RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 TMC7Q7Z402 723 aa16.24■□□□□ 0.19
ALMS1-202ENST00000464408 PRPF31Q8WWY3 499 aaKnown RBP16.24■□□□□ 0.19
ALMS1-202ENST00000464408 AUTS2Q8WXX7 1259 aa16.24■□□□□ 0.19
ALMS1-202ENST00000464408 RPGRIP1Q96KN7 1286 aa16.24■□□□□ 0.19
ALMS1-202ENST00000464408 DHX33Q9H6R0 707 aaKnown RBP16.24■□□□□ 0.19
ALMS1-202ENST00000464408 FAM105AQ9NUU6 356 aa16.24■□□□□ 0.19
ALMS1-202ENST00000464408 PUF60Q9UHX1 559 aaKnown RBP16.24■□□□□ 0.19
ALMS1-202ENST00000464408 INPP5FQ9Y2H2 1132 aa16.24■□□□□ 0.19
ALMS1-202ENST00000464408 ARIH1Q9Y4X5 557 aaPredicted RBP16.24■□□□□ 0.19
ALMS1-202ENST00000464408 COL4A3BPQ9Y5P4 624 aa16.24■□□□□ 0.19
ALMS1-202ENST00000464408 C2orf71A6NGG8 1288 aa16.23■□□□□ 0.19
ALMS1-202ENST00000464408 XBP1P17861 261 aa16.23■□□□□ 0.19
ALMS1-202ENST00000464408 SP100P23497 879 aaPredicted RBP16.23■□□□□ 0.19
ALMS1-202ENST00000464408 YWHABP31946 246 aaKnown RBP16.23■□□□□ 0.19
ALMS1-202ENST00000464408 POLGP54098 1239 aaPredicted RBP16.23■□□□□ 0.19
ALMS1-202ENST00000464408 ANAPC15P60006 121 aa16.23■□□□□ 0.19
ALMS1-202ENST00000464408 CDC42EP1Q00587 391 aa16.23■□□□□ 0.19
ALMS1-202ENST00000464408 KRT17Q04695 432 aa16.23■□□□□ 0.19
ALMS1-202ENST00000464408 ST3GAL1Q11201 340 aa16.23■□□□□ 0.19
ALMS1-202ENST00000464408 CBX2Q14781 532 aaPredicted RBP16.23■□□□□ 0.19
ALMS1-202ENST00000464408 EPHA7Q15375 998 aa16.23■□□□□ 0.19
ALMS1-202ENST00000464408 FEZF2Q8TBJ5 459 aa16.23■□□□□ 0.19
ALMS1-202ENST00000464408 GTF3C6Q969F1 213 aa16.23■□□□□ 0.19
ALMS1-202ENST00000464408 TRAIPQ9BWF2 469 aa16.23■□□□□ 0.19
ALMS1-202ENST00000464408 PHF7Q9BWX1 381 aaPredicted RBP16.23■□□□□ 0.19
ALMS1-202ENST00000464408 MRPL9Q9BYD2 267 aaKnown RBP16.23■□□□□ 0.19
ALMS1-202ENST00000464408 NRDE2Q9H7Z3 1164 aa16.23■□□□□ 0.19
ALMS1-202ENST00000464408 NGRNQ9NPE2 291 aaKnown RBP16.23■□□□□ 0.19
ALMS1-202ENST00000464408 TBC1D13Q9NVG8 400 aa16.23■□□□□ 0.19
ALMS1-202ENST00000464408 DNAJB4Q9UDY4 337 aa16.23■□□□□ 0.19
ALMS1-202ENST00000464408 ZDBF2Q9HCK1 2354 aa16.23■□□□□ 0.19
ALMS1-202ENST00000464408 PIEZO1Q92508 2521 aa16.22■□□□□ 0.19
ALMS1-202ENST00000464408 MYO10Q9HD67 2058 aa16.22■□□□□ 0.19
ALMS1-202ENST00000464408 TBX3O15119 743 aa16.22■□□□□ 0.19
ALMS1-202ENST00000464408 OFD1O75665 1012 aa16.22■□□□□ 0.19
ALMS1-202ENST00000464408 CA8P35219 290 aa16.22■□□□□ 0.19
ALMS1-202ENST00000464408 KRT2P35908 639 aa16.22■□□□□ 0.19
ALMS1-202ENST00000464408 AFF1P51825 1210 aaKnown RBP16.22■□□□□ 0.19
ALMS1-202ENST00000464408 LAMTOR4Q0VGL1 99 aa16.22■□□□□ 0.19
ALMS1-202ENST00000464408 SMC1AQ14683 1233 aaKnown RBP16.22■□□□□ 0.19
ALMS1-202ENST00000464408 EMC2Q15006 297 aa16.22■□□□□ 0.19
ALMS1-202ENST00000464408 NOMO2Q5JPE7 1267 aa16.22■□□□□ 0.19
ALMS1-202ENST00000464408 UBXN11Q5T124 520 aa16.22■□□□□ 0.19
ALMS1-202ENST00000464408 C4orf19Q8IY42 314 aa16.22■□□□□ 0.19
ALMS1-202ENST00000464408 MRPL43Q8N983 215 aaKnown RBP16.22■□□□□ 0.19
ALMS1-202ENST00000464408 NSUN7Q8NE18 718 aaKnown RBP16.22■□□□□ 0.19
ALMS1-202ENST00000464408 SLC7A3Q8WY07 619 aa16.22■□□□□ 0.19
ALMS1-202ENST00000464408 VN1R3Q9BXE9 311 aa16.22■□□□□ 0.19
ALMS1-202ENST00000464408 GBP3Q9H0R5 595 aa16.22■□□□□ 0.19
ALMS1-202ENST00000464408 XPNPEP1Q9NQW7 623 aa16.22■□□□□ 0.19
ALMS1-202ENST00000464408 AGPAT5Q9NUQ2 364 aa16.22■□□□□ 0.19
ALMS1-202ENST00000464408 PPP4R2Q9NY27 417 aa16.22■□□□□ 0.19
ALMS1-202ENST00000464408 PCDHB2Q9Y5E7 798 aa16.22■□□□□ 0.19
ALMS1-202ENST00000464408 A0A087WWV3 80 aa16.21■□□□□ 0.19
ALMS1-202ENST00000464408 BTBD18B2RXH4 712 aa16.21■□□□□ 0.19
ALMS1-202ENST00000464408 MARCH6O60337 910 aa16.21■□□□□ 0.19
ALMS1-202ENST00000464408 CLASP2O75122 1294 aaKnown RBP16.21■□□□□ 0.19
ALMS1-202ENST00000464408 SEC24BO95487 1268 aa16.21■□□□□ 0.19
ALMS1-202ENST00000464408 HOXA11P31270 313 aaPredicted RBP16.21■□□□□ 0.19
ALMS1-202ENST00000464408 HOXD11P31277 338 aaPredicted RBP16.21■□□□□ 0.19
ALMS1-202ENST00000464408 SLC11A1P49279 550 aa16.21■□□□□ 0.19
ALMS1-202ENST00000464408 ALDH7A1P49419 539 aaKnown RBP16.21■□□□□ 0.19
ALMS1-202ENST00000464408 XKR9Q5GH70 373 aa16.21■□□□□ 0.19
ALMS1-202ENST00000464408 KANK3Q6NY19 840 aa16.21■□□□□ 0.19
ALMS1-202ENST00000464408 GLB1LQ6UWU2 654 aa16.21■□□□□ 0.19
ALMS1-202ENST00000464408 AGMOQ6ZNB7 445 aa16.21■□□□□ 0.19
ALMS1-202ENST00000464408 ZNF280BQ86YH2 543 aa16.21■□□□□ 0.19
ALMS1-202ENST00000464408 VPS52Q8N1B4 723 aa16.21■□□□□ 0.19
ALMS1-202ENST00000464408 PSPC1Q8WXF1 523 aaKnown RBP16.21■□□□□ 0.19
ALMS1-202ENST00000464408 EDAQ92838 391 aa16.21■□□□□ 0.19
ALMS1-202ENST00000464408 TMEM169Q96HH4 297 aa16.21■□□□□ 0.19
ALMS1-202ENST00000464408 JPH2Q9BR39 696 aaPredicted RBP16.21■□□□□ 0.19
ALMS1-202ENST00000464408 INO80BQ9C086 356 aaPredicted RBP16.21■□□□□ 0.19
ALMS1-202ENST00000464408 ZBP1Q9H171 429 aa16.21■□□□□ 0.19
ALMS1-202ENST00000464408 HCFC2Q9Y5Z7 792 aa16.21■□□□□ 0.19
ALMS1-202ENST00000464408 ZNF623O75123 536 aa16.2■□□□□ 0.18
ALMS1-202ENST00000464408 DDHD2O94830 711 aa16.2■□□□□ 0.18
ALMS1-202ENST00000464408 SLITRK3O94933 977 aa16.2■□□□□ 0.18
ALMS1-202ENST00000464408 CXCL14O95715 111 aa16.2■□□□□ 0.18
ALMS1-202ENST00000464408 GALTP07902 379 aa16.2■□□□□ 0.18
ALMS1-202ENST00000464408 WEE2P0C1S8 567 aa16.2■□□□□ 0.18
ALMS1-202ENST00000464408 RFC5P40937 340 aa16.2■□□□□ 0.18
ALMS1-202ENST00000464408 RAB27AP51159 221 aa16.2■□□□□ 0.18
ALMS1-202ENST00000464408 ANKRD1Q15327 319 aa16.2■□□□□ 0.18
ALMS1-202ENST00000464408 FERMT3Q86UX7 667 aa16.2■□□□□ 0.18
ALMS1-202ENST00000464408 TPH2Q8IWU9 490 aa16.2■□□□□ 0.18
ALMS1-202ENST00000464408 RNF149Q8NC42 400 aa16.2■□□□□ 0.18
ALMS1-202ENST00000464408 WASF1Q92558 559 aa16.2■□□□□ 0.18
ALMS1-202ENST00000464408 IGSF21Q96ID5 467 aa16.2■□□□□ 0.18
ALMS1-202ENST00000464408 EIF2AK1Q9BQI3 630 aaKnown RBP16.2■□□□□ 0.18
ALMS1-202ENST00000464408 ZSWIM4Q9H7M6 989 aa16.2■□□□□ 0.18
ALMS1-202ENST00000464408 KMT2EQ8IZD2 1858 aa16.2■□□□□ 0.18
ALMS1-202ENST00000464408 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.19■□□□□ 0.18
ALMS1-202ENST00000464408 FSD2A1L4K1 749 aa16.19■□□□□ 0.18
ALMS1-202ENST00000464408 DKC1O60832 514 aaKnown RBP eCLIP16.19■□□□□ 0.18
ALMS1-202ENST00000464408 EPCAMP16422 314 aa16.19■□□□□ 0.18
ALMS1-202ENST00000464408 NEK4P51957 841 aa16.19■□□□□ 0.18
ALMS1-202ENST00000464408 ZXDAP98168 799 aa16.19■□□□□ 0.18
ALMS1-202ENST00000464408 TRIM67Q6ZTA4 783 aa16.19■□□□□ 0.18
ALMS1-202ENST00000464408 SRGAP1Q7Z6B7 1085 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms