RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 TBCAO75347 108 aaKnown RBP12.88□□□□□ -0.35
TRAF3IP1-204ENST00000462122 CSDE1O75534 798 aaKnown RBP12.88□□□□□ -0.35
TRAF3IP1-204ENST00000462122 ERLIN2O94905 339 aa12.88□□□□□ -0.35
TRAF3IP1-204ENST00000462122 FAM13AO94988 1023 aa12.88□□□□□ -0.35
TRAF3IP1-204ENST00000462122 PLS3P13797 630 aa12.88□□□□□ -0.35
TRAF3IP1-204ENST00000462122 PFKFB1P16118 471 aa12.88□□□□□ -0.35
TRAF3IP1-204ENST00000462122 AXLP30530 894 aa12.88□□□□□ -0.35
TRAF3IP1-204ENST00000462122 ZNF131P52739 623 aa12.88□□□□□ -0.35
TRAF3IP1-204ENST00000462122 EFNA5P52803 228 aa12.88□□□□□ -0.35
TRAF3IP1-204ENST00000462122 SMTNP53814 917 aa12.88□□□□□ -0.35
TRAF3IP1-204ENST00000462122 PEX3P56589 373 aa12.88□□□□□ -0.35
TRAF3IP1-204ENST00000462122 SMAD3P84022 425 aaKnown RBP12.88□□□□□ -0.35
TRAF3IP1-204ENST00000462122 AMPD3Q01432 767 aa12.88□□□□□ -0.35
TRAF3IP1-204ENST00000462122 MBTD1Q05BQ5 628 aa12.88□□□□□ -0.35
TRAF3IP1-204ENST00000462122 RAD51AP2Q09MP3 1159 aa12.88□□□□□ -0.35
TRAF3IP1-204ENST00000462122 GIT2Q14161 759 aa12.88□□□□□ -0.35
TRAF3IP1-204ENST00000462122 HABP4Q5JVS0 413 aaKnown RBP12.88□□□□□ -0.35
TRAF3IP1-204ENST00000462122 SPIRE2Q8WWL2 714 aa12.88□□□□□ -0.35
TRAF3IP1-204ENST00000462122 BSNDQ8WZ55 320 aa12.88□□□□□ -0.35
TRAF3IP1-204ENST00000462122 DHX58Q96C10 678 aa12.88□□□□□ -0.35
TRAF3IP1-204ENST00000462122 PRIMPOLQ96LW4 560 aa12.88□□□□□ -0.35
TRAF3IP1-204ENST00000462122 MINDY3Q9H8M7 445 aa12.88□□□□□ -0.35
TRAF3IP1-204ENST00000462122 RGS18Q9NS28 235 aa12.88□□□□□ -0.35
TRAF3IP1-204ENST00000462122 PRMT7Q9NVM4 692 aaPredicted RBP12.88□□□□□ -0.35
TRAF3IP1-204ENST00000462122 DACT1Q9NYF0 836 aa12.88□□□□□ -0.35
TRAF3IP1-204ENST00000462122 USP25Q9UHP3 1055 aa12.88□□□□□ -0.35
TRAF3IP1-204ENST00000462122 PIN4Q9Y237 131 aaKnown RBP12.88□□□□□ -0.35
TRAF3IP1-204ENST00000462122 HPSEQ9Y251 543 aa12.88□□□□□ -0.35
TRAF3IP1-204ENST00000462122 A0A1B0GVL5 298 aa12.87□□□□□ -0.35
TRAF3IP1-204ENST00000462122 H0YCG3 227 aa12.87□□□□□ -0.35
TRAF3IP1-204ENST00000462122 SCP2P22307 547 aa12.87□□□□□ -0.35
TRAF3IP1-204ENST00000462122 FGFR4P22455 802 aa12.87□□□□□ -0.35
TRAF3IP1-204ENST00000462122 NPTX2P47972 431 aa12.87□□□□□ -0.35
TRAF3IP1-204ENST00000462122 DEFB103AP81534 67 aa12.87□□□□□ -0.35
TRAF3IP1-204ENST00000462122 DSC3Q14574 896 aa12.87□□□□□ -0.35
TRAF3IP1-204ENST00000462122 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.87□□□□□ -0.352e-6■■■■□ 23.7
TRAF3IP1-204ENST00000462122 SLC24A5Q71RS6 500 aa12.87□□□□□ -0.35
TRAF3IP1-204ENST00000462122 HERC6Q8IVU3 1022 aa12.87□□□□□ -0.35
TRAF3IP1-204ENST00000462122 CEP57L1Q8IYX8 460 aa12.87□□□□□ -0.35
TRAF3IP1-204ENST00000462122 MYOCDQ8IZQ8 938 aa12.87□□□□□ -0.35
TRAF3IP1-204ENST00000462122 FSIP1Q8NA03 581 aa12.87□□□□□ -0.35
TRAF3IP1-204ENST00000462122 SLC17A8Q8NDX2 589 aa12.87□□□□□ -0.35
TRAF3IP1-204ENST00000462122 LINC01599Q8WXQ3 324 aa12.87□□□□□ -0.35
TRAF3IP1-204ENST00000462122 DDX12PQ92771 950 aa12.87□□□□□ -0.35
TRAF3IP1-204ENST00000462122 TOP1MTQ969P6 601 aa12.87□□□□□ -0.35
TRAF3IP1-204ENST00000462122 CCDC51Q96ER9 411 aa12.87□□□□□ -0.35
TRAF3IP1-204ENST00000462122 ADAM2Q99965 735 aa12.87□□□□□ -0.35
TRAF3IP1-204ENST00000462122 NTPCRQ9BSD7 190 aaKnown RBP12.87□□□□□ -0.35
TRAF3IP1-204ENST00000462122 PARVGQ9HBI0 331 aa12.87□□□□□ -0.35
TRAF3IP1-204ENST00000462122 AGPAT5Q9NUQ2 364 aa12.87□□□□□ -0.35
TRAF3IP1-204ENST00000462122 KBTBD4Q9NVX7 518 aa12.87□□□□□ -0.35
TRAF3IP1-204ENST00000462122 NPHP3-ACAD11A0A0J9YXS1 232 aa12.86□□□□□ -0.35
TRAF3IP1-204ENST00000462122 MYMKA6NI61 221 aa12.86□□□□□ -0.35
TRAF3IP1-204ENST00000462122 CCDC169A6NNP5 214 aa12.86□□□□□ -0.35
TRAF3IP1-204ENST00000462122 SFI1A8K8P3 1242 aa12.86□□□□□ -0.35
TRAF3IP1-204ENST00000462122 MGEA5O60502 916 aa12.86□□□□□ -0.35
TRAF3IP1-204ENST00000462122 TSPAN1O60635 241 aa12.86□□□□□ -0.35
TRAF3IP1-204ENST00000462122 GJB5O95377 273 aa12.86□□□□□ -0.35
TRAF3IP1-204ENST00000462122 STAG3L1P0CL83 205 aa12.86□□□□□ -0.35
TRAF3IP1-204ENST00000462122 ABCD1P33897 745 aa12.86□□□□□ -0.35
TRAF3IP1-204ENST00000462122 SYKP43405 635 aa12.86□□□□□ -0.35
TRAF3IP1-204ENST00000462122 SARSP49591 514 aaKnown RBP12.86□□□□□ -0.35
TRAF3IP1-204ENST00000462122 RAB30Q15771 203 aa12.86□□□□□ -0.35
TRAF3IP1-204ENST00000462122 MAPK6Q16659 721 aa12.86□□□□□ -0.35
TRAF3IP1-204ENST00000462122 AMHR2Q16671 573 aa12.86□□□□□ -0.35
TRAF3IP1-204ENST00000462122 FAM187BQ17R55 369 aa12.86□□□□□ -0.35
TRAF3IP1-204ENST00000462122 NOTUMQ6P988 496 aa12.86□□□□□ -0.35
TRAF3IP1-204ENST00000462122 RTN4RL1Q86UN2 441 aaPredicted RBP12.86□□□□□ -0.35
TRAF3IP1-204ENST00000462122 NPAS4Q8IUM7 802 aa12.86□□□□□ -0.35
TRAF3IP1-204ENST00000462122 TMEM87AQ8NBN3 555 aa12.86□□□□□ -0.35
TRAF3IP1-204ENST00000462122 TRAIPQ9BWF2 469 aa12.86□□□□□ -0.35
TRAF3IP1-204ENST00000462122 CCDC113Q9H0I3 377 aa12.86□□□□□ -0.35
TRAF3IP1-204ENST00000462122 FZD8Q9H461 694 aa12.86□□□□□ -0.35
TRAF3IP1-204ENST00000462122 POLD4Q9HCU8 107 aa12.86□□□□□ -0.35
TRAF3IP1-204ENST00000462122 KMT5AQ9NQR1 393 aa12.86□□□□□ -0.35
TRAF3IP1-204ENST00000462122 ARHGAP28Q9P2N2 729 aa12.86□□□□□ -0.35
TRAF3IP1-204ENST00000462122 SEL1LQ9UBV2 794 aa12.86□□□□□ -0.35
TRAF3IP1-204ENST00000462122 MICAL3Q7RTP6 2002 aa12.86□□□□□ -0.35
TRAF3IP1-204ENST00000462122 ADGRA3Q8IWK6 1321 aa12.86□□□□□ -0.35
TRAF3IP1-204ENST00000462122 CNTNAP2Q9UHC6 1331 aa12.86□□□□□ -0.35
TRAF3IP1-204ENST00000462122 C9IYK1 514 aa12.85□□□□□ -0.35
TRAF3IP1-204ENST00000462122 K7ERI5 159 aa12.85□□□□□ -0.35
TRAF3IP1-204ENST00000462122 ACKR2O00590 384 aa12.85□□□□□ -0.35
TRAF3IP1-204ENST00000462122 PRKCBP05771 671 aa12.85□□□□□ -0.35
TRAF3IP1-204ENST00000462122 SLFN14P0C7P3 912 aa12.85□□□□□ -0.35
TRAF3IP1-204ENST00000462122 SKIP12755 728 aa12.85□□□□□ -0.35
TRAF3IP1-204ENST00000462122 GAP43P17677 238 aa12.85□□□□□ -0.35
TRAF3IP1-204ENST00000462122 HOXA11P31270 313 aaPredicted RBP12.85□□□□□ -0.35
TRAF3IP1-204ENST00000462122 RAB27AP51159 221 aa12.85□□□□□ -0.35
TRAF3IP1-204ENST00000462122 NDUFA8P51970 172 aa12.85□□□□□ -0.35
TRAF3IP1-204ENST00000462122 NCKAP1LP55160 1127 aa12.85□□□□□ -0.35
TRAF3IP1-204ENST00000462122 TWF2Q6IBS0 349 aaKnown RBP12.85□□□□□ -0.35
TRAF3IP1-204ENST00000462122 FAM109BQ6ICB4 259 aaPredicted RBP12.85□□□□□ -0.35
TRAF3IP1-204ENST00000462122 CNNM4Q6P4Q7 775 aa12.85□□□□□ -0.35
TRAF3IP1-204ENST00000462122 DYMQ7RTS9 669 aa12.85□□□□□ -0.35
TRAF3IP1-204ENST00000462122 MYCT1Q8N699 235 aa12.85□□□□□ -0.35
TRAF3IP1-204ENST00000462122 KCNN1Q92952 543 aa12.85□□□□□ -0.35
TRAF3IP1-204ENST00000462122 DNAJC19Q96DA6 116 aa12.85□□□□□ -0.35
TRAF3IP1-204ENST00000462122 CCDC34Q96HJ3 373 aa12.85□□□□□ -0.35
TRAF3IP1-204ENST00000462122 ZBED2Q9BTP6 218 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms