RNA–Protein interactions for RNA: ENST00000463634.6

PRPF4B-203, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 2,590 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-203ENST00000463634 SOX5P35711 763 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 VAMP7P51809 220 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 SP2Q02086 613 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 CNTN2Q02246 1040 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 MYBPC2Q14324 1141 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 CCDC181Q5TID7 509 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 INTS8Q75QN2 995 aaKnown RBP8.79□□□□□ -1
PRPF4B-203ENST00000463634 GLYCTKQ8IVS8 523 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 XXYLT1Q8NBI6 393 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 TMEM161BQ8NDZ6 487 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 SPATA4Q8NEY3 305 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 LMO3Q8TAP4 145 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 LNX1Q8TBB1 728 aaPredicted RBP8.79□□□□□ -1
PRPF4B-203ENST00000463634 ZNF526Q8TF50 670 aaPredicted RBP8.79□□□□□ -1
PRPF4B-203ENST00000463634 HDAC7Q8WUI4 952 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 SENP7Q9BQF6 1050 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 HOXC10Q9NYD6 342 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 NENFQ9UMX5 172 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 L1RE1Q9UN81 338 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 PPP2R3BQ9Y5P8 575 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 PFASO15067 1338 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 LCTP09848 1927 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 DENND3A2RUS2 1198 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 MAP2K7O14733 419 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 MAFGO15525 162 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 ADRB2P07550 413 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 FERP16591 822 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 ACTR2P61160 394 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 SMC1AQ14683 1233 aaKnown RBP8.79□□□□□ -1
PRPF4B-203ENST00000463634 CBWD2Q8IUF1 395 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 C12orf56Q8IXR9 622 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 GSPT2Q8IYD1 628 aaKnown RBP8.79□□□□□ -1
PRPF4B-203ENST00000463634 RDM1Q8NG50 284 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 U2AF1L4Q8WU68 220 aaKnown RBP8.79□□□□□ -1
PRPF4B-203ENST00000463634 SAAL1Q96ER3 474 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 TIPINQ9BVW5 301 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 ST6GALNAC4Q9H4F1 302 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 SLC9A2Q9UBY0 812 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 SEPT9Q9UHD8 586 aaPredicted RBP8.79□□□□□ -1
PRPF4B-203ENST00000463634 TBX20Q9UMR3 447 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 ADGRA3Q8IWK6 1321 aa8.79□□□□□ -1
PRPF4B-203ENST00000463634 TMCO5BA8MYB1 307 aa8.78□□□□□ -1
PRPF4B-203ENST00000463634 POLR3GO15318 223 aaPredicted RBP8.78□□□□□ -1
PRPF4B-203ENST00000463634 PSAPP07602 524 aa8.78□□□□□ -1
PRPF4B-203ENST00000463634 MYBL2P10244 700 aa8.78□□□□□ -1
PRPF4B-203ENST00000463634 NOP2P46087 812 aaKnown RBP8.78□□□□□ -1
PRPF4B-203ENST00000463634 PRKCEQ02156 737 aa8.78□□□□□ -1
PRPF4B-203ENST00000463634 DMP1Q13316 513 aaPredicted RBP8.78□□□□□ -1
PRPF4B-203ENST00000463634 C10orf76Q5T2E6 689 aa8.78□□□□□ -1
PRPF4B-203ENST00000463634 MEI1Q5TIA1 1274 aa8.78□□□□□ -1
PRPF4B-203ENST00000463634 ZNF572Q7Z3I7 529 aaPredicted RBP8.78□□□□□ -1
PRPF4B-203ENST00000463634 VPS36Q86VN1 386 aa8.78□□□□□ -1
PRPF4B-203ENST00000463634 ARHGEF19Q8IW93 802 aa8.78□□□□□ -1
PRPF4B-203ENST00000463634 ATP6V0A1Q93050 837 aa8.78□□□□□ -1
PRPF4B-203ENST00000463634 LRRC1Q9BTT6 524 aa8.78□□□□□ -1
PRPF4B-203ENST00000463634 UBXN6Q9BZV1 441 aa8.78□□□□□ -1
PRPF4B-203ENST00000463634 ZCCHC17Q9NP64 241 aaKnown RBP8.78□□□□□ -1
PRPF4B-203ENST00000463634 KMT5AQ9NQR1 393 aa8.78□□□□□ -1
PRPF4B-203ENST00000463634 PCNTO95613 3336 aa8.78□□□□□ -1
PRPF4B-203ENST00000463634 WDR81Q562E7 1941 aa8.78□□□□□ -1
PRPF4B-203ENST00000463634 SPATA31C2B4DYI2 1134 aa8.78□□□□□ -1
PRPF4B-203ENST00000463634 FOXN3O00409 490 aaPredicted RBP8.78□□□□□ -1
PRPF4B-203ENST00000463634 CNGA1P29973 690 aa8.78□□□□□ -1
PRPF4B-203ENST00000463634 SMTNP53814 917 aa8.78□□□□□ -1
PRPF4B-203ENST00000463634 GNPTABQ3T906 1256 aa8.78□□□□□ -1
PRPF4B-203ENST00000463634 SH3D19Q5HYK7 790 aa8.78□□□□□ -1
PRPF4B-203ENST00000463634 ABHD15Q6UXT9 468 aa8.78□□□□□ -1
PRPF4B-203ENST00000463634 CYFIP1Q7L576 1253 aa8.78□□□□□ -1
PRPF4B-203ENST00000463634 OTUD6AQ7L8S5 288 aa8.78□□□□□ -1
PRPF4B-203ENST00000463634 HDXQ7Z353 690 aa8.78□□□□□ -1
PRPF4B-203ENST00000463634 PALB2Q86YC2 1186 aa8.78□□□□□ -1
PRPF4B-203ENST00000463634 ANKRD35Q8N283 1001 aa8.78□□□□□ -1
PRPF4B-203ENST00000463634 SLC30A5Q8TAD4 765 aa8.78□□□□□ -1
PRPF4B-203ENST00000463634 TMEM174Q8WUU8 243 aa8.78□□□□□ -1
PRPF4B-203ENST00000463634 CCDC127Q96BQ5 260 aa8.78□□□□□ -1
PRPF4B-203ENST00000463634 GDAP1L1Q96MZ0 367 aa8.78□□□□□ -1
PRPF4B-203ENST00000463634 TSPYL1Q9H0U9 437 aa8.78□□□□□ -1
PRPF4B-203ENST00000463634 UBE2TQ9NPD8 197 aaPredicted RBP8.78□□□□□ -1
PRPF4B-203ENST00000463634 RBM12Q9NTZ6 932 aaKnown RBP8.78□□□□□ -1
PRPF4B-203ENST00000463634 BTBD7Q9P203 1132 aa8.78□□□□□ -1
PRPF4B-203ENST00000463634 NFASCO94856 1347 aa8.78□□□□□ -1
PRPF4B-203ENST00000463634 TARSL2A2RTX5 802 aaKnown RBP8.77□□□□□ -1
PRPF4B-203ENST00000463634 LRRIQ3A6PVS8 624 aaPredicted RBP8.77□□□□□ -1
PRPF4B-203ENST00000463634 BTNL10A8MVZ5 291 aa8.77□□□□□ -1
PRPF4B-203ENST00000463634 H3BQF6 201 aa8.77□□□□□ -1
PRPF4B-203ENST00000463634 TUBBP07437 444 aa8.77□□□□□ -1
PRPF4B-203ENST00000463634 H2AFZP0C0S5 128 aa8.77□□□□□ -1
PRPF4B-203ENST00000463634 OAS2P29728 719 aaKnown RBP8.77□□□□□ -1
PRPF4B-203ENST00000463634 RNASE9P60153 205 aaKnown RBP8.77□□□□□ -1
PRPF4B-203ENST00000463634 SLC7A5Q01650 507 aa8.77□□□□□ -1
PRPF4B-203ENST00000463634 CASP8Q14790 479 aa8.77□□□□□ -1
PRPF4B-203ENST00000463634 SNRNP35Q16560 246 aaKnown RBP8.77□□□□□ -1
PRPF4B-203ENST00000463634 EPC2Q52LR7 807 aa8.77□□□□□ -1
PRPF4B-203ENST00000463634 SLC39A4Q6P5W5 647 aa8.77□□□□□ -1
PRPF4B-203ENST00000463634 H2AFVQ71UI9 128 aa8.77□□□□□ -1
PRPF4B-203ENST00000463634 MAP4K3Q8IVH8 894 aa8.77□□□□□ -1
PRPF4B-203ENST00000463634 MMGT1Q8N4V1 131 aa8.77□□□□□ -1
PRPF4B-203ENST00000463634 KAT5Q92993 513 aa8.77□□□□□ -1
PRPF4B-203ENST00000463634 CDHR1Q96JP9 859 aa8.77□□□□□ -1
PRPF4B-203ENST00000463634 POP1Q99575 1024 aaKnown RBP8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms