RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 PPIL2Q13356 520 aa9.47□□□□□ -0.89
ECHDC1-212ENST00000461239 ALX1Q15699 326 aa9.47□□□□□ -0.89
ECHDC1-212ENST00000461239 PAOXQ6QHF9 649 aa9.47□□□□□ -0.89
ECHDC1-212ENST00000461239 CRACR2BQ8N4Y2 399 aaPredicted RBP9.47□□□□□ -0.89
ECHDC1-212ENST00000461239 BTN2A2Q8WVV5 523 aa9.47□□□□□ -0.89
ECHDC1-212ENST00000461239 BRI3BPQ8WY22 251 aa9.47□□□□□ -0.89
ECHDC1-212ENST00000461239 COX4I2Q96KJ9 171 aa9.47□□□□□ -0.89
ECHDC1-212ENST00000461239 KCNF1Q9H3M0 494 aa9.47□□□□□ -0.89
ECHDC1-212ENST00000461239 AFG3L2Q9Y4W6 797 aa9.47□□□□□ -0.89
ECHDC1-212ENST00000461239 ROBO3Q96MS0 1386 aa9.47□□□□□ -0.89
ECHDC1-212ENST00000461239 LAMB1P07942 1786 aa9.47□□□□□ -0.89
ECHDC1-212ENST00000461239 DHX15O43143 795 aaKnown RBP9.46□□□□□ -0.9
ECHDC1-212ENST00000461239 SGSM2O43147 1006 aa9.46□□□□□ -0.9
ECHDC1-212ENST00000461239 GH2P01242 217 aa9.46□□□□□ -0.9
ECHDC1-212ENST00000461239 APPP05067 770 aa9.46□□□□□ -0.9
ECHDC1-212ENST00000461239 FAM87AP0C7U9 286 aa9.46□□□□□ -0.9
ECHDC1-212ENST00000461239 AKR1B1P15121 316 aa9.46□□□□□ -0.9
ECHDC1-212ENST00000461239 SUMO1P63165 101 aaKnown RBP9.46□□□□□ -0.9
ECHDC1-212ENST00000461239 PTH1RQ03431 593 aa9.46□□□□□ -0.9
ECHDC1-212ENST00000461239 CERKLQ49MI3 558 aaPredicted RBP9.46□□□□□ -0.9
ECHDC1-212ENST00000461239 FNDC3BQ53EP0 1204 aaKnown RBP9.46□□□□□ -0.9
ECHDC1-212ENST00000461239 POMZP3Q6PJE2 187 aa9.46□□□□□ -0.9
ECHDC1-212ENST00000461239 NSMFQ6X4W1 530 aa9.46□□□□□ -0.9
ECHDC1-212ENST00000461239 TMC3Q7Z5M5 1100 aa9.46□□□□□ -0.9
ECHDC1-212ENST00000461239 SIAH1Q8IUQ4 282 aa9.46□□□□□ -0.9
ECHDC1-212ENST00000461239 STK11IPQ8N1F8 1099 aa9.46□□□□□ -0.9
ECHDC1-212ENST00000461239 FIBCD1Q8N539 461 aa9.46□□□□□ -0.9
ECHDC1-212ENST00000461239 DTWD2Q8NBA8 298 aa9.46□□□□□ -0.9
ECHDC1-212ENST00000461239 CLUHP3Q96NS8 147 aa9.46□□□□□ -0.9
ECHDC1-212ENST00000461239 IER2Q9BTL4 223 aa9.46□□□□□ -0.9
ECHDC1-212ENST00000461239 R3HDMLQ9H3Y0 253 aa9.46□□□□□ -0.9
ECHDC1-212ENST00000461239 NOL6Q9H6R4 1146 aaKnown RBP9.46□□□□□ -0.9
ECHDC1-212ENST00000461239 DIAPH3Q9NSV4 1193 aa9.46□□□□□ -0.9
ECHDC1-212ENST00000461239 GFOD1Q9NXC2 390 aa9.46□□□□□ -0.9
ECHDC1-212ENST00000461239 ARPP21Q9UBL0 812 aaPredicted RBP9.46□□□□□ -0.9
ECHDC1-212ENST00000461239 ZBTB21Q9ULJ3 1066 aa9.46□□□□□ -0.9
ECHDC1-212ENST00000461239 DIS3Q9Y2L1 958 aaKnown RBP9.46□□□□□ -0.9
ECHDC1-212ENST00000461239 ZHX2Q9Y6X8 837 aa9.46□□□□□ -0.9
ECHDC1-212ENST00000461239 DOCK1Q14185 1865 aa9.45□□□□□ -0.9
ECHDC1-212ENST00000461239 HIP1O00291 1037 aa9.45□□□□□ -0.9
ECHDC1-212ENST00000461239 C6orf222P0C671 652 aaPredicted RBP9.45□□□□□ -0.9
ECHDC1-212ENST00000461239 HSPA1AP0DMV8 641 aaKnown RBP9.45□□□□□ -0.9
ECHDC1-212ENST00000461239 HSPA1BP0DMV9 641 aaKnown RBP9.45□□□□□ -0.9
ECHDC1-212ENST00000461239 CHRNA4P43681 627 aa9.45□□□□□ -0.9
ECHDC1-212ENST00000461239 TDO2P48775 406 aa9.45□□□□□ -0.9
ECHDC1-212ENST00000461239 PPARAQ07869 468 aa9.45□□□□□ -0.9
ECHDC1-212ENST00000461239 XP32Q5T750 250 aa9.45□□□□□ -0.9
ECHDC1-212ENST00000461239 GTF2IRD2BQ6EKJ0 949 aa9.45□□□□□ -0.9
ECHDC1-212ENST00000461239 GTF2IRD2Q86UP8 949 aa9.45□□□□□ -0.9
ECHDC1-212ENST00000461239 THNSL2Q86YJ6 484 aa9.45□□□□□ -0.9
ECHDC1-212ENST00000461239 CLEC10AQ8IUN9 316 aa9.45□□□□□ -0.9
ECHDC1-212ENST00000461239 DHX37Q8IY37 1157 aaKnown RBP9.45□□□□□ -0.9
ECHDC1-212ENST00000461239 RPUSD2Q8IZ73 545 aaKnown RBP9.45□□□□□ -0.9
ECHDC1-212ENST00000461239 IPO9Q96P70 1041 aaKnown RBP9.45□□□□□ -0.9
ECHDC1-212ENST00000461239 FAM83CQ9BQN1 747 aa9.45□□□□□ -0.9
ECHDC1-212ENST00000461239 MRPL4Q9BYD3 311 aaKnown RBP9.45□□□□□ -0.9
ECHDC1-212ENST00000461239 NAPBQ9H115 298 aa9.45□□□□□ -0.9
ECHDC1-212ENST00000461239 PRDM5Q9NQX1 630 aaPredicted RBP9.45□□□□□ -0.9
ECHDC1-212ENST00000461239 RNF186Q9NXI6 227 aa9.45□□□□□ -0.9
ECHDC1-212ENST00000461239 ANAPC4Q9UJX5 808 aa9.45□□□□□ -0.9
ECHDC1-212ENST00000461239 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.45□□□□□ -0.9
ECHDC1-212ENST00000461239 DNAJC25-GNG10A0A024R161 153 aa9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 A0A087X0B3 334 aa9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 A0A0G2JLL6 359 aaPredicted RBP9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 A0A1W2PRG0 241 aa9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 MANSC4A6NHS7 340 aaPredicted RBP9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 BTBD19C9JJ37 291 aa9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 CXCL11O14625 94 aa9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 FOXN1O15353 648 aa9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 SIGLEC6O43699 453 aa9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 DLX3O60479 287 aa9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 PRDM1O75626 825 aa9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 KCNH1O95259 989 aa9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 ASNSP08243 561 aa9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 GTF2A2P52657 109 aa9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 ANAPC15P60006 121 aa9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 SPP2Q13103 211 aa9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 GRB10Q13322 594 aa9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 SEPT2Q15019 361 aa9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 SF1Q15637 639 aaKnown RBP9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 ABCB5Q2M3G0 1257 aa9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 SFRP5Q5T4F7 317 aa9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 C22orf34Q6ZV56 151 aa9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 PRRT2Q7Z6L0 340 aaPredicted RBP9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 FAM43AQ8N2R8 423 aa9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 TMEM151AQ8N4L1 468 aa9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 ACER1Q8TDN7 264 aa9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 HEXIM2Q96MH2 286 aaKnown RBP9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 DSCC1Q9BVC3 393 aa9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 NACAP1Q9BZK3 213 aa9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 SWAP70Q9UH65 585 aa9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 TAF6LQ9Y6J9 622 aa9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 ZMYM6O95789 1325 aa9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 RAD50Q92878 1312 aa9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 ATAD5Q96QE3 1844 aa9.44□□□□□ -0.9
ECHDC1-212ENST00000461239 CCL15-CCL14A0A0B4J2E2 113 aa9.43□□□□□ -0.9
ECHDC1-212ENST00000461239 IGKV6D-41A0A0C4DH26 115 aa9.43□□□□□ -0.9
ECHDC1-212ENST00000461239 TRIM75PA6NK02 468 aa9.43□□□□□ -0.9
ECHDC1-212ENST00000461239 ADMP35318 185 aa9.43□□□□□ -0.9
ECHDC1-212ENST00000461239 GFRA1P56159 465 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms