RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 MAEAQ7L5Y9 396 aa24.97■■□□□ 1.59
TRAF4-207ENST00000461195 IFNLR1Q8IU57 520 aaPredicted RBP24.97■■□□□ 1.59
TRAF4-207ENST00000461195 P2RX5Q93086 422 aa24.97■■□□□ 1.59
TRAF4-207ENST00000461195 ASB2Q96Q27 587 aa24.97■■□□□ 1.59
TRAF4-207ENST00000461195 RNF19AQ9NV58 838 aa24.97■■□□□ 1.59
TRAF4-207ENST00000461195 ERLIN2O94905 339 aa24.96■■□□□ 1.59
TRAF4-207ENST00000461195 ATF7P17544 494 aaPredicted RBP24.96■■□□□ 1.59
TRAF4-207ENST00000461195 CYP11B2P19099 503 aa24.96■■□□□ 1.59
TRAF4-207ENST00000461195 SYT1P21579 422 aa24.96■■□□□ 1.59
TRAF4-207ENST00000461195 CASD1Q96PB1 797 aa24.96■■□□□ 1.59
TRAF4-207ENST00000461195 NFKBIZQ9BYH8 718 aa24.96■■□□□ 1.59
TRAF4-207ENST00000461195 LMAN2LQ9H0V9 348 aa24.96■■□□□ 1.59
TRAF4-207ENST00000461195 BHMT2Q9H2M3 363 aa24.96■■□□□ 1.59
TRAF4-207ENST00000461195 GPRC5CQ9NQ84 441 aa24.96■■□□□ 1.59
TRAF4-207ENST00000461195 AAASQ9NRG9 546 aa24.96■■□□□ 1.59
TRAF4-207ENST00000461195 FOXD4L1Q9NU39 408 aa24.96■■□□□ 1.59
TRAF4-207ENST00000461195 FAM105AQ9NUU6 356 aa24.96■■□□□ 1.59
TRAF4-207ENST00000461195 TYW1Q9NV66 732 aaKnown RBP24.96■■□□□ 1.59
TRAF4-207ENST00000461195 VWA3AA6NCI4 1184 aa24.95■■□□□ 1.58
TRAF4-207ENST00000461195 INO80B-WBP1J3KQ70 363 aa24.95■■□□□ 1.58
TRAF4-207ENST00000461195 GRM6O15303 877 aa24.95■■□□□ 1.58
TRAF4-207ENST00000461195 BMP15O95972 392 aa24.95■■□□□ 1.58
TRAF4-207ENST00000461195 CDC25AP30304 524 aa24.95■■□□□ 1.58
TRAF4-207ENST00000461195 RAB27AP51159 221 aa24.95■■□□□ 1.58
TRAF4-207ENST00000461195 DNM3Q9UQ16 869 aa24.95■■□□□ 1.58
TRAF4-207ENST00000461195 PCDHB12Q9Y5F1 795 aa24.95■■□□□ 1.58
TRAF4-207ENST00000461195 ZNF623O75123 536 aa24.94■■□□□ 1.58
TRAF4-207ENST00000461195 HOXA11P31270 313 aaPredicted RBP24.94■■□□□ 1.58
TRAF4-207ENST00000461195 MRPS5P82675 430 aaKnown RBP24.94■■□□□ 1.58
TRAF4-207ENST00000461195 TIGD5Q53EQ6 642 aa24.94■■□□□ 1.58
TRAF4-207ENST00000461195 CLLU1OSQ5K130 101 aa24.94■■□□□ 1.58
TRAF4-207ENST00000461195 MMTAG2Q9BU76 263 aaKnown RBP24.94■■□□□ 1.58
TRAF4-207ENST00000461195 PLAGL2Q9UPG8 496 aa24.94■■□□□ 1.58
TRAF4-207ENST00000461195 EYA4O95677 639 aa24.93■■□□□ 1.58
TRAF4-207ENST00000461195 AXLP30530 894 aa24.93■■□□□ 1.58
TRAF4-207ENST00000461195 MBTD1Q05BQ5 628 aa24.93■■□□□ 1.58
TRAF4-207ENST00000461195 NCBP1Q09161 790 aaKnown RBP24.93■■□□□ 1.58
TRAF4-207ENST00000461195 HSCBQ8IWL3 235 aa24.93■■□□□ 1.58
TRAF4-207ENST00000461195 LRRC43Q8N309 656 aa24.93■■□□□ 1.58
TRAF4-207ENST00000461195 KLHL23Q8NBE8 558 aa24.93■■□□□ 1.58
TRAF4-207ENST00000461195 HELQQ8TDG4 1101 aa24.93■■□□□ 1.58
TRAF4-207ENST00000461195 ADAMTS19Q8TE59 1207 aa24.93■■□□□ 1.58
TRAF4-207ENST00000461195 CWH43Q9H720 699 aa24.93■■□□□ 1.58
TRAF4-207ENST00000461195 ALG13Q9NP73 1137 aaKnown RBP24.93■■□□□ 1.58
TRAF4-207ENST00000461195 HCSTQ9UBK5 93 aa24.93■■□□□ 1.58
TRAF4-207ENST00000461195 BDP1A6H8Y1 2624 aa24.93■■□□□ 1.58
TRAF4-207ENST00000461195 ATG2AQ2TAZ0 1938 aa24.92■■□□□ 1.58
TRAF4-207ENST00000461195 LRRIQ4A6NIV6 560 aa24.92■■□□□ 1.58
TRAF4-207ENST00000461195 TSPAN1O60635 241 aa24.92■■□□□ 1.58
TRAF4-207ENST00000461195 ITGB1P05556 798 aa24.92■■□□□ 1.58
TRAF4-207ENST00000461195 LAG3P18627 525 aa24.92■■□□□ 1.58
TRAF4-207ENST00000461195 CSPP1Q1MSJ5 1256 aa24.92■■□□□ 1.58
TRAF4-207ENST00000461195 LRRC55Q6ZSA7 311 aa24.92■■□□□ 1.58
TRAF4-207ENST00000461195 COLGALT1Q8NBJ5 622 aa24.92■■□□□ 1.58
TRAF4-207ENST00000461195 RSPH1Q8WYR4 309 aa24.92■■□□□ 1.58
TRAF4-207ENST00000461195 PGBD4Q96DM1 585 aa24.92■■□□□ 1.58
TRAF4-207ENST00000461195 COG5Q9UP83 839 aa24.92■■□□□ 1.58
TRAF4-207ENST00000461195 PCDHB2Q9Y5E7 798 aa24.92■■□□□ 1.58
TRAF4-207ENST00000461195 E9PMD0 336 aa24.91■■□□□ 1.58
TRAF4-207ENST00000461195 RESTQ13127 1097 aa24.91■■□□□ 1.58
TRAF4-207ENST00000461195 SF3A1Q15459 793 aaKnown RBP24.91■■□□□ 1.58
TRAF4-207ENST00000461195 ZRSR1Q15695 479 aaKnown RBP24.91■■□□□ 1.58
TRAF4-207ENST00000461195 HYIQ5T013 277 aa24.91■■□□□ 1.58
TRAF4-207ENST00000461195 NOTUMQ6P988 496 aa24.91■■□□□ 1.58
TRAF4-207ENST00000461195 SPPL3Q8TCT6 385 aa24.91■■□□□ 1.58
TRAF4-207ENST00000461195 LPPQ93052 612 aa24.91■■□□□ 1.58
TRAF4-207ENST00000461195 CCDC51Q96ER9 411 aa24.91■■□□□ 1.58
TRAF4-207ENST00000461195 AK8Q96MA6 479 aa24.91■■□□□ 1.58
TRAF4-207ENST00000461195 MRPL9Q9BYD2 267 aaKnown RBP24.91■■□□□ 1.58
TRAF4-207ENST00000461195 NSUN3Q9H649 340 aaKnown RBP24.91■■□□□ 1.58
TRAF4-207ENST00000461195 PLXNA4Q9HCM2 1894 aa24.91■■□□□ 1.58
TRAF4-207ENST00000461195 COL9A1P20849 921 aa24.9■■□□□ 1.58
TRAF4-207ENST00000461195 PPP2R5AQ15172 486 aa24.9■■□□□ 1.58
TRAF4-207ENST00000461195 AMHR2Q16671 573 aa24.9■■□□□ 1.58
TRAF4-207ENST00000461195 LONRF3Q496Y0 759 aa24.9■■□□□ 1.58
TRAF4-207ENST00000461195 UBXN11Q5T124 520 aa24.9■■□□□ 1.58
TRAF4-207ENST00000461195 CDCA2Q69YH5 1023 aaPredicted RBP24.9■■□□□ 1.58
TRAF4-207ENST00000461195 GLB1LQ6UWU2 654 aa24.9■■□□□ 1.58
TRAF4-207ENST00000461195 ZBTB8OSQ8IWT0 167 aa24.9■■□□□ 1.58
TRAF4-207ENST00000461195 KCTD17Q8N5Z5 321 aa24.9■■□□□ 1.58
TRAF4-207ENST00000461195 KIFAP3Q92845 792 aa24.9■■□□□ 1.58
TRAF4-207ENST00000461195 HLA-CQ95604 372 aa24.9■■□□□ 1.58
TRAF4-207ENST00000461195 NT5C3AQ9H0P0 336 aa24.9■■□□□ 1.58
TRAF4-207ENST00000461195 C2orf40Q9H1Z8 148 aa24.9■■□□□ 1.58
TRAF4-207ENST00000461195 MTMR6Q9Y217 621 aa24.9■■□□□ 1.58
TRAF4-207ENST00000461195 NAMPTP43490 491 aa24.89■■□□□ 1.58
TRAF4-207ENST00000461195 KCNK18Q7Z418 384 aa24.89■■□□□ 1.58
TRAF4-207ENST00000461195 MRPL10Q7Z7H8 261 aaKnown RBP24.89■■□□□ 1.58
TRAF4-207ENST00000461195 THNSL1Q8IYQ7 743 aa24.89■■□□□ 1.58
TRAF4-207ENST00000461195 CNNM3Q8NE01 707 aa24.89■■□□□ 1.58
TRAF4-207ENST00000461195 BSNDQ8WZ55 320 aa24.89■■□□□ 1.58
TRAF4-207ENST00000461195 CPB2Q96IY4 423 aa24.89■■□□□ 1.58
TRAF4-207ENST00000461195 CDK5RAP3Q96JB5 506 aa24.89■■□□□ 1.58
TRAF4-207ENST00000461195 IFT74Q96LB3 600 aa24.89■■□□□ 1.58
TRAF4-207ENST00000461195 UHRF1Q96T88 793 aaPredicted RBP24.89■■□□□ 1.58
TRAF4-207ENST00000461195 MEIS3P2A8K0S8 358 aa24.88■■□□□ 1.57
TRAF4-207ENST00000461195 STX6O43752 255 aa24.88■■□□□ 1.57
TRAF4-207ENST00000461195 ARF4P18085 180 aaPredicted RBP24.88■■□□□ 1.57
TRAF4-207ENST00000461195 AAK1Q2M2I8 961 aa24.88■■□□□ 1.57
TRAF4-207ENST00000461195 TCEAL5Q5H9L2 206 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms