RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 CCDC149Q6ZUS6 474 aa12.57□□□□□ -0.4
SSR3-202ENST00000463503 GPR149Q86SP6 731 aa12.57□□□□□ -0.4
SSR3-202ENST00000463503 SUMF1Q8NBK3 374 aa12.57□□□□□ -0.4
SSR3-202ENST00000463503 CCDC12Q8WUD4 166 aaPredicted RBP12.57□□□□□ -0.4
SSR3-202ENST00000463503 AUTS2Q8WXX7 1259 aa12.57□□□□□ -0.4
SSR3-202ENST00000463503 CUL5Q93034 780 aa12.57□□□□□ -0.4
SSR3-202ENST00000463503 PPP1R16BQ96T49 567 aa12.57□□□□□ -0.4
SSR3-202ENST00000463503 GLT8D2Q9H1C3 349 aa12.57□□□□□ -0.4
SSR3-202ENST00000463503 KCNH7Q9NS40 1196 aa12.57□□□□□ -0.4
SSR3-202ENST00000463503 FBXL21Q9UKT6 434 aa12.57□□□□□ -0.4
SSR3-202ENST00000463503 RALGAPA1Q6GYQ0 2036 aa12.57□□□□□ -0.4
SSR3-202ENST00000463503 NFASCO94856 1347 aa12.57□□□□□ -0.4
SSR3-202ENST00000463503 ATG7O95352 703 aa12.56□□□□□ -0.4
SSR3-202ENST00000463503 C22orf31O95567 290 aa12.56□□□□□ -0.4
SSR3-202ENST00000463503 SP9P0CG40 484 aa12.56□□□□□ -0.4
SSR3-202ENST00000463503 XBP1P17861 261 aa12.56□□□□□ -0.4
SSR3-202ENST00000463503 CRYBB1P53674 252 aaPredicted RBP12.56□□□□□ -0.4
SSR3-202ENST00000463503 UBE2SQ16763 222 aa12.56□□□□□ -0.4
SSR3-202ENST00000463503 ODR4Q5SWX8 454 aa12.56□□□□□ -0.4
SSR3-202ENST00000463503 WWC2Q6AWC2 1192 aa12.56□□□□□ -0.4
SSR3-202ENST00000463503 GALNT17Q6IS24 598 aa12.56□□□□□ -0.4
SSR3-202ENST00000463503 OTOP3Q7RTS5 596 aa12.56□□□□□ -0.4
SSR3-202ENST00000463503 ZNF598Q86UK7 904 aaKnown RBP12.56□□□□□ -0.4
SSR3-202ENST00000463503 ECHDC2Q86YB7 292 aa12.56□□□□□ -0.4
SSR3-202ENST00000463503 CCDC148Q8NFR7 591 aa12.56□□□□□ -0.4
SSR3-202ENST00000463503 BCL7CQ8WUZ0 217 aaPredicted RBP12.56□□□□□ -0.4
SSR3-202ENST00000463503 TNPO1Q92973 898 aaKnown RBP12.56□□□□□ -0.4
SSR3-202ENST00000463503 ACSF2Q96CM8 615 aaPredicted RBP12.56□□□□□ -0.4
SSR3-202ENST00000463503 HINFPQ9BQA5 517 aa12.56□□□□□ -0.4
SSR3-202ENST00000463503 VN1R3Q9BXE9 311 aa12.56□□□□□ -0.4
SSR3-202ENST00000463503 ZMYND12Q9H0C1 365 aa12.56□□□□□ -0.4
SSR3-202ENST00000463503 SFXN1Q9H9B4 322 aa12.56□□□□□ -0.4
SSR3-202ENST00000463503 WNT16Q9UBV4 365 aa12.56□□□□□ -0.4
SSR3-202ENST00000463503 SMC3Q9UQE7 1217 aa12.56□□□□□ -0.4
SSR3-202ENST00000463503 NT5C1B-RDH14C9J2C7 533 aa12.55□□□□□ -0.4
SSR3-202ENST00000463503 MAFGO15525 162 aa12.55□□□□□ -0.4
SSR3-202ENST00000463503 CCNE2O96020 404 aa12.55□□□□□ -0.4
SSR3-202ENST00000463503 VTNP04004 478 aa12.55□□□□□ -0.4
SSR3-202ENST00000463503 CFHP08603 1231 aa12.55□□□□□ -0.4
SSR3-202ENST00000463503 CTSAP10619 480 aa12.55□□□□□ -0.4
SSR3-202ENST00000463503 GJB2P29033 226 aa12.55□□□□□ -0.4
SSR3-202ENST00000463503 SLC26A2P50443 739 aa12.55□□□□□ -0.4
SSR3-202ENST00000463503 BCAR1P56945 870 aa12.55□□□□□ -0.4
SSR3-202ENST00000463503 ZC3H14Q6PJT7 736 aaKnown RBP12.55□□□□□ -0.4
SSR3-202ENST00000463503 CABP7Q86V35 215 aa12.55□□□□□ -0.4
SSR3-202ENST00000463503 CCDC60Q8IWA6 550 aaPredicted RBP12.55□□□□□ -0.4
SSR3-202ENST00000463503 MAML2Q8IZL2 1156 aaPredicted RBP12.55□□□□□ -0.4
SSR3-202ENST00000463503 VPS52Q8N1B4 723 aa12.55□□□□□ -0.4
SSR3-202ENST00000463503 DAGLBQ8NCG7 672 aa12.55□□□□□ -0.4
SSR3-202ENST00000463503 TBC1D17Q9HA65 648 aa12.55□□□□□ -0.4
SSR3-202ENST00000463503 IGSF9Q9P2J2 1179 aa12.55□□□□□ -0.4
SSR3-202ENST00000463503 LAMA1P25391 3075 aa12.54□□□□□ -0.4
SSR3-202ENST00000463503 CNOT1A5YKK6 2376 aaKnown RBP12.54□□□□□ -0.4
SSR3-202ENST00000463503 hCG_1642624A0A1W2PR95 340 aa12.54□□□□□ -0.4
SSR3-202ENST00000463503 POTEMA6NI47 508 aa12.54□□□□□ -0.4
SSR3-202ENST00000463503 HBP1O60381 514 aa12.54□□□□□ -0.4
SSR3-202ENST00000463503 CXCL14O95715 111 aa12.54□□□□□ -0.4
SSR3-202ENST00000463503 DCNP07585 359 aaKnown RBP12.54□□□□□ -0.4
SSR3-202ENST00000463503 GLULP15104 373 aa12.54□□□□□ -0.4
SSR3-202ENST00000463503 PDCP20941 246 aa12.54□□□□□ -0.4
SSR3-202ENST00000463503 GNA11P29992 359 aa12.54□□□□□ -0.4
SSR3-202ENST00000463503 CA8P35219 290 aa12.54□□□□□ -0.4
SSR3-202ENST00000463503 TBC1D8BQ0IIM8 1120 aa12.54□□□□□ -0.4
SSR3-202ENST00000463503 LETM2Q2VYF4 491 aa12.54□□□□□ -0.4
SSR3-202ENST00000463503 TYW1BQ6NUM6 668 aa12.54□□□□□ -0.4
SSR3-202ENST00000463503 POTEGQ6S5H5 508 aa12.54□□□□□ -0.4
SSR3-202ENST00000463503 ABI1Q8IZP0 508 aa12.54□□□□□ -0.4
SSR3-202ENST00000463503 FAM184AQ8NB25 1140 aa12.54□□□□□ -0.4
SSR3-202ENST00000463503 HELQQ8TDG4 1101 aa12.54□□□□□ -0.4
SSR3-202ENST00000463503 RSAD2Q8WXG1 361 aa12.54□□□□□ -0.4
SSR3-202ENST00000463503 TMEM169Q96HH4 297 aa12.54□□□□□ -0.4
SSR3-202ENST00000463503 PHF20Q9BVI0 1012 aa12.54□□□□□ -0.4
SSR3-202ENST00000463503 CA14Q9ULX7 337 aa12.54□□□□□ -0.4
SSR3-202ENST00000463503 TCHHQ07283 1943 aa12.54□□□□□ -0.4
SSR3-202ENST00000463503 ANKRD11Q6UB99 2663 aaPredicted RBP12.54□□□□□ -0.4
SSR3-202ENST00000463503 ZFYVE26Q68DK2 2539 aa12.53□□□□□ -0.4
SSR3-202ENST00000463503 ATP4AP20648 1035 aa12.53□□□□□ -0.4
SSR3-202ENST00000463503 CLK2P49760 499 aaKnown RBP12.53□□□□□ -0.4
SSR3-202ENST00000463503 CLCN4P51793 760 aa12.53□□□□□ -0.4
SSR3-202ENST00000463503 POLGP54098 1239 aaPredicted RBP12.53□□□□□ -0.4
SSR3-202ENST00000463503 NAPAP54920 295 aa12.53□□□□□ -0.4
SSR3-202ENST00000463503 PTPN14Q15678 1187 aa12.53□□□□□ -0.4
SSR3-202ENST00000463503 NPY5RQ15761 445 aa12.53□□□□□ -0.4
SSR3-202ENST00000463503 ABHD15Q6UXT9 468 aa12.53□□□□□ -0.4
SSR3-202ENST00000463503 C15orf39Q6ZRI6 1047 aa12.53□□□□□ -0.4
SSR3-202ENST00000463503 HEATR3Q7Z4Q2 680 aa12.53□□□□□ -0.4
SSR3-202ENST00000463503 C1orf210Q8IVY1 113 aa12.53□□□□□ -0.4
SSR3-202ENST00000463503 LINC01465Q8N7H1 131 aa12.53□□□□□ -0.4
SSR3-202ENST00000463503 FBXO18Q8NFZ0 1043 aa12.53□□□□□ -0.4
SSR3-202ENST00000463503 BICD2Q8TD16 824 aa12.53□□□□□ -0.4
SSR3-202ENST00000463503 MXRA8Q9BRK3 442 aa12.53□□□□□ -0.4
SSR3-202ENST00000463503 SDF4Q9BRK5 362 aa12.53□□□□□ -0.4
SSR3-202ENST00000463503 PSTPIP2Q9H939 334 aa12.53□□□□□ -0.4
SSR3-202ENST00000463503 AGO4Q9HCK5 861 aaKnown RBP12.53□□□□□ -0.4
SSR3-202ENST00000463503 RIC8AQ9NPQ8 531 aa12.53□□□□□ -0.4
SSR3-202ENST00000463503 PCDHA6Q9UN73 950 aa12.53□□□□□ -0.4
SSR3-202ENST00000463503 PCDHA8Q9Y5H6 950 aa12.53□□□□□ -0.4
SSR3-202ENST00000463503 NOTCH4Q99466 2003 aa12.53□□□□□ -0.4
SSR3-202ENST00000463503 COL4A2P08572 1712 aa12.53□□□□□ -0.4
SSR3-202ENST00000463503 A0A0U1RQF3 1178 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms