RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 KREMEN2Q8NCW0 462 aa13.96□□□□□ -0.17
HDAC4-207ENST00000461113 SNX29Q8TEQ0 813 aa13.96□□□□□ -0.17
HDAC4-207ENST00000461113 P2RX5Q93086 422 aa13.96□□□□□ -0.17
HDAC4-207ENST00000461113 NACC1Q96RE7 527 aa13.96□□□□□ -0.17
HDAC4-207ENST00000461113 POLR3CQ9BUI4 534 aaPredicted RBP13.96□□□□□ -0.17
HDAC4-207ENST00000461113 RGL1Q9NZL6 768 aa13.96□□□□□ -0.17
HDAC4-207ENST00000461113 PCDHGC5Q9Y5F6 944 aa13.96□□□□□ -0.17
HDAC4-207ENST00000461113 CLIC4Q9Y696 253 aa13.96□□□□□ -0.17
HDAC4-207ENST00000461113 KDM3AQ9Y4C1 1321 aa13.95□□□□□ -0.18
HDAC4-207ENST00000461113 SLC26A4O43511 780 aa13.95□□□□□ -0.18
HDAC4-207ENST00000461113 SLITRK3O94933 977 aa13.95□□□□□ -0.18
HDAC4-207ENST00000461113 XRCC6P12956 609 aaKnown RBP eCLIP13.95□□□□□ -0.18
HDAC4-207ENST00000461113 SP100P23497 879 aaPredicted RBP13.95□□□□□ -0.18
HDAC4-207ENST00000461113 KLRC1P26715 233 aa13.95□□□□□ -0.18
HDAC4-207ENST00000461113 RPA1P27694 616 aa13.95□□□□□ -0.18
HDAC4-207ENST00000461113 YWHABP31946 246 aaKnown RBP13.95□□□□□ -0.18
HDAC4-207ENST00000461113 KRT85P78386 507 aa13.95□□□□□ -0.18
HDAC4-207ENST00000461113 RBM10P98175 930 aaKnown RBP13.95□□□□□ -0.18
HDAC4-207ENST00000461113 ZRSR1Q15695 479 aaKnown RBP13.95□□□□□ -0.18
HDAC4-207ENST00000461113 UGCGQ16739 394 aa13.95□□□□□ -0.18
HDAC4-207ENST00000461113 MTERF2Q49AM1 385 aa13.95□□□□□ -0.18
HDAC4-207ENST00000461113 ZNF710Q8N1W2 664 aa13.95□□□□□ -0.18
HDAC4-207ENST00000461113 NME8Q8N427 588 aa13.95□□□□□ -0.18
HDAC4-207ENST00000461113 METTL13Q8N6R0 699 aa13.95□□□□□ -0.18
HDAC4-207ENST00000461113 KLHL23Q8NBE8 558 aa13.95□□□□□ -0.18
HDAC4-207ENST00000461113 POF1BQ8WVV4 589 aa13.95□□□□□ -0.18
HDAC4-207ENST00000461113 ZNF689Q96CS4 500 aaPredicted RBP13.95□□□□□ -0.18
HDAC4-207ENST00000461113 CALML4Q96GE6 196 aa13.95□□□□□ -0.18
HDAC4-207ENST00000461113 CEP170P1Q96L14 293 aa13.95□□□□□ -0.18
HDAC4-207ENST00000461113 USP28Q96RU2 1077 aa13.95□□□□□ -0.18
HDAC4-207ENST00000461113 MAP7D2Q96T17 732 aa13.95□□□□□ -0.18
HDAC4-207ENST00000461113 HSD17B14Q9BPX1 270 aa13.95□□□□□ -0.18
HDAC4-207ENST00000461113 NIFKQ9BYG3 293 aaKnown RBP13.95□□□□□ -0.18
HDAC4-207ENST00000461113 TLE6Q9H808 572 aa13.95□□□□□ -0.18
HDAC4-207ENST00000461113 ANKEF1Q9NU02 776 aa13.95□□□□□ -0.18
HDAC4-207ENST00000461113 TFIP11Q9UBB9 837 aaKnown RBP13.95□□□□□ -0.18
HDAC4-207ENST00000461113 CIZ1Q9ULV3 898 aaPredicted RBP13.95□□□□□ -0.18
HDAC4-207ENST00000461113 PCDHA2Q9Y5H9 948 aa13.95□□□□□ -0.18
HDAC4-207ENST00000461113 MRPL42Q9Y6G3 142 aaKnown RBP13.95□□□□□ -0.18
HDAC4-207ENST00000461113 EPG5Q9HCE0 2579 aa13.95□□□□□ -0.18
HDAC4-207ENST00000461113 VPS13AQ96RL7 3174 aa13.94□□□□□ -0.18
HDAC4-207ENST00000461113 PER2O15055 1255 aa13.94□□□□□ -0.18
HDAC4-207ENST00000461113 SPTLC2O15270 562 aa13.94□□□□□ -0.18
HDAC4-207ENST00000461113 ZNF862O60290 1169 aa13.94□□□□□ -0.18
HDAC4-207ENST00000461113 LYPLA2O95372 231 aa13.94□□□□□ -0.18
HDAC4-207ENST00000461113 YEATS4O95619 227 aa13.94□□□□□ -0.18
HDAC4-207ENST00000461113 ATP4AP20648 1035 aa13.94□□□□□ -0.18
HDAC4-207ENST00000461113 MARCKSP29966 332 aaPredicted RBP13.94□□□□□ -0.18
HDAC4-207ENST00000461113 HOXC8P31273 242 aa13.94□□□□□ -0.18
HDAC4-207ENST00000461113 SLC39A14Q15043 492 aa13.94□□□□□ -0.18
HDAC4-207ENST00000461113 NAALADL2Q58DX5 795 aa13.94□□□□□ -0.18
HDAC4-207ENST00000461113 XKR9Q5GH70 373 aa13.94□□□□□ -0.18
HDAC4-207ENST00000461113 IER5Q5VY09 327 aa13.94□□□□□ -0.18
HDAC4-207ENST00000461113 ASTLQ6HA08 431 aaPredicted RBP13.94□□□□□ -0.18
HDAC4-207ENST00000461113 MTHFD1LQ6UB35 978 aa13.94□□□□□ -0.18
HDAC4-207ENST00000461113 KCTD17Q8N5Z5 321 aa13.94□□□□□ -0.18
HDAC4-207ENST00000461113 IGSF22Q8N9C0 903 aa13.94□□□□□ -0.18
HDAC4-207ENST00000461113 KRI1Q8N9T8 703 aaKnown RBP13.94□□□□□ -0.18
HDAC4-207ENST00000461113 VN1R2Q8NFZ6 395 aa13.94□□□□□ -0.18
HDAC4-207ENST00000461113 KCNG4Q8TDN1 519 aa13.94□□□□□ -0.18
HDAC4-207ENST00000461113 SLC7A3Q8WY07 619 aa13.94□□□□□ -0.18
HDAC4-207ENST00000461113 NT5C3AQ9H0P0 336 aa13.94□□□□□ -0.18
HDAC4-207ENST00000461113 DNM3Q9UQ16 869 aa13.94□□□□□ -0.18
HDAC4-207ENST00000461113 ZFHX4Q86UP3 3567 aa13.93□□□□□ -0.18
HDAC4-207ENST00000461113 NCOR2Q9Y618 2525 aa13.93□□□□□ -0.18
HDAC4-207ENST00000461113 SMIM35A0A1B0GVV1 85 aa13.93□□□□□ -0.18
HDAC4-207ENST00000461113 MBLAC1A4D2B0 266 aaPredicted RBP13.93□□□□□ -0.18
HDAC4-207ENST00000461113 ENPP3O14638 875 aa13.93□□□□□ -0.18
HDAC4-207ENST00000461113 DGKIO75912 1065 aa13.93□□□□□ -0.18
HDAC4-207ENST00000461113 RFC5P40937 340 aa13.93□□□□□ -0.18
HDAC4-207ENST00000461113 NASPP49321 788 aaPredicted RBP13.93□□□□□ -0.18
HDAC4-207ENST00000461113 POLGP54098 1239 aaPredicted RBP13.93□□□□□ -0.18
HDAC4-207ENST00000461113 CDC42EP1Q00587 391 aa13.93□□□□□ -0.18
HDAC4-207ENST00000461113 PKP1Q13835 747 aa13.93□□□□□ -0.18
HDAC4-207ENST00000461113 CATSPER3Q86XQ3 398 aa13.93□□□□□ -0.18
HDAC4-207ENST00000461113 UBALD2Q8IYN6 164 aa13.93□□□□□ -0.18
HDAC4-207ENST00000461113 TRAPPC12Q8WVT3 735 aa13.93□□□□□ -0.18
HDAC4-207ENST00000461113 FAM49AQ9H0Q0 323 aaPredicted RBP13.93□□□□□ -0.18
HDAC4-207ENST00000461113 CYP26B1Q9NR63 512 aa13.93□□□□□ -0.18
HDAC4-207ENST00000461113 CCDC39Q9UFE4 941 aa13.93□□□□□ -0.18
HDAC4-207ENST00000461113 RBM19Q9Y4C8 960 aaKnown RBP13.93□□□□□ -0.18
HDAC4-207ENST00000461113 SRPRBQ9Y5M8 271 aaKnown RBP13.93□□□□□ -0.18
HDAC4-207ENST00000461113 MORC2Q9Y6X9 1032 aaPredicted RBP13.93□□□□□ -0.18
HDAC4-207ENST00000461113 ATG2AQ2TAZ0 1938 aa13.92□□□□□ -0.18
HDAC4-207ENST00000461113 ARHGEF35A5YM69 484 aa13.92□□□□□ -0.18
HDAC4-207ENST00000461113 GAS2O43903 313 aaKnown RBP13.92□□□□□ -0.18
HDAC4-207ENST00000461113 PPP6R2O75170 966 aa13.92□□□□□ -0.18
HDAC4-207ENST00000461113 GHRP10912 638 aa13.92□□□□□ -0.18
HDAC4-207ENST00000461113 ME1P48163 572 aa13.92□□□□□ -0.18
HDAC4-207ENST00000461113 ADAM17P78536 824 aa13.92□□□□□ -0.18
HDAC4-207ENST00000461113 DNM1Q05193 864 aaKnown RBP13.92□□□□□ -0.18
HDAC4-207ENST00000461113 MTMR3Q13615 1198 aa13.92□□□□□ -0.18
HDAC4-207ENST00000461113 PTPAQ15257 358 aa13.92□□□□□ -0.18
HDAC4-207ENST00000461113 FAM26DQ5JW98 314 aa13.92□□□□□ -0.18
HDAC4-207ENST00000461113 EFCAB12Q6NXP0 572 aa13.92□□□□□ -0.18
HDAC4-207ENST00000461113 CABP7Q86V35 215 aa13.92□□□□□ -0.18
HDAC4-207ENST00000461113 KIAA2013Q8IYS2 634 aa13.92□□□□□ -0.18
HDAC4-207ENST00000461113 LINC00301Q8NCQ3 95 aa13.92□□□□□ -0.18
HDAC4-207ENST00000461113 MICAL1Q8TDZ2 1067 aa13.92□□□□□ -0.18
HDAC4-207ENST00000461113 DNAJB3Q8WWF6 145 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms