RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 DRG2P55039 364 aaKnown RBP19.92■□□□□ 0.78
HPS3-204ENST00000462030 ITIH4Q14624 930 aa19.92■□□□□ 0.78
HPS3-204ENST00000462030 USH1GQ495M9 461 aa19.92■□□□□ 0.78
HPS3-204ENST00000462030 MYCT1Q8N699 235 aa19.92■□□□□ 0.78
HPS3-204ENST00000462030 TBC1D16Q8TBP0 767 aa19.92■□□□□ 0.78
HPS3-204ENST00000462030 SLC20A1Q8WUM9 679 aa19.92■□□□□ 0.78
HPS3-204ENST00000462030 NOD2Q9HC29 1040 aa19.92■□□□□ 0.78
HPS3-204ENST00000462030 BAIAP2L1Q9UHR4 511 aa19.92■□□□□ 0.78
HPS3-204ENST00000462030 SUFUQ9UMX1 484 aa19.92■□□□□ 0.78
HPS3-204ENST00000462030 PPP1R12BO60237 982 aaPredicted RBP19.92■□□□□ 0.78
HPS3-204ENST00000462030 FAM13AO94988 1023 aa19.92■□□□□ 0.78
HPS3-204ENST00000462030 VIMP08670 466 aaKnown RBP19.92■□□□□ 0.78
HPS3-204ENST00000462030 CTTNQ14247 550 aaKnown RBP19.92■□□□□ 0.78
HPS3-204ENST00000462030 CCDC38Q502W7 563 aa19.92■□□□□ 0.78
HPS3-204ENST00000462030 FAM133BQ5BKY9 247 aaKnown RBP19.92■□□□□ 0.78
HPS3-204ENST00000462030 PRR5LQ6MZQ0 368 aa19.92■□□□□ 0.78
HPS3-204ENST00000462030 TBC1D31Q96DN5 1066 aa19.92■□□□□ 0.78
HPS3-204ENST00000462030 USP40Q9NVE5 1235 aa19.92■□□□□ 0.78
HPS3-204ENST00000462030 DONSONQ9NYP3 566 aa19.92■□□□□ 0.78
HPS3-204ENST00000462030 APEX2Q9UBZ4 518 aa19.92■□□□□ 0.78
HPS3-204ENST00000462030 CHORDC1Q9UHD1 332 aaPredicted RBP19.92■□□□□ 0.78
HPS3-204ENST00000462030 CCNL1Q9UK58 526 aaPredicted RBP19.92■□□□□ 0.78
HPS3-204ENST00000462030 BCS1LQ9Y276 419 aa19.92■□□□□ 0.78
HPS3-204ENST00000462030 FAM196BA6NMK8 535 aa19.91■□□□□ 0.78
HPS3-204ENST00000462030 ANKRD63C9JTQ0 380 aa19.91■□□□□ 0.78
HPS3-204ENST00000462030 ZBTB39O15060 712 aa19.91■□□□□ 0.78
HPS3-204ENST00000462030 AGTP01019 485 aa19.91■□□□□ 0.78
HPS3-204ENST00000462030 ADCY2Q08462 1091 aa19.91■□□□□ 0.78
HPS3-204ENST00000462030 COL23A1Q86Y22 540 aaPredicted RBP19.91■□□□□ 0.78
HPS3-204ENST00000462030 CCDC63Q8NA47 563 aa19.91■□□□□ 0.78
HPS3-204ENST00000462030 CCDC113Q9H0I3 377 aa19.91■□□□□ 0.78
HPS3-204ENST00000462030 ABCF3Q9NUQ8 709 aa19.91■□□□□ 0.78
HPS3-204ENST00000462030 SAMD15Q9P1V8 674 aa19.91■□□□□ 0.78
HPS3-204ENST00000462030 PCDHA3Q9Y5H8 950 aa19.91■□□□□ 0.78
HPS3-204ENST00000462030 SYNGAP1Q96PV0 1343 aa19.91■□□□□ 0.78
HPS3-204ENST00000462030 C6orf229H3BNL8 230 aa19.91■□□□□ 0.78
HPS3-204ENST00000462030 FOXN3O00409 490 aaPredicted RBP19.91■□□□□ 0.78
HPS3-204ENST00000462030 EIF3DO15371 548 aaKnown RBP eCLIP19.91■□□□□ 0.78
HPS3-204ENST00000462030 SLC8A1P32418 973 aa19.91■□□□□ 0.78
HPS3-204ENST00000462030 C6orf118Q5T5N4 469 aa19.91■□□□□ 0.78
HPS3-204ENST00000462030 PHLDB3Q6NSJ2 640 aa19.91■□□□□ 0.78
HPS3-204ENST00000462030 TCP11Q8WWU5 503 aa19.91■□□□□ 0.78
HPS3-204ENST00000462030 FAM20AQ96MK3 541 aa19.91■□□□□ 0.78
HPS3-204ENST00000462030 VEZTQ9HBM0 779 aa19.91■□□□□ 0.78
HPS3-204ENST00000462030 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.91■□□□□ 0.78
HPS3-204ENST00000462030 GSTA1P08263 222 aa19.9■□□□□ 0.78
HPS3-204ENST00000462030 GAP43P17677 238 aa19.9■□□□□ 0.78
HPS3-204ENST00000462030 SCP2P22307 547 aa19.9■□□□□ 0.78
HPS3-204ENST00000462030 CHRNA3P32297 505 aa19.9■□□□□ 0.78
HPS3-204ENST00000462030 TRPM8Q7Z2W7 1104 aa19.9■□□□□ 0.78
HPS3-204ENST00000462030 CERS5Q8N5B7 392 aa19.9■□□□□ 0.78
HPS3-204ENST00000462030 CTTNBP2NLQ9P2B4 639 aa19.9■□□□□ 0.78
HPS3-204ENST00000462030 DBR1Q9UK59 544 aaKnown RBP19.9■□□□□ 0.78
HPS3-204ENST00000462030 AGAP1Q9UPQ3 857 aa19.9■□□□□ 0.78
HPS3-204ENST00000462030 TCRBV7S2A1N4TA0A589 114 aa19.9■□□□□ 0.78
HPS3-204ENST00000462030 RIPK2O43353 540 aa19.9■□□□□ 0.78
HPS3-204ENST00000462030 EEF2P13639 858 aaKnown RBP19.9■□□□□ 0.78
HPS3-204ENST00000462030 SREBF1P36956 1147 aa19.9■□□□□ 0.78
HPS3-204ENST00000462030 SCNN1DP51172 638 aa19.9■□□□□ 0.78
HPS3-204ENST00000462030 MYL7Q01449 175 aa19.9■□□□□ 0.78
HPS3-204ENST00000462030 NBPF9Q3BBW0 867 aa19.9■□□□□ 0.78
HPS3-204ENST00000462030 SLFN13Q68D06 897 aa19.9■□□□□ 0.78
HPS3-204ENST00000462030 TBC1D1Q86TI0 1168 aaPredicted RBP19.9■□□□□ 0.78
HPS3-204ENST00000462030 AGPAT1Q99943 283 aa19.9■□□□□ 0.78
HPS3-204ENST00000462030 POLR3CQ9BUI4 534 aaPredicted RBP19.9■□□□□ 0.78
HPS3-204ENST00000462030 DNAJC18Q9H819 358 aa19.9■□□□□ 0.78
HPS3-204ENST00000462030 CNOT7Q9UIV1 285 aaKnown RBP19.9■□□□□ 0.78
HPS3-204ENST00000462030 CTNNA2P26232 953 aa19.89■□□□□ 0.77
HPS3-204ENST00000462030 HOXA13P31271 388 aaPredicted RBP19.89■□□□□ 0.77
HPS3-204ENST00000462030 AUHQ13825 339 aaKnown RBP19.89■□□□□ 0.77
HPS3-204ENST00000462030 KIF22Q14807 665 aa19.89■□□□□ 0.77
HPS3-204ENST00000462030 ACCSLQ4AC99 568 aa19.89■□□□□ 0.77
HPS3-204ENST00000462030 CCDC137Q6PK04 289 aaKnown RBP19.89■□□□□ 0.77
HPS3-204ENST00000462030 FIZ1Q96SL8 496 aa19.89■□□□□ 0.77
HPS3-204ENST00000462030 ZSWIM1Q9BR11 485 aa19.89■□□□□ 0.77
HPS3-204ENST00000462030 CCDC134Q9H6E4 229 aa19.89■□□□□ 0.77
HPS3-204ENST00000462030 MTRF1LQ9UGC7 380 aaKnown RBP19.89■□□□□ 0.77
HPS3-204ENST00000462030 PCYOX1Q9UHG3 505 aa19.89■□□□□ 0.77
HPS3-204ENST00000462030 GGT7Q9UJ14 662 aa19.89■□□□□ 0.77
HPS3-204ENST00000462030 CD2APQ9Y5K6 639 aa19.89■□□□□ 0.77
HPS3-204ENST00000462030 BTAF1O14981 1849 aa19.89■□□□□ 0.77
HPS3-204ENST00000462030 AFF2P51816 1311 aa19.89■□□□□ 0.77
HPS3-204ENST00000462030 AHDC1Q5TGY3 1603 aaPredicted RBP19.89■□□□□ 0.77
HPS3-204ENST00000462030 RIMBP2O15034 1052 aa19.88■□□□□ 0.77
HPS3-204ENST00000462030 CLTAP09496 248 aa19.88■□□□□ 0.77
HPS3-204ENST00000462030 NFIAQ12857 509 aa19.88■□□□□ 0.77
HPS3-204ENST00000462030 CNGA2Q16280 664 aa19.88■□□□□ 0.77
HPS3-204ENST00000462030 TLDC1Q6P9B6 456 aa19.88■□□□□ 0.77
HPS3-204ENST00000462030 CPNE8Q86YQ8 564 aa19.88■□□□□ 0.77
HPS3-204ENST00000462030 ZFPM1Q8IX07 1006 aa19.88■□□□□ 0.77
HPS3-204ENST00000462030 RHOT2Q8IXI1 618 aa19.88■□□□□ 0.77
HPS3-204ENST00000462030 MKNK1Q9BUB5 465 aa19.88■□□□□ 0.77
HPS3-204ENST00000462030 ATP6V0A4Q9HBG4 840 aa19.88■□□□□ 0.77
HPS3-204ENST00000462030 PTPN22Q9Y2R2 807 aa19.88■□□□□ 0.77
HPS3-204ENST00000462030 NFIL3Q16649 462 aa19.88■□□□□ 0.77
HPS3-204ENST00000462030 TNFAIP8L3Q5GJ75 292 aa19.88■□□□□ 0.77
HPS3-204ENST00000462030 ZNF746Q6NUN9 644 aaPredicted RBP19.88■□□□□ 0.77
HPS3-204ENST00000462030 C1orf186Q6ZWK4 172 aa19.88■□□□□ 0.77
HPS3-204ENST00000462030 PNMA8AQ86V59 439 aaPredicted RBP19.88■□□□□ 0.77
HPS3-204ENST00000462030 TPH2Q8IWU9 490 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms