RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 MRPS27Q92552 414 aaKnown RBP12□□□□□ -0.49
CCDC12-204ENST00000460035 PYM1Q9BRP8 204 aaKnown RBP12□□□□□ -0.49
CCDC12-204ENST00000460035 FTHL17Q9BXU8 183 aa12□□□□□ -0.49
CCDC12-204ENST00000460035 NFKBIZQ9BYH8 718 aa12□□□□□ -0.49
CCDC12-204ENST00000460035 LRRC27Q9C0I9 530 aa12□□□□□ -0.49
CCDC12-204ENST00000460035 TMX1Q9H3N1 280 aa12□□□□□ -0.49
CCDC12-204ENST00000460035 MINDY3Q9H8M7 445 aa12□□□□□ -0.49
CCDC12-204ENST00000460035 KMT5AQ9NQR1 393 aa12□□□□□ -0.49
CCDC12-204ENST00000460035 SERTAD1Q9UHV2 236 aa12□□□□□ -0.49
CCDC12-204ENST00000460035 DENND3A2RUS2 1198 aa11.99□□□□□ -0.49
CCDC12-204ENST00000460035 MYMKA6NI61 221 aa11.99□□□□□ -0.49
CCDC12-204ENST00000460035 ERLIN2O94905 339 aa11.99□□□□□ -0.49
CCDC12-204ENST00000460035 AMHP03971 560 aa11.99□□□□□ -0.49
CCDC12-204ENST00000460035 PLS3P13797 630 aa11.99□□□□□ -0.49
CCDC12-204ENST00000460035 NAMPTP43490 491 aa11.99□□□□□ -0.49
CCDC12-204ENST00000460035 NDUFA8P51970 172 aa11.99□□□□□ -0.49
CCDC12-204ENST00000460035 SMTNP53814 917 aa11.99□□□□□ -0.49
CCDC12-204ENST00000460035 WDR5P61964 334 aaKnown RBP11.99□□□□□ -0.49
CCDC12-204ENST00000460035 NCBP1Q09161 790 aaKnown RBP11.99□□□□□ -0.49
CCDC12-204ENST00000460035 DMP1Q13316 513 aaPredicted RBP11.99□□□□□ -0.49
CCDC12-204ENST00000460035 PCBP1Q15365 356 aaKnown RBP eCLIP11.99□□□□□ -0.49
CCDC12-204ENST00000460035 TMEM132AQ24JP5 1023 aa11.99□□□□□ -0.49
CCDC12-204ENST00000460035 CDCA2Q69YH5 1023 aaPredicted RBP11.99□□□□□ -0.49
CCDC12-204ENST00000460035 FAM117BQ6P1L5 589 aa11.99□□□□□ -0.49
CCDC12-204ENST00000460035 CLEC17AQ6ZS10 378 aa11.99□□□□□ -0.49
CCDC12-204ENST00000460035 RTN4RL1Q86UN2 441 aaPredicted RBP11.99□□□□□ -0.49
CCDC12-204ENST00000460035 TMEM87AQ8NBN3 555 aa11.99□□□□□ -0.49
CCDC12-204ENST00000460035 DDX12PQ92771 950 aa11.99□□□□□ -0.49
CCDC12-204ENST00000460035 ADAM2Q99965 735 aa11.99□□□□□ -0.49
CCDC12-204ENST00000460035 REEP2Q9BRK0 252 aa11.99□□□□□ -0.49
CCDC12-204ENST00000460035 C2orf40Q9H1Z8 148 aa11.99□□□□□ -0.49
CCDC12-204ENST00000460035 C17orf75Q9HAS0 396 aa11.99□□□□□ -0.49
CCDC12-204ENST00000460035 MAGEF1Q9HAY2 307 aa11.99□□□□□ -0.49
CCDC12-204ENST00000460035 KCNG1Q9UIX4 513 aa11.99□□□□□ -0.49
CCDC12-204ENST00000460035 ODF2LQ9ULJ1 636 aa11.99□□□□□ -0.49
CCDC12-204ENST00000460035 HPSEQ9Y251 543 aa11.99□□□□□ -0.49
CCDC12-204ENST00000460035 ANK1P16157 1881 aa11.99□□□□□ -0.49
CCDC12-204ENST00000460035 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.98□□□□□ -0.49
CCDC12-204ENST00000460035 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.98□□□□□ -0.49
CCDC12-204ENST00000460035 GRXCR1A8MXD5 290 aa11.98□□□□□ -0.49
CCDC12-204ENST00000460035 K7ERI5 159 aa11.98□□□□□ -0.49
CCDC12-204ENST00000460035 SLC16A4O15374 487 aa11.98□□□□□ -0.49
CCDC12-204ENST00000460035 UPP2O95045 317 aa11.98□□□□□ -0.49
CCDC12-204ENST00000460035 IDEP14735 1019 aa11.98□□□□□ -0.49
CCDC12-204ENST00000460035 ATP2A2P16615 1042 aaKnown RBP11.98□□□□□ -0.49
CCDC12-204ENST00000460035 AFMP43652 599 aa11.98□□□□□ -0.49
CCDC12-204ENST00000460035 NPTX2P47972 431 aa11.98□□□□□ -0.49
CCDC12-204ENST00000460035 DEFB103AP81534 67 aa11.98□□□□□ -0.49
CCDC12-204ENST00000460035 MAPK6Q16659 721 aa11.98□□□□□ -0.49
CCDC12-204ENST00000460035 MYOCDQ8IZQ8 938 aa11.98□□□□□ -0.49
CCDC12-204ENST00000460035 ZBED2Q9BTP6 218 aa11.98□□□□□ -0.49
CCDC12-204ENST00000460035 KIFC3Q9BVG8 833 aa11.98□□□□□ -0.49
CCDC12-204ENST00000460035 TNMDQ9H2S6 317 aa11.98□□□□□ -0.49
CCDC12-204ENST00000460035 GOLPH3LQ9H4A5 285 aa11.98□□□□□ -0.49
CCDC12-204ENST00000460035 PARVGQ9HBI0 331 aa11.98□□□□□ -0.49
CCDC12-204ENST00000460035 KBTBD4Q9NVX7 518 aa11.98□□□□□ -0.49
CCDC12-204ENST00000460035 LARSQ9P2J5 1176 aaKnown RBP11.98□□□□□ -0.49
CCDC12-204ENST00000460035 USP25Q9UHP3 1055 aa11.98□□□□□ -0.49
CCDC12-204ENST00000460035 PIN4Q9Y237 131 aaKnown RBP11.98□□□□□ -0.49
CCDC12-204ENST00000460035 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.97□□□□□ -0.49
CCDC12-204ENST00000460035 MGEA5O60502 916 aa11.97□□□□□ -0.49
CCDC12-204ENST00000460035 GADD45BO75293 160 aaPredicted RBP11.97□□□□□ -0.49
CCDC12-204ENST00000460035 PRPF40AO75400 957 aaKnown RBP11.97□□□□□ -0.49
CCDC12-204ENST00000460035 ZNF202O95125 648 aa11.97□□□□□ -0.49
CCDC12-204ENST00000460035 SLFN14P0C7P3 912 aa11.97□□□□□ -0.49
CCDC12-204ENST00000460035 ZNF131P52739 623 aa11.97□□□□□ -0.49
CCDC12-204ENST00000460035 EFNA5P52803 228 aa11.97□□□□□ -0.49
CCDC12-204ENST00000460035 MBTD1Q05BQ5 628 aa11.97□□□□□ -0.49
CCDC12-204ENST00000460035 DSC3Q14574 896 aa11.97□□□□□ -0.49
CCDC12-204ENST00000460035 LONRF3Q496Y0 759 aa11.97□□□□□ -0.49
CCDC12-204ENST00000460035 HERC4Q5GLZ8 1057 aaPredicted RBP11.97□□□□□ -0.49
CCDC12-204ENST00000460035 TWF2Q6IBS0 349 aaKnown RBP11.97□□□□□ -0.49
CCDC12-204ENST00000460035 CNNM4Q6P4Q7 775 aa11.97□□□□□ -0.49
CCDC12-204ENST00000460035 TMCO2Q7Z6W1 182 aaPredicted RBP11.97□□□□□ -0.49
CCDC12-204ENST00000460035 GRAMD1CQ8IYS0 662 aa11.97□□□□□ -0.49
CCDC12-204ENST00000460035 PHOSPHO2Q8TCD6 241 aa11.97□□□□□ -0.49
CCDC12-204ENST00000460035 SPIRE2Q8WWL2 714 aa11.97□□□□□ -0.49
CCDC12-204ENST00000460035 KCNN1Q92952 543 aa11.97□□□□□ -0.49
CCDC12-204ENST00000460035 SLC9A7Q96T83 725 aa11.97□□□□□ -0.49
CCDC12-204ENST00000460035 NTPCRQ9BSD7 190 aaKnown RBP11.97□□□□□ -0.49
CCDC12-204ENST00000460035 TSPYL2Q9H2G4 693 aaPredicted RBP11.97□□□□□ -0.49
CCDC12-204ENST00000460035 BLZF1Q9H2G9 400 aa11.97□□□□□ -0.49
CCDC12-204ENST00000460035 CHST12Q9NRB3 414 aa11.97□□□□□ -0.49
CCDC12-204ENST00000460035 RGS18Q9NS28 235 aa11.97□□□□□ -0.49
CCDC12-204ENST00000460035 PANK4Q9NVE7 773 aa11.97□□□□□ -0.49
CCDC12-204ENST00000460035 LRFN2Q9ULH4 789 aa11.97□□□□□ -0.49
CCDC12-204ENST00000460035 PCDHB7Q9Y5E2 793 aa11.97□□□□□ -0.49
CCDC12-204ENST00000460035 COL4A6Q14031 1691 aa11.97□□□□□ -0.49
CCDC12-204ENST00000460035 ADGRA3Q8IWK6 1321 aa11.96□□□□□ -0.49
CCDC12-204ENST00000460035 ACTN4O43707 911 aaKnown RBP11.96□□□□□ -0.49
CCDC12-204ENST00000460035 TRAK2O60296 914 aa11.96□□□□□ -0.49
CCDC12-204ENST00000460035 TSPAN1O60635 241 aa11.96□□□□□ -0.49
CCDC12-204ENST00000460035 PRKCBP05771 671 aa11.96□□□□□ -0.49
CCDC12-204ENST00000460035 GAP43P17677 238 aa11.96□□□□□ -0.49
CCDC12-204ENST00000460035 RABGGTBP53611 331 aa11.96□□□□□ -0.49
CCDC12-204ENST00000460035 ASIC1P78348 528 aa11.96□□□□□ -0.49
CCDC12-204ENST00000460035 STRN3Q13033 797 aa11.96□□□□□ -0.49
CCDC12-204ENST00000460035 PRPF4BQ13523 1007 aaKnown RBP11.96□□□□□ -0.49
CCDC12-204ENST00000460035 FAM187BQ17R55 369 aa11.96□□□□□ -0.49
CCDC12-204ENST00000460035 FAM109BQ6ICB4 259 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms