RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 NCBP1Q09161 790 aaKnown RBP20.53■□□□□ 0.88
CDKN1A-206ENST00000462537 LONRF3Q496Y0 759 aa20.53■□□□□ 0.88
CDKN1A-206ENST00000462537 PLIN2Q99541 437 aa20.53■□□□□ 0.88
CDKN1A-206ENST00000462537 PLVAPQ9BX97 442 aa20.53■□□□□ 0.88
CDKN1A-206ENST00000462537 PRDM6Q9NQX0 595 aa20.53■□□□□ 0.88
CDKN1A-206ENST00000462537 TYW1Q9NV66 732 aaKnown RBP20.53■□□□□ 0.88
CDKN1A-206ENST00000462537 MTMR6Q9Y217 621 aa20.53■□□□□ 0.88
CDKN1A-206ENST00000462537 PRRC2BQ5JSZ5 2229 aaKnown RBP20.52■□□□□ 0.88
CDKN1A-206ENST00000462537 CSPG5O95196 566 aa20.52■□□□□ 0.88
CDKN1A-206ENST00000462537 ATF7P17544 494 aaPredicted RBP20.52■□□□□ 0.88
CDKN1A-206ENST00000462537 MBTD1Q05BQ5 628 aa20.52■□□□□ 0.88
CDKN1A-206ENST00000462537 PCBP1Q15365 356 aaKnown RBP eCLIP20.52■□□□□ 0.88
CDKN1A-206ENST00000462537 FAM173BQ6P4H8 233 aa20.52■□□□□ 0.88
CDKN1A-206ENST00000462537 ZNF598Q86UK7 904 aaKnown RBP20.52■□□□□ 0.88
CDKN1A-206ENST00000462537 HELQQ8TDG4 1101 aa20.52■□□□□ 0.88
CDKN1A-206ENST00000462537 LPPQ93052 612 aa20.52■□□□□ 0.88
CDKN1A-206ENST00000462537 MRPL38Q96DV4 380 aaKnown RBP20.52■□□□□ 0.88
CDKN1A-206ENST00000462537 AK8Q96MA6 479 aa20.52■□□□□ 0.88
CDKN1A-206ENST00000462537 CASD1Q96PB1 797 aa20.52■□□□□ 0.88
CDKN1A-206ENST00000462537 TRAIPQ9BWF2 469 aa20.52■□□□□ 0.88
CDKN1A-206ENST00000462537 NT5C3AQ9H0P0 336 aa20.52■□□□□ 0.88
CDKN1A-206ENST00000462537 POLD4Q9HCU8 107 aa20.52■□□□□ 0.88
CDKN1A-206ENST00000462537 AAASQ9NRG9 546 aa20.52■□□□□ 0.88
CDKN1A-206ENST00000462537 RNF19AQ9NV58 838 aa20.52■□□□□ 0.88
CDKN1A-206ENST00000462537 CLIC4Q9Y696 253 aa20.52■□□□□ 0.88
CDKN1A-206ENST00000462537 TSPAN1O60635 241 aa20.51■□□□□ 0.87
CDKN1A-206ENST00000462537 HOXA11P31270 313 aaPredicted RBP20.51■□□□□ 0.87
CDKN1A-206ENST00000462537 CEBPZQ03701 1054 aaKnown RBP20.51■□□□□ 0.87
CDKN1A-206ENST00000462537 CLLU1OSQ5K130 101 aa20.51■□□□□ 0.87
CDKN1A-206ENST00000462537 CABP7Q86V35 215 aa20.51■□□□□ 0.87
CDKN1A-206ENST00000462537 IFNLR1Q8IU57 520 aaPredicted RBP20.51■□□□□ 0.87
CDKN1A-206ENST00000462537 ZBTB8OSQ8IWT0 167 aa20.51■□□□□ 0.87
CDKN1A-206ENST00000462537 LRRC43Q8N309 656 aa20.51■□□□□ 0.87
CDKN1A-206ENST00000462537 SPRYD3Q8NCJ5 442 aa20.51■□□□□ 0.87
CDKN1A-206ENST00000462537 RASSF8Q8NHQ8 419 aa20.51■□□□□ 0.87
CDKN1A-206ENST00000462537 CPB2Q96IY4 423 aa20.51■□□□□ 0.87
CDKN1A-206ENST00000462537 IFT74Q96LB3 600 aa20.51■□□□□ 0.87
CDKN1A-206ENST00000462537 NFKBIZQ9BYH8 718 aa20.51■□□□□ 0.87
CDKN1A-206ENST00000462537 ZSCAN16Q9H4T2 348 aaPredicted RBP20.51■□□□□ 0.87
CDKN1A-206ENST00000462537 ALG13Q9NP73 1137 aaKnown RBP20.51■□□□□ 0.87
CDKN1A-206ENST00000462537 HCSTQ9UBK5 93 aa20.51■□□□□ 0.87
CDKN1A-206ENST00000462537 PCDHB2Q9Y5E7 798 aa20.51■□□□□ 0.87
CDKN1A-206ENST00000462537 PCDHB12Q9Y5F1 795 aa20.51■□□□□ 0.87
CDKN1A-206ENST00000462537 GRM6O15303 877 aa20.5■□□□□ 0.87
CDKN1A-206ENST00000462537 SSBP05455 408 aaKnown RBP eCLIP20.5■□□□□ 0.87
CDKN1A-206ENST00000462537 AXLP30530 894 aa20.5■□□□□ 0.87
CDKN1A-206ENST00000462537 LONP1P36776 959 aaKnown RBP20.5■□□□□ 0.87
CDKN1A-206ENST00000462537 UBA7P41226 1012 aa20.5■□□□□ 0.87
CDKN1A-206ENST00000462537 PPP2R5AQ15172 486 aa20.5■□□□□ 0.87
CDKN1A-206ENST00000462537 NAALADL2Q58DX5 795 aa20.5■□□□□ 0.87
CDKN1A-206ENST00000462537 NOTUMQ6P988 496 aa20.5■□□□□ 0.87
CDKN1A-206ENST00000462537 KCNK18Q7Z418 384 aa20.5■□□□□ 0.87
CDKN1A-206ENST00000462537 KLHL23Q8NBE8 558 aa20.5■□□□□ 0.87
CDKN1A-206ENST00000462537 BSNDQ8WZ55 320 aa20.5■□□□□ 0.87
CDKN1A-206ENST00000462537 KIFAP3Q92845 792 aa20.5■□□□□ 0.87
CDKN1A-206ENST00000462537 P2RX5Q93086 422 aa20.5■□□□□ 0.87
CDKN1A-206ENST00000462537 PGBD4Q96DM1 585 aa20.5■□□□□ 0.87
CDKN1A-206ENST00000462537 CALML4Q96GE6 196 aa20.5■□□□□ 0.87
CDKN1A-206ENST00000462537 PNMA5Q96PV4 448 aa20.5■□□□□ 0.87
CDKN1A-206ENST00000462537 C2orf40Q9H1Z8 148 aa20.5■□□□□ 0.87
CDKN1A-206ENST00000462537 THEGQ9P2T0 379 aa20.5■□□□□ 0.87
CDKN1A-206ENST00000462537 MYH15Q9Y2K3 1946 aa20.49■□□□□ 0.87
CDKN1A-206ENST00000462537 LAG3P18627 525 aa20.49■□□□□ 0.87
CDKN1A-206ENST00000462537 LIG1P18858 919 aa20.49■□□□□ 0.87
CDKN1A-206ENST00000462537 TMEM132AQ24JP5 1023 aa20.49■□□□□ 0.87
CDKN1A-206ENST00000462537 TIGD5Q53EQ6 642 aa20.49■□□□□ 0.87
CDKN1A-206ENST00000462537 HYIQ5T013 277 aa20.49■□□□□ 0.87
CDKN1A-206ENST00000462537 GLB1LQ6UWU2 654 aa20.49■□□□□ 0.87
CDKN1A-206ENST00000462537 THNSL1Q8IYQ7 743 aa20.49■□□□□ 0.87
CDKN1A-206ENST00000462537 COLGALT1Q8NBJ5 622 aa20.49■□□□□ 0.87
CDKN1A-206ENST00000462537 DEPTORQ8TB45 409 aa20.49■□□□□ 0.87
CDKN1A-206ENST00000462537 MRPL9Q9BYD2 267 aaKnown RBP20.49■□□□□ 0.87
CDKN1A-206ENST00000462537 LMAN2LQ9H0V9 348 aa20.49■□□□□ 0.87
CDKN1A-206ENST00000462537 CWH43Q9H720 699 aa20.49■□□□□ 0.87
CDKN1A-206ENST00000462537 INPP5FQ9Y2H2 1132 aa20.49■□□□□ 0.87
CDKN1A-206ENST00000462537 PLXNA4Q9HCM2 1894 aa20.48■□□□□ 0.87
CDKN1A-206ENST00000462537 MEIS3P2A8K0S8 358 aa20.48■□□□□ 0.87
CDKN1A-206ENST00000462537 B4GALT5O43286 388 aa20.48■□□□□ 0.87
CDKN1A-206ENST00000462537 ZNF623O75123 536 aa20.48■□□□□ 0.87
CDKN1A-206ENST00000462537 ITGB1P05556 798 aa20.48■□□□□ 0.87
CDKN1A-206ENST00000462537 MARCKSP29966 332 aaPredicted RBP20.48■□□□□ 0.87
CDKN1A-206ENST00000462537 NAMPTP43490 491 aa20.48■□□□□ 0.87
CDKN1A-206ENST00000462537 GRIN1Q05586 938 aa20.48■□□□□ 0.87
CDKN1A-206ENST00000462537 AMHR2Q16671 573 aa20.48■□□□□ 0.87
CDKN1A-206ENST00000462537 UBXN11Q5T124 520 aa20.48■□□□□ 0.87
CDKN1A-206ENST00000462537 CDCA2Q69YH5 1023 aaPredicted RBP20.48■□□□□ 0.87
CDKN1A-206ENST00000462537 CCDC51Q96ER9 411 aa20.48■□□□□ 0.87
CDKN1A-206ENST00000462537 RUSC1Q9BVN2 902 aa20.48■□□□□ 0.87
CDKN1A-206ENST00000462537 TRIM6Q9C030 488 aaPredicted RBP20.48■□□□□ 0.87
CDKN1A-206ENST00000462537 PRMT7Q9NVM4 692 aaPredicted RBP20.48■□□□□ 0.87
CDKN1A-206ENST00000462537 PLAGL2Q9UPG8 496 aa20.48■□□□□ 0.87
CDKN1A-206ENST00000462537 PRUNE2Q8WUY3 3088 aa20.47■□□□□ 0.87
CDKN1A-206ENST00000462537 ATG2AQ2TAZ0 1938 aa20.47■□□□□ 0.87
CDKN1A-206ENST00000462537 HIP1RO75146 1068 aa20.47■□□□□ 0.87
CDKN1A-206ENST00000462537 ARF4P18085 180 aaPredicted RBP20.47■□□□□ 0.87
CDKN1A-206ENST00000462537 PTPAQ15257 358 aa20.47■□□□□ 0.87
CDKN1A-206ENST00000462537 CSPP1Q1MSJ5 1256 aa20.47■□□□□ 0.87
CDKN1A-206ENST00000462537 TMEM119Q4V9L6 283 aa20.47■□□□□ 0.87
CDKN1A-206ENST00000462537 FOXD4L5Q5VV16 416 aaPredicted RBP20.47■□□□□ 0.87
CDKN1A-206ENST00000462537 RINT1Q6NUQ1 792 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms