPR149Q86SP6 731 aa16.43■□□□□ 0.22
MCF2L-220ENST00000464800 RHPN2Q8IUC4 686 aa16.43■□□□□ 0.22
MCF2L-220ENST00000464800 RDM1Q8NG50 284 aa16.43■□□□□ 0.22
MCF2L-220ENST00000464800 FDXACB1Q9BRP7 624 aaPredicted RBP16.43■□□□□ 0.22
MCF2L-220ENST00000464800 VN1R3Q9BXE9 311 aa16.43■□□□□ 0.22
MCF2L-220ENST00000464800 EMILIN2Q9BXX0 1053 aa16.43■□□□□ 0.22
MCF2L-220ENST00000464800 NIFKQ9BYG3 293 aaKnown RBP16.43■□□□□ 0.22
MCF2L-220ENST00000464800 DNAJB4Q9UDY4 337 aa16.43■□□□□ 0.22
MCF2L-220ENST00000464800 FBXL21Q9UKT6 434 aa16.43■□□□□ 0.22
MCF2L-220ENST00000464800 DUSP12Q9UNI6 340 aa16.43■□□□□ 0.22
MCF2L-220ENST00000464800 MYO15AQ9UKN7 3530 aa16.43■□□□□ 0.22
MCF2L-220ENST00000464800 IGKV6-21A0A0C4DH24 114 aa16.42■□□□□ 0.22
MCF2L-220ENST00000464800 MEIS3P2A8K0S8 358 aa16.42■□□□□ 0.22
MCF2L-220ENST00000464800 OFD1O75665 1012 aa16.42■□□□□ 0.22
MCF2L-220ENST00000464800 AOC1P19801 751 aa16.42■□□□□ 0.22
MCF2L-220ENST00000464800 KLRC2P26717 231 aa16.42■□□□□ 0.22
MCF2L-220ENST00000464800 SLC11A1P49279 550 aa16.42■□□□□ 0.22
MCF2L-220ENST00000464800 USP11P51784 963 aa16.42■□□□□ 0.22
MCF2L-220ENST00000464800 CATSPER4Q7RTX7 472 aa16.42■□□□□ 0.22
MCF2L-220ENST00000464800 CCDC105Q8IYK2 499 aa16.42■□□□□ 0.22
MCF2L-220ENST00000464800 FEZF2Q8TBJ5 459 aa16.42■□□□□ 0.22
MCF2L-220ENST00000464800 URGCPQ8TCY9 931 aa16.42■□□□□ 0.22
MCF2L-220ENST00000464800 PHKBQ93100 1093 aa16.42■□□□□ 0.22
MCF2L-220ENST00000464800 GJA10Q969M2 543 aa16.42■□□□□ 0.22
MCF2L-220ENST00000464800 PGBD4Q96DM1 585 aa16.42■□□□□ 0.22
MCF2L-220ENST00000464800 TMEM150BA6NC51 233 aa16.41■□□□□ 0.22
MCF2L-220ENST00000464800 ZNF623O75123 536 aa16.41■□□□□ 0.22
MCF2L-220ENST00000464800 PSMD10O75832 226 aa16.41■□□□□ 0.22
MCF2L-220ENST00000464800 SSBP05455 408 aaKnown RBP eCLIP16.41■□□□□ 0.22
MCF2L-220ENST00000464800 CLCN4P51793 760 aa16.41■□□□□ 0.22
MCF2L-220ENST00000464800 LETM2Q2VYF4 491 aa16.41■□□□□ 0.22
MCF2L-220ENST00000464800 BMP2KLQ5H9B9 411 aa16.41■□□□□ 0.22
MCF2L-220ENST00000464800 Q6ZUG5 572 aa16.41■□□□□ 0.22
MCF2L-220ENST00000464800 ERMP1Q7Z2K6 904 aa16.41■□□□□ 0.22
MCF2L-220ENST00000464800 ADSSL1Q8N142 457 aa16.41■□□□□ 0.22
MCF2L-220ENST00000464800 SIX5Q8N196 739 aa16.41■□□□□ 0.22
MCF2L-220ENST00000464800 BRF1Q92994 677 aa16.41■□□□□ 0.22
MCF2L-220ENST00000464800 NLRP4Q96MN2 994 aa16.41■□□□□ 0.22
MCF2L-220ENST00000464800 KLHL5Q96PQ7 755 aa16.41■□□□□ 0.22
MCF2L-220ENST00000464800 CEP89Q96ST8 783 aa16.41■□□□□ 0.22
MCF2L-220ENST00000464800 RTP3Q9BQQ7 232 aa16.41■□□□□ 0.22
MCF2L-220ENST00000464800 SH2D3AQ9BRG2 576 aa16.41■□□□□ 0.22
MCF2L-220ENST00000464800 RNF26Q9BY78 433 aaPredicted RBP16.41■□□□□ 0.22
MCF2L-220ENST00000464800 KCNK12Q9HB15 430 aa16.41■□□□□ 0.22
MCF2L-220ENST00000464800 VPS54Q9P1Q0 977 aa16.41■□□□□ 0.22
MCF2L-220ENST00000464800 SUCLA2Q9P2R7 463 aaPredicted RBP16.41■□□□□ 0.22
MCF2L-220ENST00000464800 EDIL3O43854 480 aa16.4■□□□□ 0.22
MCF2L-220ENST00000464800 B4GALT3O60512 393 aa16.4■□□□□ 0.22
MCF2L-220ENST00000464800 CNPP09543 421 aaKnown RBP16.4■□□□□ 0.22
MCF2L-220ENST00000464800 CPA1P15085 419 aa16.4■□□□□ 0.22
MCF2L-220ENST00000464800 NPR3P17342 541 aa16.4■□□□□ 0.22
MCF2L-220ENST00000464800 ANGPT1Q15389 498 aa16.4■□□□□ 0.22
MCF2L-220ENST00000464800 C15orf39Q6ZRI6 1047 aa16.4■□□□□ 0.22
MCF2L-220ENST00000464800 ZNF280BQ86YH2 543 aa16.4■□□□□ 0.22
MCF2L-220ENST00000464800 FAM193BQ96PV7 902 aaPredicted RBP16.4■□□□□ 0.22
MCF2L-220ENST00000464800 MRPL17Q9NRX2 175 aaKnown RBP16.4■□□□□ 0.22
MCF2L-220ENST00000464800 AGPAT5Q9NUQ2 364 aa16.4■□□□□ 0.22
MCF2L-220ENST00000464800 IGSF9Q9P2J2 1179 aa16.4■□□□□ 0.22
MCF2L-220ENST00000464800 PCDHB2Q9Y5E7 798 aa16.4■□□□□ 0.22
MCF2L-220ENST00000464800 GVINP1Q7Z2Y8 2422 aa16.39■□□□□ 0.21
MCF2L-220ENST00000464800 DDX11L8A8MPP1 907 aa16.39■□□□□ 0.21
MCF2L-220ENST00000464800 PI15O43692 258 aa16.39■□□□□ 0.21
MCF2L-220ENST00000464800 MAFO75444 373 aaPredicted RBP16.39■□□□□ 0.21
MCF2L-220ENST00000464800 STBD1O95210 358 aa16.39■□□□□ 0.21
MCF2L-220ENST00000464800 ID4P47928 161 aa16.39■□□□□ 0.21
MCF2L-220ENST00000464800 Q4G0T1 1027 aa16.39■□□□□ 0.21
MCF2L-220ENST00000464800 KSR1Q8IVT5 923 aa16.39■□□□□ 0.21
MCF2L-220ENST00000464800 DTWD2Q8NBA8 298 aa16.39■□□□□ 0.21
MCF2L-220ENST00000464800 TBCKQ8TEA7 893 aa16.39■□□□□ 0.21
MCF2L-220ENST00000464800 JPH2Q9BR39 696 aaPredicted RBP16.39■□□□□ 0.21
MCF2L-220ENST00000464800 TMEM175Q9BSA9 504 aa16.39■□□□□ 0.21
MCF2L-220ENST00000464800 SLC26A6Q9BXS9 759 aa16.39■□□□□ 0.21
MCF2L-220ENST00000464800 C22orf23Q9BZE7 217 aa16.39■□□□□ 0.21
MCF2L-220ENST00000464800 RSAD1Q9HA92 442 aa16.39■□□□□ 0.21
MCF2L-220ENST00000464800 ARID2Q68CP9 1835 aa16.39■□□□□ 0.21
MCF2L-220ENST00000464800 TDRD15B5MCY1 1934 aaKnown RBP16.39■□□□□ 0.21
MCF2L-220ENST00000464800 DDHD2O94830 711 aa16.38■□□□□ 0.21
MCF2L-220ENST00000464800 URODP06132 367 aa16.38■□□□□ 0.21
MCF2L-220ENST00000464800 NLRP5P59047 1200 aa16.38■□□□□ 0.21
MCF2L-220ENST00000464800 NTRK3Q16288 839 aa16.38■□□□□ 0.21
MCF2L-220ENST00000464800 ELMSAN1Q6PJG2 1045 aa16.38■□□□□ 0.21
MCF2L-220ENST00000464800 AGMOQ6ZNB7 445 aa16.38■□□□□ 0.21
MCF2L-220ENST00000464800 JAKMIP1Q96N16 626 aaKnown RBP16.38■□□□□ 0.21
MCF2L-220ENST00000464800 IFT122Q9HBG6 1241 aa16.38■□□□□ 0.21
MCF2L-220ENST00000464800 MAN1C1Q9NR34 630 aa16.38■□□□□ 0.21
MCF2L-220ENST00000464800 SH3GLB2Q9NR46 395 aa16.38■□□□□ 0.21
MCF2L-220ENST00000464800 KANSL3Q9P2N6 904 aa16.38■□□□□ 0.21
MCF2L-220ENST00000464800 FAN1Q9Y2M0 1017 aa16.38■□□□□ 0.21
MCF2L-220ENST00000464800 CNTNAP2Q9UHC6 1331 aa16.38■□□□□ 0.21
MCF2L-220ENST00000464800 VPS13AQ96RL7 3174 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms