RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 PSMC5P62195 406 aa17.34■□□□□ 0.37
SDF4-204ENST00000459994 UBE2HP62256 183 aa17.34■□□□□ 0.37
SDF4-204ENST00000459994 FAM189BP81408 668 aa17.34■□□□□ 0.37
SDF4-204ENST00000459994 DLX2Q07687 328 aaPredicted RBP17.34■□□□□ 0.37
SDF4-204ENST00000459994 HYAL1Q12794 435 aa17.34■□□□□ 0.37
SDF4-204ENST00000459994 EPHA7Q15375 998 aa17.34■□□□□ 0.37
SDF4-204ENST00000459994 TIGD5Q53EQ6 642 aa17.34■□□□□ 0.37
SDF4-204ENST00000459994 RESP18Q5W5W9 173 aa17.34■□□□□ 0.37
SDF4-204ENST00000459994 SHC4Q6S5L8 630 aa17.34■□□□□ 0.37
SDF4-204ENST00000459994 LRRC55Q6ZSA7 311 aa17.34■□□□□ 0.37
SDF4-204ENST00000459994 ADGRD2Q7Z7M1 963 aa17.34■□□□□ 0.37
SDF4-204ENST00000459994 SPPL3Q8TCT6 385 aa17.34■□□□□ 0.37
SDF4-204ENST00000459994 DYDC2Q96IM9 177 aa17.34■□□□□ 0.37
SDF4-204ENST00000459994 FDXACB1Q9BRP7 624 aaPredicted RBP17.34■□□□□ 0.37
SDF4-204ENST00000459994 CCSER1Q9C0I3 900 aa17.34■□□□□ 0.37
SDF4-204ENST00000459994 CWH43Q9H720 699 aa17.34■□□□□ 0.37
SDF4-204ENST00000459994 C1orf112Q9NSG2 853 aa17.34■□□□□ 0.37
SDF4-204ENST00000459994 BMP2KQ9NSY1 1161 aaPredicted RBP17.34■□□□□ 0.37
SDF4-204ENST00000459994 LMBRD1Q9NUN5 540 aa17.34■□□□□ 0.37
SDF4-204ENST00000459994 FAM237AA0A1B0GTK4 181 aa17.33■□□□□ 0.36
SDF4-204ENST00000459994 MAFO75444 373 aaPredicted RBP17.33■□□□□ 0.36
SDF4-204ENST00000459994 ATF7P17544 494 aaPredicted RBP17.33■□□□□ 0.36
SDF4-204ENST00000459994 TMOD1P28289 359 aa17.33■□□□□ 0.36
SDF4-204ENST00000459994 CTTNQ14247 550 aaKnown RBP17.33■□□□□ 0.36
SDF4-204ENST00000459994 COL19A1Q14993 1142 aa17.33■□□□□ 0.36
SDF4-204ENST00000459994 LEXMQ3ZCV2 418 aa17.33■□□□□ 0.36
SDF4-204ENST00000459994 NCAPH2Q6IBW4 605 aa17.33■□□□□ 0.36
SDF4-204ENST00000459994 ERMNQ8TAM6 284 aa17.33■□□□□ 0.36
SDF4-204ENST00000459994 NEK9Q8TD19 979 aa17.33■□□□□ 0.36
SDF4-204ENST00000459994 NLRP7Q8WX94 980 aa17.33■□□□□ 0.36
SDF4-204ENST00000459994 TYW1Q9NV66 732 aaKnown RBP17.33■□□□□ 0.36
SDF4-204ENST00000459994 RWDD3Q9Y3V2 267 aa17.33■□□□□ 0.36
SDF4-204ENST00000459994 GADD45BO75293 160 aaPredicted RBP17.32■□□□□ 0.36
SDF4-204ENST00000459994 UBA7P41226 1012 aa17.32■□□□□ 0.36
SDF4-204ENST00000459994 QARSP47897 775 aaKnown RBP17.32■□□□□ 0.36
SDF4-204ENST00000459994 CYP4A11Q02928 519 aa17.32■□□□□ 0.36
SDF4-204ENST00000459994 KRT79Q5XKE5 535 aa17.32■□□□□ 0.36
SDF4-204ENST00000459994 EP400NLQ6ZTU2 488 aa17.32■□□□□ 0.36
SDF4-204ENST00000459994 ECHDC2Q86YB7 292 aa17.32■□□□□ 0.36
SDF4-204ENST00000459994 RHPN2Q8IUC4 686 aa17.32■□□□□ 0.36
SDF4-204ENST00000459994 POF1BQ8WVV4 589 aa17.32■□□□□ 0.36
SDF4-204ENST00000459994 P2RX5Q93086 422 aa17.32■□□□□ 0.36
SDF4-204ENST00000459994 SCLT1Q96NL6 688 aa17.32■□□□□ 0.36
SDF4-204ENST00000459994 CASD1Q96PB1 797 aa17.32■□□□□ 0.36
SDF4-204ENST00000459994 HSD17B14Q9BPX1 270 aa17.32■□□□□ 0.36
SDF4-204ENST00000459994 LXNQ9BS40 222 aa17.32■□□□□ 0.36
SDF4-204ENST00000459994 MMTAG2Q9BU76 263 aaKnown RBP17.32■□□□□ 0.36
SDF4-204ENST00000459994 POLR3CQ9BUI4 534 aaPredicted RBP17.32■□□□□ 0.36
SDF4-204ENST00000459994 PLVAPQ9BX97 442 aa17.32■□□□□ 0.36
SDF4-204ENST00000459994 CYP26B1Q9NR63 512 aa17.32■□□□□ 0.36
SDF4-204ENST00000459994 TMEM161AQ9NX61 479 aa17.32■□□□□ 0.36
SDF4-204ENST00000459994 CLDND1Q9NY35 253 aa17.32■□□□□ 0.36
SDF4-204ENST00000459994 FAM13BQ9NYF5 915 aa17.32■□□□□ 0.36
SDF4-204ENST00000459994 BDP1A6H8Y1 2624 aa17.31■□□□□ 0.36
SDF4-204ENST00000459994 A0A087WWV3 80 aa17.31■□□□□ 0.36
SDF4-204ENST00000459994 PP2D1A8MPX8 630 aa17.31■□□□□ 0.36
SDF4-204ENST00000459994 P4HBP07237 508 aaKnown RBP17.31■□□□□ 0.36
SDF4-204ENST00000459994 PTMSP20962 102 aa17.31■□□□□ 0.36
SDF4-204ENST00000459994 MUTP22033 750 aa17.31■□□□□ 0.36
SDF4-204ENST00000459994 TXLNAP40222 546 aa17.31■□□□□ 0.36
SDF4-204ENST00000459994 PBX3P40426 434 aa17.31■□□□□ 0.36
SDF4-204ENST00000459994 CLLU1OSQ5K130 101 aa17.31■□□□□ 0.36
SDF4-204ENST00000459994 SPECC1Q5M775 1068 aa17.31■□□□□ 0.36
SDF4-204ENST00000459994 ODR4Q5SWX8 454 aa17.31■□□□□ 0.36
SDF4-204ENST00000459994 HAUS3Q68CZ6 603 aa17.31■□□□□ 0.36
SDF4-204ENST00000459994 USP49Q70CQ1 688 aa17.31■□□□□ 0.36
SDF4-204ENST00000459994 CABP7Q86V35 215 aa17.31■□□□□ 0.36
SDF4-204ENST00000459994 KCTD17Q8N5Z5 321 aa17.31■□□□□ 0.36
SDF4-204ENST00000459994 COLGALT1Q8NBJ5 622 aa17.31■□□□□ 0.36
SDF4-204ENST00000459994 MRPS27Q92552 414 aaKnown RBP17.31■□□□□ 0.36
SDF4-204ENST00000459994 PABPC5Q96DU9 382 aaKnown RBP17.31■□□□□ 0.36
SDF4-204ENST00000459994 EPSTI1Q96J88 318 aa17.31■□□□□ 0.36
SDF4-204ENST00000459994 EIF2AK1Q9BQI3 630 aaKnown RBP17.31■□□□□ 0.36
SDF4-204ENST00000459994 LMAN2LQ9H0V9 348 aa17.31■□□□□ 0.36
SDF4-204ENST00000459994 IGFLR1Q9H665 355 aa17.31■□□□□ 0.36
SDF4-204ENST00000459994 SUCLA2Q9P2R7 463 aaPredicted RBP17.31■□□□□ 0.36
SDF4-204ENST00000459994 MEIS3P2A8K0S8 358 aa17.3■□□□□ 0.36
SDF4-204ENST00000459994 TBX10O75333 385 aa17.3■□□□□ 0.36
SDF4-204ENST00000459994 RPA1P27694 616 aa17.3■□□□□ 0.36
SDF4-204ENST00000459994 CDC25AP30304 524 aa17.3■□□□□ 0.36
SDF4-204ENST00000459994 CLUL1Q15846 466 aa17.3■□□□□ 0.36
SDF4-204ENST00000459994 CTC1Q2NKJ3 1217 aa17.3■□□□□ 0.36
SDF4-204ENST00000459994 LONRF3Q496Y0 759 aa17.3■□□□□ 0.36
SDF4-204ENST00000459994 HYIQ5T013 277 aa17.3■□□□□ 0.36
SDF4-204ENST00000459994 PTCRAQ6ISU1 281 aaPredicted RBP17.3■□□□□ 0.36
SDF4-204ENST00000459994 ZNF598Q86UK7 904 aaKnown RBP17.3■□□□□ 0.36
SDF4-204ENST00000459994 FSIP1Q8NA03 581 aa17.3■□□□□ 0.36
SDF4-204ENST00000459994 RNF169Q8NCN4 708 aa17.3■□□□□ 0.36
SDF4-204ENST00000459994 SNX29Q8TEQ0 813 aa17.3■□□□□ 0.36
SDF4-204ENST00000459994 TMEM143Q96AN5 459 aa17.3■□□□□ 0.36
SDF4-204ENST00000459994 NLRP4Q96MN2 994 aa17.3■□□□□ 0.36
SDF4-204ENST00000459994 ELAC1Q9H777 363 aaKnown RBP17.3■□□□□ 0.36
SDF4-204ENST00000459994 ATP6V0A4Q9HBG4 840 aa17.3■□□□□ 0.36
SDF4-204ENST00000459994 TUFT1Q9NNX1 390 aa17.3■□□□□ 0.36
SDF4-204ENST00000459994 HPSEQ9Y251 543 aa17.3■□□□□ 0.36
SDF4-204ENST00000459994 TDRD15B5MCY1 1934 aaKnown RBP17.29■□□□□ 0.36
SDF4-204ENST00000459994 GRXCR2A6NFK2 248 aa17.29■□□□□ 0.36
SDF4-204ENST00000459994 SLITRK3O94933 977 aa17.29■□□□□ 0.36
SDF4-204ENST00000459994 SPATA31C1P0DKV0 1188 aa17.29■□□□□ 0.36
SDF4-204ENST00000459994 CCT6AP40227 531 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms