RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 FAM205CA6NFA0 338 aa16.05■□□□□ 0.16
SNRNP40-203ENST00000463988 DTNBO60941 627 aa16.05■□□□□ 0.16
SNRNP40-203ENST00000463988 LYPLA2O95372 231 aa16.05■□□□□ 0.16
SNRNP40-203ENST00000463988 ALDH7A1P49419 539 aaKnown RBP16.05■□□□□ 0.16
SNRNP40-203ENST00000463988 PLPP4Q5VZY2 271 aa16.05■□□□□ 0.16
SNRNP40-203ENST00000463988 NCAPH2Q6IBW4 605 aa16.05■□□□□ 0.16
SNRNP40-203ENST00000463988 GLB1LQ6UWU2 654 aa16.05■□□□□ 0.16
SNRNP40-203ENST00000463988 VN1R2Q8NFZ6 395 aa16.05■□□□□ 0.16
SNRNP40-203ENST00000463988 DYDC2Q96IM9 177 aa16.05■□□□□ 0.16
SNRNP40-203ENST00000463988 HSD17B14Q9BPX1 270 aa16.05■□□□□ 0.16
SNRNP40-203ENST00000463988 ENTPD7Q9NQZ7 604 aa16.05■□□□□ 0.16
SNRNP40-203ENST00000463988 AGPAT5Q9NUQ2 364 aa16.05■□□□□ 0.16
SNRNP40-203ENST00000463988 FAM105AQ9NUU6 356 aa16.05■□□□□ 0.16
SNRNP40-203ENST00000463988 PCDHA12Q9UN75 941 aa16.05■□□□□ 0.16
SNRNP40-203ENST00000463988 C5orf42Q9H799 3197 aa16.04■□□□□ 0.16
SNRNP40-203ENST00000463988 BTBD18B2RXH4 712 aa16.04■□□□□ 0.16
SNRNP40-203ENST00000463988 SLITRK3O94933 977 aa16.04■□□□□ 0.16
SNRNP40-203ENST00000463988 PLA2G5P39877 138 aa16.04■□□□□ 0.16
SNRNP40-203ENST00000463988 PBX3P40426 434 aa16.04■□□□□ 0.16
SNRNP40-203ENST00000463988 BCAR1P56945 870 aa16.04■□□□□ 0.16
SNRNP40-203ENST00000463988 LAMTOR4Q0VGL1 99 aa16.04■□□□□ 0.16
SNRNP40-203ENST00000463988 TRIM29Q14134 588 aa16.04■□□□□ 0.16
SNRNP40-203ENST00000463988 BMS1Q14692 1282 aaKnown RBP16.04■□□□□ 0.16
SNRNP40-203ENST00000463988 EMC2Q15006 297 aa16.04■□□□□ 0.16
SNRNP40-203ENST00000463988 PCBP1Q15365 356 aaKnown RBP eCLIP16.04■□□□□ 0.16
SNRNP40-203ENST00000463988 HERC4Q5GLZ8 1057 aaPredicted RBP16.04■□□□□ 0.16
SNRNP40-203ENST00000463988 TMC7Q7Z402 723 aa16.04■□□□□ 0.16
SNRNP40-203ENST00000463988 DIS3L2Q8IYB7 885 aaKnown RBP16.04■□□□□ 0.16
SNRNP40-203ENST00000463988 MRPL43Q8N983 215 aaKnown RBP16.04■□□□□ 0.16
SNRNP40-203ENST00000463988 SUSD6Q92537 303 aa16.04■□□□□ 0.16
SNRNP40-203ENST00000463988 TMEM143Q96AN5 459 aa16.04■□□□□ 0.16
SNRNP40-203ENST00000463988 PGBD4Q96DM1 585 aa16.04■□□□□ 0.16
SNRNP40-203ENST00000463988 USP15Q9Y4E8 981 aaPredicted RBP16.04■□□□□ 0.16
SNRNP40-203ENST00000463988 MUC6Q6W4X9 2439 aa16.04■□□□□ 0.16
SNRNP40-203ENST00000463988 HIDE1A8MVS5 230 aa16.03■□□□□ 0.16
SNRNP40-203ENST00000463988 LOC730098B7Z3J9 87 aa16.03■□□□□ 0.16
SNRNP40-203ENST00000463988 SRGAP2CP0DJJ0 459 aa16.03■□□□□ 0.16
SNRNP40-203ENST00000463988 HOXB8P17481 243 aaPredicted RBP16.03■□□□□ 0.16
SNRNP40-203ENST00000463988 CTTNQ14247 550 aaKnown RBP16.03■□□□□ 0.16
SNRNP40-203ENST00000463988 MXD4Q14582 209 aaPredicted RBP16.03■□□□□ 0.16
SNRNP40-203ENST00000463988 SMC1AQ14683 1233 aaKnown RBP16.03■□□□□ 0.16
SNRNP40-203ENST00000463988 CBX2Q14781 532 aaPredicted RBP16.03■□□□□ 0.16
SNRNP40-203ENST00000463988 CALCRLQ16602 461 aa16.03■□□□□ 0.16
SNRNP40-203ENST00000463988 XKR9Q5GH70 373 aa16.03■□□□□ 0.16
SNRNP40-203ENST00000463988 NOMO2Q5JPE7 1267 aa16.03■□□□□ 0.16
SNRNP40-203ENST00000463988 ANKRD54Q6NXT1 300 aa16.03■□□□□ 0.16
SNRNP40-203ENST00000463988 MRPL10Q7Z7H8 261 aaKnown RBP16.03■□□□□ 0.16
SNRNP40-203ENST00000463988 FERMT3Q86UX7 667 aa16.03■□□□□ 0.16
SNRNP40-203ENST00000463988 RNF135Q8IUD6 432 aa16.03■□□□□ 0.16
SNRNP40-203ENST00000463988 TPH2Q8IWU9 490 aa16.03■□□□□ 0.16
SNRNP40-203ENST00000463988 FAM122AQ96E09 287 aa16.03■□□□□ 0.16
SNRNP40-203ENST00000463988 TMEM169Q96HH4 297 aa16.03■□□□□ 0.16
SNRNP40-203ENST00000463988 EIF2AK1Q9BQI3 630 aaKnown RBP16.03■□□□□ 0.16
SNRNP40-203ENST00000463988 PHF7Q9BWX1 381 aaPredicted RBP16.03■□□□□ 0.16
SNRNP40-203ENST00000463988 ANKEF1Q9NU02 776 aa16.03■□□□□ 0.16
SNRNP40-203ENST00000463988 PCDHB2Q9Y5E7 798 aa16.03■□□□□ 0.16
SNRNP40-203ENST00000463988 PIEZO1Q92508 2521 aa16.03■□□□□ 0.16
SNRNP40-203ENST00000463988 NEMFO60524 1076 aa16.02■□□□□ 0.16
SNRNP40-203ENST00000463988 JAK2O60674 1132 aa16.02■□□□□ 0.16
SNRNP40-203ENST00000463988 OFD1O75665 1012 aa16.02■□□□□ 0.16
SNRNP40-203ENST00000463988 HOXA11P31270 313 aaPredicted RBP16.02■□□□□ 0.16
SNRNP40-203ENST00000463988 RBM10P98175 930 aaKnown RBP16.02■□□□□ 0.16
SNRNP40-203ENST00000463988 CYP4A11Q02928 519 aa16.02■□□□□ 0.16
SNRNP40-203ENST00000463988 POU5F1BQ06416 359 aa16.02■□□□□ 0.16
SNRNP40-203ENST00000463988 RNF149Q8NC42 400 aa16.02■□□□□ 0.16
SNRNP40-203ENST00000463988 LPPQ93052 612 aa16.02■□□□□ 0.16
SNRNP40-203ENST00000463988 MTMR9Q96QG7 549 aa16.02■□□□□ 0.16
SNRNP40-203ENST00000463988 MTRQ99707 1265 aa16.02■□□□□ 0.16
SNRNP40-203ENST00000463988 S1PR5Q9H228 398 aa16.02■□□□□ 0.16
SNRNP40-203ENST00000463988 TTC12Q9H892 705 aaPredicted RBP16.02■□□□□ 0.16
SNRNP40-203ENST00000463988 MINDY3Q9H8M7 445 aa16.02■□□□□ 0.16
SNRNP40-203ENST00000463988 TBC1D13Q9NVG8 400 aa16.02■□□□□ 0.16
SNRNP40-203ENST00000463988 STK39Q9UEW8 545 aa16.02■□□□□ 0.16
SNRNP40-203ENST00000463988 CNTNAP2Q9UHC6 1331 aa16.01■□□□□ 0.15
SNRNP40-203ENST00000463988 C2orf71A6NGG8 1288 aa16.01■□□□□ 0.15
SNRNP40-203ENST00000463988 ZBTB39O15060 712 aa16.01■□□□□ 0.15
SNRNP40-203ENST00000463988 ZC3H11AO75152 810 aaKnown RBP eCLIP16.01■□□□□ 0.15
SNRNP40-203ENST00000463988 DGAT1O75907 488 aa16.01■□□□□ 0.15
SNRNP40-203ENST00000463988 XRCC6P12956 609 aaKnown RBP eCLIP16.01■□□□□ 0.15
SNRNP40-203ENST00000463988 AXLP30530 894 aa16.01■□□□□ 0.15
SNRNP40-203ENST00000463988 TECP42680 631 aa16.01■□□□□ 0.15
SNRNP40-203ENST00000463988 GIT2Q14161 759 aa16.01■□□□□ 0.15
SNRNP40-203ENST00000463988 AGMOQ6ZNB7 445 aa16.01■□□□□ 0.15
SNRNP40-203ENST00000463988 DDX53Q86TM3 631 aaKnown RBP16.01■□□□□ 0.15
SNRNP40-203ENST00000463988 IFNLR1Q8IU57 520 aaPredicted RBP16.01■□□□□ 0.15
SNRNP40-203ENST00000463988 CNNM3Q8NE01 707 aa16.01■□□□□ 0.15
SNRNP40-203ENST00000463988 CASP10Q92851 521 aa16.01■□□□□ 0.15
SNRNP40-203ENST00000463988 IGSF21Q96ID5 467 aa16.01■□□□□ 0.15
SNRNP40-203ENST00000463988 NRDE2Q9H7Z3 1164 aa16.01■□□□□ 0.15
SNRNP40-203ENST00000463988 XPNPEP1Q9NQW7 623 aa16.01■□□□□ 0.15
SNRNP40-203ENST00000463988 KANSL3Q9P2N6 904 aa16.01■□□□□ 0.15
SNRNP40-203ENST00000463988 MUTYHQ9UIF7 546 aa16.01■□□□□ 0.15
SNRNP40-203ENST00000463988 LIMCH1Q9UPQ0 1083 aa16.01■□□□□ 0.15
SNRNP40-203ENST00000463988 IRAK3Q9Y616 596 aa16.01■□□□□ 0.15
SNRNP40-203ENST00000463988 TRIOO75962 3097 aa16■□□□□ 0.15
SNRNP40-203ENST00000463988 MEIS3P2A8K0S8 358 aa16■□□□□ 0.15
SNRNP40-203ENST00000463988 NT5C1B-RDH14C9J2C7 533 aa16■□□□□ 0.15
SNRNP40-203ENST00000463988 SEC24BO95487 1268 aa16■□□□□ 0.15
SNRNP40-203ENST00000463988 GALTP07902 379 aa16■□□□□ 0.15
SNRNP40-203ENST00000463988 TXKP42681 527 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms