RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 SNAPC2Q13487 334 aa23.68■■□□□ 1.38
PDLIM2-216ENST00000464275 IRF2BP2Q7Z5L9 587 aa23.68■■□□□ 1.38
PDLIM2-216ENST00000464275 RDH13Q8NBN7 331 aa23.68■■□□□ 1.38
PDLIM2-216ENST00000464275 BSNDQ8WZ55 320 aa23.68■■□□□ 1.38
PDLIM2-216ENST00000464275 PARD6BQ9BYG5 372 aa23.68■■□□□ 1.38
PDLIM2-216ENST00000464275 XPNPEP1Q9NQW7 623 aa23.68■■□□□ 1.38
PDLIM2-216ENST00000464275 KCNG1Q9UIX4 513 aa23.68■■□□□ 1.38
PDLIM2-216ENST00000464275 UNCXA6NJT0 531 aa23.67■■□□□ 1.38
PDLIM2-216ENST00000464275 OATP04181 439 aa23.67■■□□□ 1.38
PDLIM2-216ENST00000464275 TRIM49P0CI25 452 aa23.67■■□□□ 1.38
PDLIM2-216ENST00000464275 TRIM49CP0CI26 452 aa23.67■■□□□ 1.38
PDLIM2-216ENST00000464275 ABCD1P33897 745 aa23.67■■□□□ 1.38
PDLIM2-216ENST00000464275 PLA2G4AP47712 749 aa23.67■■□□□ 1.38
PDLIM2-216ENST00000464275 AMPD2Q01433 879 aa23.67■■□□□ 1.38
PDLIM2-216ENST00000464275 MYL7Q01449 175 aa23.67■■□□□ 1.38
PDLIM2-216ENST00000464275 MTERF2Q49AM1 385 aa23.67■■□□□ 1.38
PDLIM2-216ENST00000464275 MSL3Q8N5Y2 521 aaKnown RBP23.67■■□□□ 1.38
PDLIM2-216ENST00000464275 IFT74Q96LB3 600 aa23.67■■□□□ 1.38
PDLIM2-216ENST00000464275 UBXN6Q9BZV1 441 aa23.67■■□□□ 1.38
PDLIM2-216ENST00000464275 DENND3A2RUS2 1198 aa23.67■■□□□ 1.38
PDLIM2-216ENST00000464275 N4BP1O75113 896 aaKnown RBP23.67■■□□□ 1.38
PDLIM2-216ENST00000464275 FARP2O94887 1054 aaPredicted RBP23.67■■□□□ 1.38
PDLIM2-216ENST00000464275 PRKCIP41743 596 aa23.67■■□□□ 1.38
PDLIM2-216ENST00000464275 VAMP7P51809 220 aa23.67■■□□□ 1.38
PDLIM2-216ENST00000464275 SLC18A3Q16572 532 aa23.67■■□□□ 1.38
PDLIM2-216ENST00000464275 Q3C1V9 767 aa23.67■■□□□ 1.38
PDLIM2-216ENST00000464275 CBWD6Q4V339 395 aa23.67■■□□□ 1.38
PDLIM2-216ENST00000464275 CBWD3Q5JTY5 395 aa23.67■■□□□ 1.38
PDLIM2-216ENST00000464275 CBWD5Q5RIA9 395 aa23.67■■□□□ 1.38
PDLIM2-216ENST00000464275 MSANTD4Q8NCY6 345 aa23.67■■□□□ 1.38
PDLIM2-216ENST00000464275 SLC10A4Q96EP9 437 aa23.67■■□□□ 1.38
PDLIM2-216ENST00000464275 MROH8Q9H579 483 aa23.67■■□□□ 1.38
PDLIM2-216ENST00000464275 DUSP10Q9Y6W6 482 aa23.67■■□□□ 1.38
PDLIM2-216ENST00000464275 PLXNB2O15031 1838 aa23.66■■□□□ 1.38
PDLIM2-216ENST00000464275 H0YCG3 227 aa23.66■■□□□ 1.38
PDLIM2-216ENST00000464275 ATP4AP20648 1035 aa23.66■■□□□ 1.38
PDLIM2-216ENST00000464275 GJA5P36382 358 aa23.66■■□□□ 1.38
PDLIM2-216ENST00000464275 ARID5AQ03989 594 aa23.66■■□□□ 1.38
PDLIM2-216ENST00000464275 KCTD2Q14681 263 aa23.66■■□□□ 1.38
PDLIM2-216ENST00000464275 TAF3Q5VWG9 929 aa23.66■■□□□ 1.38
PDLIM2-216ENST00000464275 IQCEQ6IPM2 695 aa23.66■■□□□ 1.38
PDLIM2-216ENST00000464275 MMP19Q99542 508 aa23.66■■□□□ 1.38
PDLIM2-216ENST00000464275 RAB21Q9UL25 225 aa23.66■■□□□ 1.38
PDLIM2-216ENST00000464275 GSTTP1A0A1W2PQM5 241 aa23.65■■□□□ 1.38
PDLIM2-216ENST00000464275 ANO9A1A5B4 782 aa23.65■■□□□ 1.38
PDLIM2-216ENST00000464275 MACROD2A1Z1Q3 448 aa23.65■■□□□ 1.38
PDLIM2-216ENST00000464275 P4HA2O15460 535 aa23.65■■□□□ 1.38
PDLIM2-216ENST00000464275 TACC1O75410 805 aa23.65■■□□□ 1.38
PDLIM2-216ENST00000464275 ERLIN1O75477 346 aa23.65■■□□□ 1.38
PDLIM2-216ENST00000464275 TBC1D8O95759 1140 aa23.65■■□□□ 1.38
PDLIM2-216ENST00000464275 ANXA13P27216 316 aa23.65■■□□□ 1.38
PDLIM2-216ENST00000464275 MCCD1P59942 119 aaPredicted RBP23.65■■□□□ 1.38
PDLIM2-216ENST00000464275 KCNV1Q6PIU1 500 aa23.65■■□□□ 1.38
PDLIM2-216ENST00000464275 TRIM58Q8NG06 486 aa23.65■■□□□ 1.38
PDLIM2-216ENST00000464275 NIFKQ9BYG3 293 aaKnown RBP23.65■■□□□ 1.38
PDLIM2-216ENST00000464275 INTS2Q9H0H0 1204 aaKnown RBP23.65■■□□□ 1.38
PDLIM2-216ENST00000464275 POLR3FQ9H1D9 316 aaPredicted RBP23.65■■□□□ 1.38
PDLIM2-216ENST00000464275 R3HDMLQ9H3Y0 253 aa23.65■■□□□ 1.38
PDLIM2-216ENST00000464275 AJAP1Q9UKB5 411 aaPredicted RBP23.65■■□□□ 1.38
PDLIM2-216ENST00000464275 UTRNP46939 3433 aa23.65■■□□□ 1.38
PDLIM2-216ENST00000464275 DNAJC25-GNG10A0A024R161 153 aa23.65■■□□□ 1.38
PDLIM2-216ENST00000464275 GRIN3BO60391 1043 aa23.65■■□□□ 1.38
PDLIM2-216ENST00000464275 SOX10P56693 466 aa23.65■■□□□ 1.38
PDLIM2-216ENST00000464275 EMC2Q15006 297 aa23.65■■□□□ 1.38
PDLIM2-216ENST00000464275 FAM160B1Q5W0V3 765 aa23.65■■□□□ 1.38
PDLIM2-216ENST00000464275 PAPD7Q5XG87 772 aaKnown RBP23.65■■□□□ 1.38
PDLIM2-216ENST00000464275 TRAPPC11Q7Z392 1133 aa23.65■■□□□ 1.38
PDLIM2-216ENST00000464275 ZNF526Q8TF50 670 aaPredicted RBP23.65■■□□□ 1.38
PDLIM2-216ENST00000464275 GTF3C2Q8WUA4 911 aaPredicted RBP23.65■■□□□ 1.38
PDLIM2-216ENST00000464275 KIFC3Q9BVG8 833 aa23.65■■□□□ 1.38
PDLIM2-216ENST00000464275 PNMA3Q9UL41 463 aa23.65■■□□□ 1.38
PDLIM2-216ENST00000464275 ANKRD63C9JTQ0 380 aa23.64■■□□□ 1.38
PDLIM2-216ENST00000464275 FERP16591 822 aa23.64■■□□□ 1.38
PDLIM2-216ENST00000464275 STAT1P42224 750 aa23.64■■□□□ 1.38
PDLIM2-216ENST00000464275 POLGP54098 1239 aaPredicted RBP23.64■■□□□ 1.38
PDLIM2-216ENST00000464275 CETN1Q12798 172 aa23.64■■□□□ 1.38
PDLIM2-216ENST00000464275 C10orf76Q5T2E6 689 aa23.64■■□□□ 1.38
PDLIM2-216ENST00000464275 SHCBP1Q8NEM2 672 aa23.64■■□□□ 1.38
PDLIM2-216ENST00000464275 FGD4Q96M96 766 aa23.64■■□□□ 1.38
PDLIM2-216ENST00000464275 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.64■■□□□ 1.38
PDLIM2-216ENST00000464275 CLEC11AQ9Y240 323 aa23.64■■□□□ 1.38
PDLIM2-216ENST00000464275 EMSYQ7Z589 1322 aa23.64■■□□□ 1.37
PDLIM2-216ENST00000464275 CNGA1P29973 690 aa23.63■■□□□ 1.37
PDLIM2-216ENST00000464275 GJB7Q6PEY0 223 aa23.63■■□□□ 1.37
PDLIM2-216ENST00000464275 FMNL3Q8IVF7 1028 aa23.63■■□□□ 1.37
PDLIM2-216ENST00000464275 RNF10Q8N5U6 811 aaKnown RBP23.63■■□□□ 1.37
PDLIM2-216ENST00000464275 STK33Q9BYT3 514 aa23.63■■□□□ 1.37
PDLIM2-216ENST00000464275 NRBP2Q9NSY0 501 aa23.63■■□□□ 1.37
PDLIM2-216ENST00000464275 A0A087X0T9 212 aa23.63■■□□□ 1.37
PDLIM2-216ENST00000464275 LOC102724159A0A0B4J2E5 919 aa23.63■■□□□ 1.37
PDLIM2-216ENST00000464275 SOCS7O14512 581 aa23.63■■□□□ 1.37
PDLIM2-216ENST00000464275 GGPS1O95749 300 aa23.63■■□□□ 1.37
PDLIM2-216ENST00000464275 ATP1A1P05023 1023 aaKnown RBP23.63■■□□□ 1.37
PDLIM2-216ENST00000464275 PGK2P07205 417 aa23.63■■□□□ 1.37
PDLIM2-216ENST00000464275 FAM228BP0C875 321 aa23.63■■□□□ 1.37
PDLIM2-216ENST00000464275 SCP2P22307 547 aa23.63■■□□□ 1.37
PDLIM2-216ENST00000464275 RFX1P22670 979 aa23.63■■□□□ 1.37
PDLIM2-216ENST00000464275 ERVK-9P63128 1117 aa23.63■■□□□ 1.37
PDLIM2-216ENST00000464275 PTK2Q05397 1052 aa23.63■■□□□ 1.37
PDLIM2-216ENST00000464275 PWP2Q15269 919 aaKnown RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms