RNA–Protein interactions for RNA: ENST00000461477.5

NECTIN3-202, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 4

Gene NECTIN3, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-202ENST00000461477 BCAR1P56945 870 aa10.56□□□□□ -0.72
NECTIN3-202ENST00000461477 TRMT1LQ7Z2T5 733 aaKnown RBP10.56□□□□□ -0.72
NECTIN3-202ENST00000461477 CATIPQ7Z7H3 387 aa10.56□□□□□ -0.72
NECTIN3-202ENST00000461477 VPS52Q8N1B4 723 aa10.56□□□□□ -0.72
NECTIN3-202ENST00000461477 CCDC82Q8N4S0 544 aa10.56□□□□□ -0.72
NECTIN3-202ENST00000461477 RNF169Q8NCN4 708 aa10.56□□□□□ -0.72
NECTIN3-202ENST00000461477 ST13P5Q8NFI4 369 aaPredicted RBP10.56□□□□□ -0.72
NECTIN3-202ENST00000461477 CCDC136Q96JN2 1154 aa10.56□□□□□ -0.72
NECTIN3-202ENST00000461477 TMEM134Q9H6X4 195 aa10.56□□□□□ -0.72
NECTIN3-202ENST00000461477 DLGAP2Q9P1A6 1054 aa10.56□□□□□ -0.72
NECTIN3-202ENST00000461477 USTQ9Y2C2 406 aa10.56□□□□□ -0.72
NECTIN3-202ENST00000461477 CEP295Q9C0D2 2601 aa10.56□□□□□ -0.72
NECTIN3-202ENST00000461477 HIP1O00291 1037 aa10.55□□□□□ -0.72
NECTIN3-202ENST00000461477 MEIS1O00470 390 aa10.55□□□□□ -0.72
NECTIN3-202ENST00000461477 MAFGO15525 162 aa10.55□□□□□ -0.72
NECTIN3-202ENST00000461477 LMNAP02545 664 aaKnown RBP10.55□□□□□ -0.72
NECTIN3-202ENST00000461477 CFHP08603 1231 aa10.55□□□□□ -0.72
NECTIN3-202ENST00000461477 GLULP15104 373 aa10.55□□□□□ -0.72
NECTIN3-202ENST00000461477 CA8P35219 290 aa10.55□□□□□ -0.72
NECTIN3-202ENST00000461477 PPM1AP35813 382 aa10.55□□□□□ -0.72
NECTIN3-202ENST00000461477 KRT17Q04695 432 aa10.55□□□□□ -0.72
NECTIN3-202ENST00000461477 TDGQ13569 410 aa10.55□□□□□ -0.72
NECTIN3-202ENST00000461477 LONRF3Q496Y0 759 aa10.55□□□□□ -0.72
NECTIN3-202ENST00000461477 ATAT1Q5SQI0 421 aa10.55□□□□□ -0.72
NECTIN3-202ENST00000461477 WWC2Q6AWC2 1192 aa10.55□□□□□ -0.72
NECTIN3-202ENST00000461477 SWSAP1Q6NVH7 229 aa10.55□□□□□ -0.72
NECTIN3-202ENST00000461477 GPR149Q86SP6 731 aa10.55□□□□□ -0.72
NECTIN3-202ENST00000461477 MAML2Q8IZL2 1156 aaPredicted RBP10.55□□□□□ -0.72
NECTIN3-202ENST00000461477 LRRC71Q8N4P6 559 aa10.55□□□□□ -0.72
NECTIN3-202ENST00000461477 LPPQ93052 612 aa10.55□□□□□ -0.72
NECTIN3-202ENST00000461477 MAP3K14Q99558 947 aa10.55□□□□□ -0.72
NECTIN3-202ENST00000461477 DLL3Q9NYJ7 618 aa10.55□□□□□ -0.72
NECTIN3-202ENST00000461477 DNAJB4Q9UDY4 337 aa10.55□□□□□ -0.72
NECTIN3-202ENST00000461477 BAHCC1Q9P281 2608 aa10.55□□□□□ -0.72
NECTIN3-202ENST00000461477 PATJQ8NI35 1801 aa10.55□□□□□ -0.72
NECTIN3-202ENST00000461477 COL1A2P08123 1366 aa10.54□□□□□ -0.72
NECTIN3-202ENST00000461477 SPDYE3A6NKU9 549 aa10.54□□□□□ -0.72
NECTIN3-202ENST00000461477 FAM86B1E9PN63 330 aa10.54□□□□□ -0.72
NECTIN3-202ENST00000461477 BACH1O14867 736 aa10.54□□□□□ -0.72
NECTIN3-202ENST00000461477 LRRN2O75325 713 aa10.54□□□□□ -0.72
NECTIN3-202ENST00000461477 DDAH1O94760 285 aa10.54□□□□□ -0.72
NECTIN3-202ENST00000461477 DCNP07585 359 aaKnown RBP10.54□□□□□ -0.72
NECTIN3-202ENST00000461477 FAM86B2P0C5J1 330 aa10.54□□□□□ -0.72
NECTIN3-202ENST00000461477 MYBP10242 640 aa10.54□□□□□ -0.72
NECTIN3-202ENST00000461477 SMARCA1P28370 1054 aa10.54□□□□□ -0.72
NECTIN3-202ENST00000461477 AFF1P51825 1210 aaKnown RBP10.54□□□□□ -0.72
NECTIN3-202ENST00000461477 NLRP11P59045 1033 aaKnown RBP10.54□□□□□ -0.72
NECTIN3-202ENST00000461477 TRDNQ13061 729 aa10.54□□□□□ -0.72
NECTIN3-202ENST00000461477 DRP2Q13474 957 aa10.54□□□□□ -0.72
NECTIN3-202ENST00000461477 PTPN14Q15678 1187 aa10.54□□□□□ -0.72
NECTIN3-202ENST00000461477 CEP55Q53EZ4 464 aa10.54□□□□□ -0.72
NECTIN3-202ENST00000461477 ZNF484Q5JVG2 852 aa10.54□□□□□ -0.72
NECTIN3-202ENST00000461477 PDXDC2PQ6P474 469 aa10.54□□□□□ -0.72
NECTIN3-202ENST00000461477 NBEAQ8NFP9 2946 aa10.54□□□□□ -0.72
NECTIN3-202ENST00000461477 NCOA7Q8NI08 942 aa10.54□□□□□ -0.72
NECTIN3-202ENST00000461477 KCNG4Q8TDN1 519 aa10.54□□□□□ -0.72
NECTIN3-202ENST00000461477 SDF4Q9BRK5 362 aa10.54□□□□□ -0.72
NECTIN3-202ENST00000461477 NRDE2Q9H7Z3 1164 aa10.54□□□□□ -0.72
NECTIN3-202ENST00000461477 ZNF302Q9NR11 478 aa10.54□□□□□ -0.72
NECTIN3-202ENST00000461477 DZANK1Q9NVP4 752 aa10.54□□□□□ -0.72
NECTIN3-202ENST00000461477 SEC63Q9UGP8 760 aaKnown RBP10.54□□□□□ -0.72
NECTIN3-202ENST00000461477 CA14Q9ULX7 337 aa10.54□□□□□ -0.72
NECTIN3-202ENST00000461477 IRAK3Q9Y616 596 aa10.54□□□□□ -0.72
NECTIN3-202ENST00000461477 MIA3Q5JRA6 1907 aa10.53□□□□□ -0.72
NECTIN3-202ENST00000461477 MYH15Q9Y2K3 1946 aa10.53□□□□□ -0.72
NECTIN3-202ENST00000461477 IGLV3-22A0A075B6J6 115 aa10.53□□□□□ -0.72
NECTIN3-202ENST00000461477 A0A0U1RQF3 1178 aa10.53□□□□□ -0.72
NECTIN3-202ENST00000461477 ERICH2A1L162 156 aa10.53□□□□□ -0.72
NECTIN3-202ENST00000461477 TULP1O00294 542 aaPredicted RBP10.53□□□□□ -0.72
NECTIN3-202ENST00000461477 SH2B2O14492 632 aaPredicted RBP10.53□□□□□ -0.72
NECTIN3-202ENST00000461477 LILRB3O75022 631 aa10.53□□□□□ -0.72
NECTIN3-202ENST00000461477 ZC3H11AO75152 810 aaKnown RBP eCLIP10.53□□□□□ -0.72
NECTIN3-202ENST00000461477 SP9P0CG40 484 aa10.53□□□□□ -0.72
NECTIN3-202ENST00000461477 CTSAP10619 480 aa10.53□□□□□ -0.72
NECTIN3-202ENST00000461477 CLCN4P51793 760 aa10.53□□□□□ -0.72
NECTIN3-202ENST00000461477 SPECC1Q5M775 1068 aa10.53□□□□□ -0.72
NECTIN3-202ENST00000461477 TMTC3Q6ZXV5 915 aa10.53□□□□□ -0.72
NECTIN3-202ENST00000461477 HEATR3Q7Z4Q2 680 aa10.53□□□□□ -0.72
NECTIN3-202ENST00000461477 ZNF280BQ86YH2 543 aa10.53□□□□□ -0.72
NECTIN3-202ENST00000461477 METTL13Q8N6R0 699 aa10.53□□□□□ -0.72
NECTIN3-202ENST00000461477 SUMF1Q8NBK3 374 aa10.53□□□□□ -0.72
NECTIN3-202ENST00000461477 CTCFLQ8NI51 663 aaPredicted RBP10.53□□□□□ -0.72
NECTIN3-202ENST00000461477 CRYGNQ8WXF5 182 aa10.53□□□□□ -0.72
NECTIN3-202ENST00000461477 IGSF21Q96ID5 467 aa10.53□□□□□ -0.72
NECTIN3-202ENST00000461477 MYADMQ96S97 322 aa10.53□□□□□ -0.72
NECTIN3-202ENST00000461477 RTP3Q9BQQ7 232 aa10.53□□□□□ -0.72
NECTIN3-202ENST00000461477 LRRC2Q9BYS8 371 aa10.53□□□□□ -0.72
NECTIN3-202ENST00000461477 ANO3Q9BYT9 981 aa10.53□□□□□ -0.72
NECTIN3-202ENST00000461477 MAFBQ9Y5Q3 323 aaPredicted RBP10.53□□□□□ -0.72
NECTIN3-202ENST00000461477 CNTNAP5Q8WYK1 1306 aa10.53□□□□□ -0.72
NECTIN3-202ENST00000461477 HOXA2O43364 376 aa10.52□□□□□ -0.73
NECTIN3-202ENST00000461477 PRC1O43663 620 aa10.52□□□□□ -0.73
NECTIN3-202ENST00000461477 EDIL3O43854 480 aa10.52□□□□□ -0.73
NECTIN3-202ENST00000461477 ZNF862O60290 1169 aa10.52□□□□□ -0.73
NECTIN3-202ENST00000461477 SSBP05455 408 aaKnown RBP eCLIP10.52□□□□□ -0.73
NECTIN3-202ENST00000461477 GALTP07902 379 aa10.52□□□□□ -0.73
NECTIN3-202ENST00000461477 CNPP09543 421 aaKnown RBP10.52□□□□□ -0.73
NECTIN3-202ENST00000461477 EIF4BP23588 611 aaKnown RBP10.52□□□□□ -0.73
NECTIN3-202ENST00000461477 SLC11A1P49279 550 aa10.52□□□□□ -0.73
NECTIN3-202ENST00000461477 CLK2P49760 499 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms