RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 MROH8Q9H579 483 aa6.49□□□□□ -1.37
PTPN12-209ENST00000460731 BARHL2Q9NY43 387 aa6.49□□□□□ -1.37
PTPN12-209ENST00000460731 RAPGEFL1Q9UHV5 662 aa6.49□□□□□ -1.37
PTPN12-209ENST00000460731 GJD2Q9UKL4 321 aa6.49□□□□□ -1.37
PTPN12-209ENST00000460731 RIPK3Q9Y572 518 aa6.49□□□□□ -1.37
PTPN12-209ENST00000460731 SNX11Q9Y5W9 270 aa6.49□□□□□ -1.37
PTPN12-209ENST00000460731 HTTP42858 3142 aa6.49□□□□□ -1.37
PTPN12-209ENST00000460731 LOC102724159A0A0B4J2E5 919 aa6.48□□□□□ -1.37
PTPN12-209ENST00000460731 STXBP3O00186 592 aa6.48□□□□□ -1.37
PTPN12-209ENST00000460731 DEXIO95424 95 aa6.48□□□□□ -1.37
PTPN12-209ENST00000460731 KRT1P04264 644 aa6.48□□□□□ -1.37
PTPN12-209ENST00000460731 HOXC6P09630 235 aa6.48□□□□□ -1.37
PTPN12-209ENST00000460731 SCG2P13521 617 aa6.48□□□□□ -1.37
PTPN12-209ENST00000460731 PDIA4P13667 645 aaKnown RBP6.48□□□□□ -1.37
PTPN12-209ENST00000460731 CTGFP29279 349 aa6.48□□□□□ -1.37
PTPN12-209ENST00000460731 DDIT3P35638 169 aa6.48□□□□□ -1.37
PTPN12-209ENST00000460731 HSD17B4P51659 736 aa6.48□□□□□ -1.37
PTPN12-209ENST00000460731 CCNA1P78396 465 aa6.48□□□□□ -1.37
PTPN12-209ENST00000460731 HMGN5P82970 282 aaKnown RBP6.48□□□□□ -1.37
PTPN12-209ENST00000460731 CAP1Q01518 475 aa6.48□□□□□ -1.37
PTPN12-209ENST00000460731 SSRP1Q08945 709 aaKnown RBP6.48□□□□□ -1.37
PTPN12-209ENST00000460731 PWP2Q15269 919 aaKnown RBP6.48□□□□□ -1.37
PTPN12-209ENST00000460731 CDC37Q16543 378 aaPredicted RBP6.48□□□□□ -1.37
PTPN12-209ENST00000460731 MLANAQ16655 118 aa6.48□□□□□ -1.37
PTPN12-209ENST00000460731 GALNT17Q6IS24 598 aa6.48□□□□□ -1.37
PTPN12-209ENST00000460731 CPLX2Q6PUV4 134 aaKnown RBP6.48□□□□□ -1.37
PTPN12-209ENST00000460731 FAM214BQ7L5A3 538 aa6.48□□□□□ -1.37
PTPN12-209ENST00000460731 RAB11FIP4Q86YS3 637 aa6.48□□□□□ -1.37
PTPN12-209ENST00000460731 CCDC144CPQ8IYA2 1237 aa6.48□□□□□ -1.37
PTPN12-209ENST00000460731 LRRC56Q8IYG6 542 aaPredicted RBP6.48□□□□□ -1.37
PTPN12-209ENST00000460731 SMYD4Q8IYR2 804 aaPredicted RBP6.48□□□□□ -1.37
PTPN12-209ENST00000460731 ANKRD13CQ8N6S4 541 aa6.48□□□□□ -1.37
PTPN12-209ENST00000460731 PHKBQ93100 1093 aa6.48□□□□□ -1.37
PTPN12-209ENST00000460731 CCDC86Q9H6F5 360 aaKnown RBP6.48□□□□□ -1.37
PTPN12-209ENST00000460731 FBXO40Q9UH90 709 aa6.48□□□□□ -1.37
PTPN12-209ENST00000460731 PCDHA1Q9Y5I3 950 aa6.48□□□□□ -1.37
PTPN12-209ENST00000460731 COL11A1P12107 1806 aaPredicted RBP6.48□□□□□ -1.37
PTPN12-209ENST00000460731 ABCB11O95342 1321 aa6.48□□□□□ -1.37
PTPN12-209ENST00000460731 MYH6P13533 1939 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 ZNFX1Q9P2E3 1918 aaKnown RBP6.47□□□□□ -1.37
PTPN12-209ENST00000460731 PTPDC1A2A3K4 754 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 SLC15A5A6NIM6 579 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 MEIS2O14770 477 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 CPLX1O14810 134 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 ZNF862O60290 1169 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 JAK2O60674 1132 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 PEX10O60683 326 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 FAM13AO94988 1023 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 TBC1D8O95759 1140 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 XRCC5P13010 732 aaKnown RBP6.47□□□□□ -1.37
PTPN12-209ENST00000460731 LIG1P18858 919 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 ERCC3P19447 782 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 MAPK4P31152 587 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 LACTBP83111 547 aaPredicted RBP6.47□□□□□ -1.37
PTPN12-209ENST00000460731 SP3Q02447 781 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 ID3Q02535 119 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 STK3Q13188 491 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 WWC2Q6AWC2 1192 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 TTLL10Q6ZVT0 673 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 CCDC83Q8IWF9 413 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 CCDC82Q8N4S0 544 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 FAM133AQ8N9E0 248 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 DAGLBQ8NCG7 672 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 FBXO18Q8NFZ0 1043 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 MORC4Q8TE76 937 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 SMCR8Q8TEV9 937 aaPredicted RBP6.47□□□□□ -1.37
PTPN12-209ENST00000460731 CRYGNQ8WXF5 182 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 WASF1Q92558 559 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 PPP1R16BQ96T49 567 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 PHF20Q9BVI0 1012 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 GLT8D2Q9H1C3 349 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 PORCNQ9H237 461 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 RAVER2Q9HCJ3 691 aaKnown RBP6.47□□□□□ -1.37
PTPN12-209ENST00000460731 VAT1LQ9HCJ6 419 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 RIC8AQ9NPQ8 531 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 ORC3Q9UBD5 711 aaPredicted RBP6.47□□□□□ -1.37
PTPN12-209ENST00000460731 CPA4Q9UI42 421 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 CTNND2Q9UQB3 1225 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 MTMR7Q9Y216 660 aa6.47□□□□□ -1.37
PTPN12-209ENST00000460731 DIS3Q9Y2L1 958 aaKnown RBP6.47□□□□□ -1.37
PTPN12-209ENST00000460731 MRPL11Q9Y3B7 192 aaKnown RBP6.47□□□□□ -1.37
PTPN12-209ENST00000460731 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.47□□□□□ -1.37
PTPN12-209ENST00000460731 EDIL3O43854 480 aa6.46□□□□□ -1.38
PTPN12-209ENST00000460731 FKTNO75072 461 aa6.46□□□□□ -1.38
PTPN12-209ENST00000460731 U2AF2P26368 475 aaKnown RBP eCLIP6.46□□□□□ -1.387e-8■■■■□ 23.7
PTPN12-209ENST00000460731 SNAP25P60880 206 aa6.46□□□□□ -1.38
PTPN12-209ENST00000460731 IKQ13123 557 aaPredicted RBP6.46□□□□□ -1.38
PTPN12-209ENST00000460731 GRM1Q13255 1194 aa6.46□□□□□ -1.38
PTPN12-209ENST00000460731 GRB14Q14449 540 aa6.46□□□□□ -1.38
PTPN12-209ENST00000460731 KCNMB1Q16558 191 aa6.46□□□□□ -1.38
PTPN12-209ENST00000460731 MUM1L1Q5H9M0 696 aa6.46□□□□□ -1.38
PTPN12-209ENST00000460731 MCTP2Q6DN12 878 aa6.46□□□□□ -1.38
PTPN12-209ENST00000460731 SNRNP48Q6IEG0 339 aaKnown RBP6.46□□□□□ -1.38
PTPN12-209ENST00000460731 MAMDC4Q6UXC1 1216 aa6.46□□□□□ -1.38
PTPN12-209ENST00000460731 MCF2L2Q86YR7 1114 aa6.46□□□□□ -1.38
PTPN12-209ENST00000460731 ZSCAN18Q8TBC5 510 aaPredicted RBP6.46□□□□□ -1.38
PTPN12-209ENST00000460731 TBC1D5Q92609 795 aa6.46□□□□□ -1.38
PTPN12-209ENST00000460731 COA7Q96BR5 231 aa6.46□□□□□ -1.38
PTPN12-209ENST00000460731 LIN37Q96GY3 246 aaPredicted RBP6.46□□□□□ -1.38
PTPN12-209ENST00000460731 FGD4Q96M96 766 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms