RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 LRRIQ4A6NIV6 560 aa20.88■□□□□ 0.93
COL9A3-203ENST00000462700 TSPAN1O60635 241 aa20.88■□□□□ 0.93
COL9A3-203ENST00000462700 ERLIN2O94905 339 aa20.88■□□□□ 0.93
COL9A3-203ENST00000462700 SKIP12755 728 aa20.88■□□□□ 0.93
COL9A3-203ENST00000462700 HOXA11P31270 313 aaPredicted RBP20.88■□□□□ 0.93
COL9A3-203ENST00000462700 RAB27AP51159 221 aa20.88■□□□□ 0.93
COL9A3-203ENST00000462700 PTPAQ15257 358 aa20.88■□□□□ 0.93
COL9A3-203ENST00000462700 CABP7Q86V35 215 aa20.88■□□□□ 0.93
COL9A3-203ENST00000462700 KCTD17Q8N5Z5 321 aa20.88■□□□□ 0.93
COL9A3-203ENST00000462700 CASD1Q96PB1 797 aa20.88■□□□□ 0.93
COL9A3-203ENST00000462700 C11orf84Q9BUA3 381 aaPredicted RBP20.88■□□□□ 0.93
COL9A3-203ENST00000462700 NT5C3AQ9H0P0 336 aa20.88■□□□□ 0.93
COL9A3-203ENST00000462700 FAM105AQ9NUU6 356 aa20.88■□□□□ 0.93
COL9A3-203ENST00000462700 AXLP30530 894 aa20.87■□□□□ 0.93
COL9A3-203ENST00000462700 LONP1P36776 959 aaKnown RBP20.87■□□□□ 0.93
COL9A3-203ENST00000462700 GRIN1Q05586 938 aa20.87■□□□□ 0.93
COL9A3-203ENST00000462700 AMHR2Q16671 573 aa20.87■□□□□ 0.93
COL9A3-203ENST00000462700 CLLU1OSQ5K130 101 aa20.87■□□□□ 0.93
COL9A3-203ENST00000462700 CDCA2Q69YH5 1023 aaPredicted RBP20.87■□□□□ 0.93
COL9A3-203ENST00000462700 ABI1Q8IZP0 508 aa20.87■□□□□ 0.93
COL9A3-203ENST00000462700 SLC17A8Q8NDX2 589 aa20.87■□□□□ 0.93
COL9A3-203ENST00000462700 BSNDQ8WZ55 320 aa20.87■□□□□ 0.93
COL9A3-203ENST00000462700 CDK5RAP3Q96JB5 506 aa20.87■□□□□ 0.93
COL9A3-203ENST00000462700 PLVAPQ9BX97 442 aa20.87■□□□□ 0.93
COL9A3-203ENST00000462700 SLC26A4O43511 780 aa20.86■□□□□ 0.93
COL9A3-203ENST00000462700 ZNF623O75123 536 aa20.86■□□□□ 0.93
COL9A3-203ENST00000462700 TMEM119Q4V9L6 283 aa20.86■□□□□ 0.93
COL9A3-203ENST00000462700 UBXN11Q5T124 520 aa20.86■□□□□ 0.93
COL9A3-203ENST00000462700 KIFAP3Q92845 792 aa20.86■□□□□ 0.93
COL9A3-203ENST00000462700 P2RX5Q93086 422 aa20.86■□□□□ 0.93
COL9A3-203ENST00000462700 PLIN2Q99541 437 aa20.86■□□□□ 0.93
COL9A3-203ENST00000462700 TYW1Q9NV66 732 aaKnown RBP20.86■□□□□ 0.93
COL9A3-203ENST00000462700 HCSTQ9UBK5 93 aa20.86■□□□□ 0.93
COL9A3-203ENST00000462700 NLRC5Q86WI3 1866 aa20.86■□□□□ 0.93
COL9A3-203ENST00000462700 UBA7P41226 1012 aa20.85■□□□□ 0.93
COL9A3-203ENST00000462700 NAMPTP43490 491 aa20.85■□□□□ 0.93
COL9A3-203ENST00000462700 CEBPZQ03701 1054 aaKnown RBP20.85■□□□□ 0.93
COL9A3-203ENST00000462700 NCBP1Q09161 790 aaKnown RBP20.85■□□□□ 0.93
COL9A3-203ENST00000462700 PPP2R5AQ15172 486 aa20.85■□□□□ 0.93
COL9A3-203ENST00000462700 PTPROQ16827 1216 aa20.85■□□□□ 0.93
COL9A3-203ENST00000462700 SPOUT1Q5T280 376 aaKnown RBP20.85■□□□□ 0.93
COL9A3-203ENST00000462700 RINT1Q6NUQ1 792 aa20.85■□□□□ 0.93
COL9A3-203ENST00000462700 NOTUMQ6P988 496 aa20.85■□□□□ 0.93
COL9A3-203ENST00000462700 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.85■□□□□ 0.93
COL9A3-203ENST00000462700 ZBTB8OSQ8IWT0 167 aa20.85■□□□□ 0.93
COL9A3-203ENST00000462700 LRRC43Q8N309 656 aa20.85■□□□□ 0.93
COL9A3-203ENST00000462700 HELQQ8TDG4 1101 aa20.85■□□□□ 0.93
COL9A3-203ENST00000462700 LPPQ93052 612 aa20.85■□□□□ 0.93
COL9A3-203ENST00000462700 MRPL38Q96DV4 380 aaKnown RBP20.85■□□□□ 0.93
COL9A3-203ENST00000462700 CPB2Q96IY4 423 aa20.85■□□□□ 0.93
COL9A3-203ENST00000462700 USP28Q96RU2 1077 aa20.85■□□□□ 0.93
COL9A3-203ENST00000462700 RUSC1Q9BVN2 902 aa20.85■□□□□ 0.93
COL9A3-203ENST00000462700 C2orf40Q9H1Z8 148 aa20.85■□□□□ 0.93
COL9A3-203ENST00000462700 CWH43Q9H720 699 aa20.85■□□□□ 0.93
COL9A3-203ENST00000462700 POLD4Q9HCU8 107 aa20.85■□□□□ 0.93
COL9A3-203ENST00000462700 PCDHB2Q9Y5E7 798 aa20.85■□□□□ 0.93
COL9A3-203ENST00000462700 PRUNE2Q8WUY3 3088 aa20.85■□□□□ 0.93
COL9A3-203ENST00000462700 FNDC1Q4ZHG4 1894 aaPredicted RBP20.84■□□□□ 0.93
COL9A3-203ENST00000462700 PDIA4P13667 645 aaKnown RBP20.84■□□□□ 0.93
COL9A3-203ENST00000462700 MARCKSP29966 332 aaPredicted RBP20.84■□□□□ 0.93
COL9A3-203ENST00000462700 LONRF3Q496Y0 759 aa20.84■□□□□ 0.93
COL9A3-203ENST00000462700 NAALADL2Q58DX5 795 aa20.84■□□□□ 0.93
COL9A3-203ENST00000462700 PPP4R3CPQ6ZMV5 832 aa20.84■□□□□ 0.93
COL9A3-203ENST00000462700 LRRC55Q6ZSA7 311 aa20.84■□□□□ 0.93
COL9A3-203ENST00000462700 C1orf186Q6ZWK4 172 aa20.84■□□□□ 0.93
COL9A3-203ENST00000462700 SYT2Q8N9I0 419 aaPredicted RBP20.84■□□□□ 0.93
COL9A3-203ENST00000462700 SPRYD3Q8NCJ5 442 aa20.84■□□□□ 0.93
COL9A3-203ENST00000462700 PGBD4Q96DM1 585 aa20.84■□□□□ 0.93
COL9A3-203ENST00000462700 CCDC51Q96ER9 411 aa20.84■□□□□ 0.93
COL9A3-203ENST00000462700 CALML4Q96GE6 196 aa20.84■□□□□ 0.93
COL9A3-203ENST00000462700 IFT74Q96LB3 600 aa20.84■□□□□ 0.93
COL9A3-203ENST00000462700 PRDM6Q9NQX0 595 aa20.84■□□□□ 0.93
COL9A3-203ENST00000462700 PRMT7Q9NVM4 692 aaPredicted RBP20.84■□□□□ 0.93
COL9A3-203ENST00000462700 FBXO2Q9UK22 296 aaPredicted RBP20.84■□□□□ 0.93
COL9A3-203ENST00000462700 MEIS3P2A8K0S8 358 aa20.83■□□□□ 0.93
COL9A3-203ENST00000462700 GRM6O15303 877 aa20.83■□□□□ 0.93
COL9A3-203ENST00000462700 B4GALT5O43286 388 aa20.83■□□□□ 0.93
COL9A3-203ENST00000462700 HIP1RO75146 1068 aa20.83■□□□□ 0.93
COL9A3-203ENST00000462700 ARF4P18085 180 aaPredicted RBP20.83■□□□□ 0.93
COL9A3-203ENST00000462700 SLC12A3P55017 1021 aa20.83■□□□□ 0.93
COL9A3-203ENST00000462700 MRPL10Q7Z7H8 261 aaKnown RBP20.83■□□□□ 0.93
COL9A3-203ENST00000462700 DAW1Q8N136 415 aa20.83■□□□□ 0.93
COL9A3-203ENST00000462700 KLHL23Q8NBE8 558 aa20.83■□□□□ 0.93
COL9A3-203ENST00000462700 DEPTORQ8TB45 409 aa20.83■□□□□ 0.93
COL9A3-203ENST00000462700 RSPH1Q8WYR4 309 aa20.83■□□□□ 0.93
COL9A3-203ENST00000462700 PRIMPOLQ96LW4 560 aa20.83■□□□□ 0.93
COL9A3-203ENST00000462700 MRPL9Q9BYD2 267 aaKnown RBP20.83■□□□□ 0.93
COL9A3-203ENST00000462700 LMAN2LQ9H0V9 348 aa20.83■□□□□ 0.93
COL9A3-203ENST00000462700 CSRNP2Q9H175 543 aa20.83■□□□□ 0.93
COL9A3-203ENST00000462700 FZD8Q9H461 694 aa20.83■□□□□ 0.93
COL9A3-203ENST00000462700 AAASQ9NRG9 546 aa20.83■□□□□ 0.93
COL9A3-203ENST00000462700 PLAGL2Q9UPG8 496 aa20.83■□□□□ 0.93
COL9A3-203ENST00000462700 SRPRBQ9Y5M8 271 aaKnown RBP20.83■□□□□ 0.93
COL9A3-203ENST00000462700 MORC2Q9Y6X9 1032 aaPredicted RBP20.83■□□□□ 0.93
COL9A3-203ENST00000462700 KIAA1671Q9BY89 1806 aa20.83■□□□□ 0.92
COL9A3-203ENST00000462700 REV3LO60673 3130 aa20.82■□□□□ 0.92
COL9A3-203ENST00000462700 SSBP05455 408 aaKnown RBP eCLIP20.82■□□□□ 0.92
COL9A3-203ENST00000462700 ITGB1P05556 798 aa20.82■□□□□ 0.92
COL9A3-203ENST00000462700 PLA2G4BP0C869 781 aa20.82■□□□□ 0.92
COL9A3-203ENST00000462700 LAG3P18627 525 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms