RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 ARID5AQ03989 594 aa4.58□□□□□ -1.68
SCFD1-204ENST00000463622 DLX2Q07687 328 aaPredicted RBP4.58□□□□□ -1.68
SCFD1-204ENST00000463622 GRAPQ13588 217 aa4.58□□□□□ -1.68
SCFD1-204ENST00000463622 FXNQ16595 210 aa4.58□□□□□ -1.68
SCFD1-204ENST00000463622 NGEFQ8N5V2 710 aa4.58□□□□□ -1.68
SCFD1-204ENST00000463622 GRAPLQ8TC17 118 aaPredicted RBP4.58□□□□□ -1.68
SCFD1-204ENST00000463622 RTF1Q92541 710 aaKnown RBP4.58□□□□□ -1.68
SCFD1-204ENST00000463622 ZBTB8AQ96BR9 441 aa4.58□□□□□ -1.68
SCFD1-204ENST00000463622 ARMC5Q96C12 935 aa4.58□□□□□ -1.68
SCFD1-204ENST00000463622 GMLQ99445 158 aa4.58□□□□□ -1.68
SCFD1-204ENST00000463622 LUC7LQ9NQ29 371 aaKnown RBP4.58□□□□□ -1.68
SCFD1-204ENST00000463622 POLLQ9UGP5 575 aa4.58□□□□□ -1.68
SCFD1-204ENST00000463622 TSPYL4Q9UJ04 414 aa4.58□□□□□ -1.68
SCFD1-204ENST00000463622 TIMM13Q9Y5L4 95 aaPredicted RBP4.58□□□□□ -1.68
SCFD1-204ENST00000463622 ASTN2O75129 1339 aaPredicted RBP4.58□□□□□ -1.68
SCFD1-204ENST00000463622 IL16Q14005 1332 aa4.58□□□□□ -1.68
SCFD1-204ENST00000463622 TRPM7Q96QT4 1865 aa4.58□□□□□ -1.68
SCFD1-204ENST00000463622 HTTP42858 3142 aa4.57□□□□□ -1.68
SCFD1-204ENST00000463622 BCORQ6W2J9 1755 aa4.57□□□□□ -1.68
SCFD1-204ENST00000463622 UBE2Q2LH0YL09 131 aa4.57□□□□□ -1.68
SCFD1-204ENST00000463622 PRICKLE3O43900 615 aaPredicted RBP4.57□□□□□ -1.68
SCFD1-204ENST00000463622 BCAR3O75815 825 aa4.57□□□□□ -1.68
SCFD1-204ENST00000463622 CACNB2Q08289 660 aaPredicted RBP4.57□□□□□ -1.68
SCFD1-204ENST00000463622 LMOD3Q0VAK6 560 aa4.57□□□□□ -1.68
SCFD1-204ENST00000463622 SLC9A5Q14940 896 aa4.57□□□□□ -1.68
SCFD1-204ENST00000463622 PROSER3Q2NL68 480 aa4.57□□□□□ -1.68
SCFD1-204ENST00000463622 NT5DC1Q5TFE4 455 aa4.57□□□□□ -1.68
SCFD1-204ENST00000463622 LIPIQ6XZB0 460 aa4.57□□□□□ -1.68
SCFD1-204ENST00000463622 NLRP10Q86W26 655 aa4.57□□□□□ -1.68
SCFD1-204ENST00000463622 TMEM145Q8NBT3 493 aa4.57□□□□□ -1.68
SCFD1-204ENST00000463622 RCBTB1Q8NDN9 531 aa4.57□□□□□ -1.68
SCFD1-204ENST00000463622 DIO2Q92813 273 aa4.57□□□□□ -1.68
SCFD1-204ENST00000463622 CHAMP1Q96JM3 812 aa4.57□□□□□ -1.68
SCFD1-204ENST00000463622 SPATA6Q9NWH7 488 aaPredicted RBP4.57□□□□□ -1.68
SCFD1-204ENST00000463622 GGA3Q9NZ52 723 aa4.57□□□□□ -1.68
SCFD1-204ENST00000463622 RTEL1Q9NZ71 1219 aa4.57□□□□□ -1.68
SCFD1-204ENST00000463622 PCDHA2Q9Y5H9 948 aa4.57□□□□□ -1.68
SCFD1-204ENST00000463622 RTL9Q8NET4 1388 aa4.57□□□□□ -1.68
SCFD1-204ENST00000463622 MEFVO15553 781 aaPredicted RBP4.56□□□□□ -1.68
SCFD1-204ENST00000463622 C8BP07358 591 aa4.56□□□□□ -1.68
SCFD1-204ENST00000463622 EN2P19622 333 aaPredicted RBP4.56□□□□□ -1.68
SCFD1-204ENST00000463622 HOXC12P31275 282 aa4.56□□□□□ -1.68
SCFD1-204ENST00000463622 RPL11P62913 178 aaKnown RBP4.56□□□□□ -1.68
SCFD1-204ENST00000463622 GNAI1P63096 354 aa4.56□□□□□ -1.68
SCFD1-204ENST00000463622 SF3B3Q15393 1217 aaKnown RBP4.56□□□□□ -1.68
SCFD1-204ENST00000463622 CD300LDQ6UXZ3 194 aa4.56□□□□□ -1.68
SCFD1-204ENST00000463622 KIF6Q6ZMV9 814 aa4.56□□□□□ -1.68
SCFD1-204ENST00000463622 MOB2Q70IA6 237 aa4.56□□□□□ -1.68
SCFD1-204ENST00000463622 DDX46Q7L014 1031 aaKnown RBP4.56□□□□□ -1.68
SCFD1-204ENST00000463622 G2E3Q7L622 706 aa4.56□□□□□ -1.68
SCFD1-204ENST00000463622 OTOP1Q7RTM1 612 aa4.56□□□□□ -1.68
SCFD1-204ENST00000463622 MILR1Q7Z6M3 343 aa4.56□□□□□ -1.68
SCFD1-204ENST00000463622 FERMT3Q86UX7 667 aa4.56□□□□□ -1.68
SCFD1-204ENST00000463622 PPIL6Q8IXY8 311 aa4.56□□□□□ -1.68
SCFD1-204ENST00000463622 AGBL3Q8NEM8 1001 aa4.56□□□□□ -1.68
SCFD1-204ENST00000463622 DDX1Q92499 740 aaKnown RBP4.56□□□□□ -1.68
SCFD1-204ENST00000463622 TRMT2BQ96GJ1 504 aaKnown RBP4.56□□□□□ -1.68
SCFD1-204ENST00000463622 DBNDD1Q9H9R9 158 aa4.56□□□□□ -1.68
SCFD1-204ENST00000463622 PALD1Q9ULE6 856 aa4.56□□□□□ -1.68
SCFD1-204ENST00000463622 PLIN1O60240 522 aa4.56□□□□□ -1.68
SCFD1-204ENST00000463622 ECE2O60344 883 aa4.56□□□□□ -1.68
SCFD1-204ENST00000463622 SYN1P17600 705 aa4.56□□□□□ -1.68
SCFD1-204ENST00000463622 STAT5AP42229 794 aa4.56□□□□□ -1.68
SCFD1-204ENST00000463622 GFRA1P56159 465 aa4.56□□□□□ -1.68
SCFD1-204ENST00000463622 INHBEP58166 350 aa4.56□□□□□ -1.68
SCFD1-204ENST00000463622 IRX6P78412 446 aaPredicted RBP4.56□□□□□ -1.68
SCFD1-204ENST00000463622 SLC10A6Q3KNW5 377 aa4.56□□□□□ -1.68
SCFD1-204ENST00000463622 C20orf194Q5TEA3 1177 aa4.56□□□□□ -1.68
SCFD1-204ENST00000463622 ANKS3Q6ZW76 656 aa4.56□□□□□ -1.68
SCFD1-204ENST00000463622 DCP2Q8IU60 420 aaKnown RBP4.56□□□□□ -1.68
SCFD1-204ENST00000463622 TBC1D16Q8TBP0 767 aa4.56□□□□□ -1.68
SCFD1-204ENST00000463622 SSH1Q8WYL5 1049 aa4.56□□□□□ -1.68
SCFD1-204ENST00000463622 GORASP1Q9BQQ3 440 aa4.56□□□□□ -1.68
SCFD1-204ENST00000463622 AP5M1Q9H0R1 490 aa4.56□□□□□ -1.68
SCFD1-204ENST00000463622 PTPN22Q9Y2R2 807 aa4.56□□□□□ -1.68
SCFD1-204ENST00000463622 ZNF609O15014 1411 aa4.55□□□□□ -1.68
SCFD1-204ENST00000463622 H0YGN5 161 aa4.55□□□□□ -1.68
SCFD1-204ENST00000463622 MYL6BP14649 208 aa4.55□□□□□ -1.68
SCFD1-204ENST00000463622 RARSP54136 660 aaKnown RBP4.55□□□□□ -1.68
SCFD1-204ENST00000463622 PPP2R2AP63151 447 aa4.55□□□□□ -1.68
SCFD1-204ENST00000463622 GPSM2P81274 684 aa4.55□□□□□ -1.68
SCFD1-204ENST00000463622 SREBF2Q12772 1141 aa4.55□□□□□ -1.68
SCFD1-204ENST00000463622 TCIRG1Q13488 830 aa4.55□□□□□ -1.68
SCFD1-204ENST00000463622 SKOR2Q2VWA4 1001 aaPredicted RBP4.55□□□□□ -1.68
SCFD1-204ENST00000463622 TWISTNBQ3B726 338 aaPredicted RBP4.55□□□□□ -1.68
SCFD1-204ENST00000463622 CARFQ8N187 725 aa4.55□□□□□ -1.68
SCFD1-204ENST00000463622 SLC17A8Q8NDX2 589 aa4.55□□□□□ -1.68
SCFD1-204ENST00000463622 CPA5Q8WXQ8 436 aa4.55□□□□□ -1.68
SCFD1-204ENST00000463622 TMEM169Q96HH4 297 aa4.55□□□□□ -1.68
SCFD1-204ENST00000463622 PRO3102Q9H379 93 aa4.55□□□□□ -1.68
SCFD1-204ENST00000463622 PODXL2Q9NZ53 605 aa4.55□□□□□ -1.68
SCFD1-204ENST00000463622 R3HCC1Q9Y3T6 440 aaKnown RBP4.55□□□□□ -1.68
SCFD1-204ENST00000463622 TRIM17Q9Y577 477 aa4.55□□□□□ -1.68
SCFD1-204ENST00000463622 DUSP10Q9Y6W6 482 aa4.55□□□□□ -1.68
SCFD1-204ENST00000463622 SH3TC1Q8TE82 1336 aa4.54□□□□□ -1.68
SCFD1-204ENST00000463622 SH3D21A4FU49 640 aa4.54□□□□□ -1.68
SCFD1-204ENST00000463622 SCG5P05408 212 aa4.54□□□□□ -1.68
SCFD1-204ENST00000463622 CYP2C8P10632 490 aa4.54□□□□□ -1.68
SCFD1-204ENST00000463622 EIF2S2P20042 333 aaKnown RBP4.54□□□□□ -1.68
SCFD1-204ENST00000463622 RPS8P62241 208 aaKnown RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms