RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 OPLAHO14841 1288 aa12.45□□□□□ -0.42
TRAPPC3-205ENST00000462715 STRNO43815 780 aa12.45□□□□□ -0.42
TRAPPC3-205ENST00000462715 SMIM24O75264 130 aa12.45□□□□□ -0.42
TRAPPC3-205ENST00000462715 ALAS1P13196 640 aa12.45□□□□□ -0.42
TRAPPC3-205ENST00000462715 KIF5AQ12840 1032 aa12.45□□□□□ -0.42
TRAPPC3-205ENST00000462715 MTMR3Q13615 1198 aa12.45□□□□□ -0.42
TRAPPC3-205ENST00000462715 KRT31Q15323 416 aa12.45□□□□□ -0.42
TRAPPC3-205ENST00000462715 GPR142Q7Z601 462 aa12.45□□□□□ -0.42
TRAPPC3-205ENST00000462715 SH3RF1Q7Z6J0 888 aa12.45□□□□□ -0.42
TRAPPC3-205ENST00000462715 LZICQ8WZA0 190 aa12.45□□□□□ -0.42
TRAPPC3-205ENST00000462715 EPAS1Q99814 870 aa12.45□□□□□ -0.42
TRAPPC3-205ENST00000462715 ACAD9Q9H845 621 aa12.45□□□□□ -0.42
TRAPPC3-205ENST00000462715 RWDD2AQ9UIY3 292 aa12.45□□□□□ -0.42
TRAPPC3-205ENST00000462715 ABCB11O95342 1321 aa12.45□□□□□ -0.42
TRAPPC3-205ENST00000462715 CNTNAP5Q8WYK1 1306 aa12.45□□□□□ -0.42
TRAPPC3-205ENST00000462715 ZSCAN9O15535 394 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC3-205ENST00000462715 PRMT2P55345 433 aa12.45□□□□□ -0.42
TRAPPC3-205ENST00000462715 SLC35G1Q2M3R5 365 aa12.45□□□□□ -0.42
TRAPPC3-205ENST00000462715 AGAP11Q8TF27 550 aa12.45□□□□□ -0.42
TRAPPC3-205ENST00000462715 SOCS4Q8WXH5 440 aa12.45□□□□□ -0.42
TRAPPC3-205ENST00000462715 ARHGAP39Q9C0H5 1083 aa12.45□□□□□ -0.42
TRAPPC3-205ENST00000462715 HOMER2Q9NSB8 354 aa12.45□□□□□ -0.42
TRAPPC3-205ENST00000462715 RNF146Q9NTX7 359 aa12.45□□□□□ -0.42
TRAPPC3-205ENST00000462715 WDR35Q9P2L0 1181 aa12.45□□□□□ -0.42
TRAPPC3-205ENST00000462715 SERTAD1Q9UHV2 236 aa12.45□□□□□ -0.42
TRAPPC3-205ENST00000462715 LRRC42Q9Y546 428 aa12.45□□□□□ -0.42
TRAPPC3-205ENST00000462715 MGAMO43451 1857 aa12.44□□□□□ -0.42
TRAPPC3-205ENST00000462715 PENKP01210 267 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC3-205ENST00000462715 FCER1AP12319 257 aa12.44□□□□□ -0.42
TRAPPC3-205ENST00000462715 NQO1P15559 274 aaKnown RBP12.44□□□□□ -0.42
TRAPPC3-205ENST00000462715 IFNAR1P17181 557 aa12.44□□□□□ -0.42
TRAPPC3-205ENST00000462715 IBSPP21815 317 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC3-205ENST00000462715 KCTD2Q14681 263 aa12.44□□□□□ -0.42
TRAPPC3-205ENST00000462715 SPRED3Q2MJR0 410 aa12.44□□□□□ -0.42
TRAPPC3-205ENST00000462715 USH1GQ495M9 461 aa12.44□□□□□ -0.42
TRAPPC3-205ENST00000462715 HSP90AA4PQ58FG1 418 aa12.44□□□□□ -0.42
TRAPPC3-205ENST00000462715 CPLX4Q7Z7G2 160 aa12.44□□□□□ -0.42
TRAPPC3-205ENST00000462715 TRIM22Q8IYM9 498 aa12.44□□□□□ -0.42
TRAPPC3-205ENST00000462715 ABRAQ8N0Z2 381 aa12.44□□□□□ -0.42
TRAPPC3-205ENST00000462715 CHP1Q99653 195 aa12.44□□□□□ -0.42
TRAPPC3-205ENST00000462715 PYM1Q9BRP8 204 aaKnown RBP12.44□□□□□ -0.42
TRAPPC3-205ENST00000462715 MRPL11Q9Y3B7 192 aaKnown RBP12.44□□□□□ -0.42
TRAPPC3-205ENST00000462715 RIPK3Q9Y572 518 aa12.44□□□□□ -0.42
TRAPPC3-205ENST00000462715 SRPRBQ9Y5M8 271 aaKnown RBP12.44□□□□□ -0.42
TRAPPC3-205ENST00000462715 STK36Q9NRP7 1315 aa12.44□□□□□ -0.42
TRAPPC3-205ENST00000462715 SLC15A5A6NIM6 579 aa12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 PPP1R3GB7ZBB8 358 aa12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 FUT2Q10981 343 aa12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 CTU1Q7Z7A3 348 aaKnown RBP12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 PIGWQ7Z7B1 504 aa12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 RAPGEF5Q92565 580 aa12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 CHMP6Q96FZ7 201 aa12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 MMP19Q99542 508 aa12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 OSBPL1AQ9BXW6 950 aa12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 FBXO2Q9UK22 296 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 TRIM17Q9Y577 477 aa12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 PCDHA1Q9Y5I3 950 aa12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 CASP8AP2Q9UKL3 1982 aa12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 MYH6P13533 1939 aa12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 POLR2DO15514 142 aaKnown RBP12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 DIAPH2O60879 1101 aa12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 CTGFP29279 349 aa12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 ABCD1P33897 745 aa12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 CFAP221Q4G0U5 840 aa12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 KRT40Q6A162 431 aa12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 OTOP1Q7RTM1 612 aa12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 ANKRD35Q8N283 1001 aa12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 HDAC7Q8WUI4 952 aa12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 NAF1Q96HR8 494 aaKnown RBP12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 IFT74Q96LB3 600 aa12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 NUDT12Q9BQG2 462 aa12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 ALG1Q9BT22 464 aa12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 RNF26Q9BY78 433 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 MAF1Q9H063 256 aa12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 TRIM10Q9UDY6 481 aa12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 SRRDQ9UH36 339 aa12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 V9GY48 417 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 PFASO15067 1338 aa12.43□□□□□ -0.42
TRAPPC3-205ENST00000462715 hCG_1984214I3L0E3 225 aa12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 GSTA2P09210 222 aa12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 ATP2A2P16615 1042 aaKnown RBP12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 SSRP1Q08945 709 aaKnown RBP12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 CUL1Q13616 776 aa12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 TRIM29Q14134 588 aa12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 GRB14Q14449 540 aa12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 NTRK3Q16288 839 aa12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 QPCTQ16769 361 aa12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 RILPL1Q5EBL4 403 aa12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 TCP11X2Q5H9J9 407 aa12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 FIGNQ5HY92 759 aa12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 ZNF713Q8N859 430 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 TEKT4Q8WW24 435 aa12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 CCDC134Q9H6E4 229 aa12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 BAZ2BQ9UIF8 2168 aaKnown RBP12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 ZNF185O15231 689 aa12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 MAFGO15525 162 aa12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 PRPF3O43395 683 aaKnown RBP12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 RGS2P41220 211 aa12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 PKN2Q16513 984 aaKnown RBP12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 ANKRD20A2Q5SQ80 823 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms