RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 PORCNQ9H237 461 aa13.97□□□□□ -0.17
VAPB-203ENST00000463370 ATP6V0A4Q9HBG4 840 aa13.97□□□□□ -0.17
VAPB-203ENST00000463370 FBXL5Q9UKA1 691 aa13.97□□□□□ -0.17
VAPB-203ENST00000463370 EMSYQ7Z589 1322 aa13.97□□□□□ -0.17
VAPB-203ENST00000463370 IGKV6D-21A0A0A0MT36 114 aa13.96□□□□□ -0.17
VAPB-203ENST00000463370 TULP1O00294 542 aaPredicted RBP13.96□□□□□ -0.17
VAPB-203ENST00000463370 RRP9O43818 475 aaKnown RBP13.96□□□□□ -0.17
VAPB-203ENST00000463370 OATP04181 439 aa13.96□□□□□ -0.17
VAPB-203ENST00000463370 MYH11P35749 1972 aa13.96□□□□□ -0.17
VAPB-203ENST00000463370 VAMP7P51809 220 aa13.96□□□□□ -0.17
VAPB-203ENST00000463370 EMC2Q15006 297 aa13.96□□□□□ -0.17
VAPB-203ENST00000463370 PHLDB3Q6NSJ2 640 aa13.96□□□□□ -0.17
VAPB-203ENST00000463370 SRGAP1Q7Z6B7 1085 aa13.96□□□□□ -0.17
VAPB-203ENST00000463370 LOXHD1Q8IVV2 1947 aa13.96□□□□□ -0.17
VAPB-203ENST00000463370 SPIRE2Q8WWL2 714 aa13.96□□□□□ -0.17
VAPB-203ENST00000463370 CEP89Q96ST8 783 aa13.96□□□□□ -0.17
VAPB-203ENST00000463370 TSGA10Q9BZW7 698 aa13.96□□□□□ -0.17
VAPB-203ENST00000463370 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.96□□□□□ -0.172e-7■■■■■ 150.2
VAPB-203ENST00000463370 PJA2O43164 708 aa13.96□□□□□ -0.18
VAPB-203ENST00000463370 BUB1O43683 1085 aa13.96□□□□□ -0.18
VAPB-203ENST00000463370 DKC1O60832 514 aaKnown RBP eCLIP13.96□□□□□ -0.18
VAPB-203ENST00000463370 GFPT2O94808 682 aa13.96□□□□□ -0.18
VAPB-203ENST00000463370 GGPS1O95749 300 aa13.96□□□□□ -0.18
VAPB-203ENST00000463370 SLC25A27O95847 323 aa13.96□□□□□ -0.18
VAPB-203ENST00000463370 H2AFXP16104 143 aaPredicted RBP13.96□□□□□ -0.18
VAPB-203ENST00000463370 CHMP4BP1P59074 171 aa13.96□□□□□ -0.18
VAPB-203ENST00000463370 INTS8Q75QN2 995 aaKnown RBP13.96□□□□□ -0.18
VAPB-203ENST00000463370 FASTKD5Q7L8L6 764 aaKnown RBP13.96□□□□□ -0.18
VAPB-203ENST00000463370 EHBP1Q8NDI1 1231 aa13.96□□□□□ -0.18
VAPB-203ENST00000463370 MCPH1Q8NEM0 835 aa13.96□□□□□ -0.18
VAPB-203ENST00000463370 OLIG1Q8TAK6 271 aa13.96□□□□□ -0.18
VAPB-203ENST00000463370 FAM84AQ96KN4 292 aa13.96□□□□□ -0.18
VAPB-203ENST00000463370 PDCL3Q9H2J4 239 aa13.96□□□□□ -0.18
VAPB-203ENST00000463370 EFCC1Q9HA90 598 aa13.96□□□□□ -0.18
VAPB-203ENST00000463370 CGNQ9P2M7 1197 aaKnown RBP13.96□□□□□ -0.18
VAPB-203ENST00000463370 DNAJC12Q9UKB3 198 aa13.96□□□□□ -0.18
VAPB-203ENST00000463370 CLEC11AQ9Y240 323 aa13.96□□□□□ -0.18
VAPB-203ENST00000463370 DNAJC25-GNG10A0A024R161 153 aa13.95□□□□□ -0.18
VAPB-203ENST00000463370 F8VZ95 297 aa13.95□□□□□ -0.18
VAPB-203ENST00000463370 ZNF185O15231 689 aa13.95□□□□□ -0.18
VAPB-203ENST00000463370 KRT13P13646 458 aa13.95□□□□□ -0.18
VAPB-203ENST00000463370 POLGP54098 1239 aaPredicted RBP13.95□□□□□ -0.18
VAPB-203ENST00000463370 PAPD7Q5XG87 772 aaKnown RBP13.95□□□□□ -0.18
VAPB-203ENST00000463370 FBXO16Q8IX29 292 aaPredicted RBP13.95□□□□□ -0.18
VAPB-203ENST00000463370 ASAP3Q8TDY4 903 aa13.95□□□□□ -0.18
VAPB-203ENST00000463370 SLC10A4Q96EP9 437 aa13.95□□□□□ -0.18
VAPB-203ENST00000463370 POP1Q99575 1024 aaKnown RBP13.95□□□□□ -0.18
VAPB-203ENST00000463370 FAM170AA1A519 330 aa13.95□□□□□ -0.18
VAPB-203ENST00000463370 OSBPP22059 807 aa13.95□□□□□ -0.18
VAPB-203ENST00000463370 TCF7P36402 384 aaPredicted RBP13.95□□□□□ -0.18
VAPB-203ENST00000463370 ERVK-9P63128 1117 aa13.95□□□□□ -0.18
VAPB-203ENST00000463370 SNAPC2Q13487 334 aa13.95□□□□□ -0.18
VAPB-203ENST00000463370 SNRNP35Q16560 246 aaKnown RBP13.95□□□□□ -0.18
VAPB-203ENST00000463370 HSDL1Q3SXM5 330 aa13.95□□□□□ -0.18
VAPB-203ENST00000463370 TRIM50Q86XT4 487 aa13.95□□□□□ -0.18
VAPB-203ENST00000463370 MMP19Q99542 508 aa13.95□□□□□ -0.18
VAPB-203ENST00000463370 DHX33Q9H6R0 707 aaKnown RBP13.95□□□□□ -0.18
VAPB-203ENST00000463370 ARHGAP28Q9P2N2 729 aa13.95□□□□□ -0.18
VAPB-203ENST00000463370 APEX2Q9UBZ4 518 aa13.95□□□□□ -0.18
VAPB-203ENST00000463370 EVI5O60447 810 aa13.94□□□□□ -0.18
VAPB-203ENST00000463370 KLRC1P26715 233 aa13.94□□□□□ -0.18
VAPB-203ENST00000463370 PRKCIP41743 596 aa13.94□□□□□ -0.18
VAPB-203ENST00000463370 DRP2Q13474 957 aa13.94□□□□□ -0.18
VAPB-203ENST00000463370 DRAP1Q14919 205 aaPredicted RBP13.94□□□□□ -0.18
VAPB-203ENST00000463370 MTERF4Q7Z6M4 381 aaKnown RBP13.94□□□□□ -0.18
VAPB-203ENST00000463370 SLC17A8Q8NDX2 589 aa13.94□□□□□ -0.18
VAPB-203ENST00000463370 COPS5Q92905 334 aa13.94□□□□□ -0.18
VAPB-203ENST00000463370 ELMO3Q96BJ8 720 aa13.94□□□□□ -0.18
VAPB-203ENST00000463370 CCDC127Q96BQ5 260 aa13.94□□□□□ -0.18
VAPB-203ENST00000463370 CAPZA3Q96KX2 299 aa13.94□□□□□ -0.18
VAPB-203ENST00000463370 C17orf75Q9HAS0 396 aa13.94□□□□□ -0.18
VAPB-203ENST00000463370 TOPORSQ9NS56 1045 aaPredicted RBP13.94□□□□□ -0.18
VAPB-203ENST00000463370 ZNF446Q9NWS9 450 aa13.94□□□□□ -0.18
VAPB-203ENST00000463370 DDX41Q9UJV9 622 aaKnown RBP13.94□□□□□ -0.18
VAPB-203ENST00000463370 SAR1BQ9Y6B6 198 aa13.94□□□□□ -0.18
VAPB-203ENST00000463370 IQCA1LA6NCM1 817 aa13.94□□□□□ -0.18
VAPB-203ENST00000463370 NCK2O43639 380 aa13.94□□□□□ -0.18
VAPB-203ENST00000463370 GLRA2P23416 452 aa13.94□□□□□ -0.18
VAPB-203ENST00000463370 RTP1P59025 263 aa13.94□□□□□ -0.18
VAPB-203ENST00000463370 KCTD2Q14681 263 aa13.94□□□□□ -0.18
VAPB-203ENST00000463370 ARHGAP44Q17R89 818 aa13.94□□□□□ -0.18
VAPB-203ENST00000463370 WHAMMP3Q1A5X7 153 aa13.94□□□□□ -0.18
VAPB-203ENST00000463370 METTL7BQ6UX53 244 aa13.94□□□□□ -0.18
VAPB-203ENST00000463370 ARHGEF19Q8IW93 802 aa13.94□□□□□ -0.18
VAPB-203ENST00000463370 NOA1Q8NC60 698 aaKnown RBP13.94□□□□□ -0.18
VAPB-203ENST00000463370 GOLGA1Q92805 767 aa13.94□□□□□ -0.18
VAPB-203ENST00000463370 MAP7D2Q96T17 732 aa13.94□□□□□ -0.18
VAPB-203ENST00000463370 TMEM117Q9H0C3 514 aa13.94□□□□□ -0.18
VAPB-203ENST00000463370 PDGFCQ9NRA1 345 aa13.94□□□□□ -0.18
VAPB-203ENST00000463370 HNRNPDLO14979 420 aaKnown RBP13.93□□□□□ -0.18
VAPB-203ENST00000463370 EDN1P05305 212 aa13.93□□□□□ -0.18
VAPB-203ENST00000463370 MARK3P27448 753 aa13.93□□□□□ -0.18
VAPB-203ENST00000463370 CLCN6P51797 869 aa13.93□□□□□ -0.18
VAPB-203ENST00000463370 NEDD9Q14511 834 aa13.93□□□□□ -0.18
VAPB-203ENST00000463370 KIAA0753Q2KHM9 967 aa13.93□□□□□ -0.18
VAPB-203ENST00000463370 EPC2Q52LR7 807 aa13.93□□□□□ -0.18
VAPB-203ENST00000463370 CEP112Q8N8E3 955 aa13.93□□□□□ -0.18
VAPB-203ENST00000463370 TRIM58Q8NG06 486 aa13.93□□□□□ -0.18
VAPB-203ENST00000463370 KAT5Q92993 513 aa13.93□□□□□ -0.18
VAPB-203ENST00000463370 MS4A4AQ96JQ5 239 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms