RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 PLS3P13797 630 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 SFPQP23246 707 aaKnown RBP eCLIP9.83□□□□□ -0.84
VPS50-207ENST00000458530 STAT5BP51692 787 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 COPB1P53618 953 aaKnown RBP9.83□□□□□ -0.84
VPS50-207ENST00000458530 RTP1P59025 263 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 SNRPFP62306 86 aaKnown RBP9.83□□□□□ -0.84
VPS50-207ENST00000458530 PPP2R3AQ06190 1150 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 MAP2K5Q13163 448 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 DMP1Q13316 513 aaPredicted RBP9.83□□□□□ -0.84
VPS50-207ENST00000458530 LAMC2Q13753 1193 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 PPP2R5AQ15172 486 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 NFIL3Q16649 462 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 UGCGQ16739 394 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 TJAP1Q5JTD0 557 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 FKBP15Q5T1M5 1219 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 SPECC1LQ69YQ0 1117 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 ANKRD40Q6AI12 368 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 EPM2AIP1Q7L775 607 aaPredicted RBP9.83□□□□□ -0.84
VPS50-207ENST00000458530 EEPD1Q7L9B9 569 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 CCDC60Q8IWA6 550 aaPredicted RBP9.83□□□□□ -0.84
VPS50-207ENST00000458530 FBXO16Q8IX29 292 aaPredicted RBP9.83□□□□□ -0.84
VPS50-207ENST00000458530 CCDC112Q8NEF3 446 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 ZNF507Q8TCN5 953 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 HPS3Q969F9 1004 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 MAML3Q96JK9 1138 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 IFT74Q96LB3 600 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 CNOT6LQ96LI5 555 aaKnown RBP9.83□□□□□ -0.84
VPS50-207ENST00000458530 MED15Q96RN5 788 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 DUSP9Q99956 384 aaKnown RBP9.83□□□□□ -0.84
VPS50-207ENST00000458530 SENP6Q9GZR1 1112 aaPredicted RBP9.83□□□□□ -0.84
VPS50-207ENST00000458530 TMEM206Q9H813 350 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 CYP26B1Q9NR63 512 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.83□□□□□ -0.84
VPS50-207ENST00000458530 TBC1D7Q9P0N9 293 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 DDX20Q9UHI6 824 aaKnown RBP9.83□□□□□ -0.84
VPS50-207ENST00000458530 EXOC7Q9UPT5 735 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 TRAF3IP3Q9Y228 551 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 ZKSCAN5Q9Y2L8 839 aa9.83□□□□□ -0.84
VPS50-207ENST00000458530 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.83□□□□□ -0.84
VPS50-207ENST00000458530 MAFBQ9Y5Q3 323 aaPredicted RBP9.83□□□□□ -0.84
VPS50-207ENST00000458530 PHLPP2Q6ZVD8 1323 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 RBM47A0AV96 593 aaKnown RBP9.82□□□□□ -0.84
VPS50-207ENST00000458530 LGALS16A8MUM7 142 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 RSPH10B2B2RC85 870 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 PES1O00541 588 aaKnown RBP9.82□□□□□ -0.84
VPS50-207ENST00000458530 SLC16A3O15427 465 aaKnown RBP9.82□□□□□ -0.84
VPS50-207ENST00000458530 COBLO75128 1261 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 RSPH10BP0C881 870 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 TCF7P36402 384 aaPredicted RBP9.82□□□□□ -0.84
VPS50-207ENST00000458530 PLA2G5P39877 138 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 DNM2P50570 870 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 POLGP54098 1239 aaPredicted RBP9.82□□□□□ -0.84
VPS50-207ENST00000458530 SP2Q02086 613 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 LRRC41Q15345 812 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 MAN2A1Q16706 1144 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 CCDC40Q4G0X9 1142 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 ZCWPW2Q504Y3 356 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 HSP90AA4PQ58FG1 418 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 FAM102BQ5T8I3 360 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 UTP14CQ5TAP6 766 aaKnown RBP9.82□□□□□ -0.84
VPS50-207ENST00000458530 CCDC62Q6P9F0 684 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 ANO5Q75V66 913 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 PLPPR4Q7Z2D5 763 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 CCDC186Q7Z3E2 898 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 FILIP1Q7Z7B0 1213 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 PPFIBP1Q86W92 1011 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 CREBRFQ8IUR6 639 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 NELFCDQ8IXH7 590 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 USP38Q8NB14 1042 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 TRPV1Q8NER1 839 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 SCFD1Q8WVM8 642 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 SLC7A3Q8WY07 619 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 GLG1Q92896 1179 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 EMID1Q96A84 441 aaPredicted RBP9.82□□□□□ -0.84
VPS50-207ENST00000458530 SPATA33Q96N06 139 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 ACCSQ96QU6 501 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 TINF2Q9BSI4 451 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 ZBED2Q9BTP6 218 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 NIFKQ9BYG3 293 aaKnown RBP9.82□□□□□ -0.84
VPS50-207ENST00000458530 ST6GALNAC4Q9H4F1 302 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 SMARCAD1Q9H4L7 1026 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 METTL14Q9HCE5 456 aaKnown RBP9.82□□□□□ -0.84
VPS50-207ENST00000458530 PDLIM7Q9NR12 457 aa9.82□□□□□ -0.84
VPS50-207ENST00000458530 A0A1W2PQC6 194 aa9.81□□□□□ -0.84
VPS50-207ENST00000458530 TRIM43BA6NCK2 446 aa9.81□□□□□ -0.84
VPS50-207ENST00000458530 ESPNB1AK53 854 aa9.81□□□□□ -0.84
VPS50-207ENST00000458530 ZBTB39O15060 712 aa9.81□□□□□ -0.84
VPS50-207ENST00000458530 ZNF862O60290 1169 aa9.81□□□□□ -0.84
VPS50-207ENST00000458530 LGR5O75473 907 aa9.81□□□□□ -0.84
VPS50-207ENST00000458530 MYBP10242 640 aa9.81□□□□□ -0.84
VPS50-207ENST00000458530 EPB41P11171 864 aaKnown RBP9.81□□□□□ -0.84
VPS50-207ENST00000458530 CYBAP13498 195 aa9.81□□□□□ -0.84
VPS50-207ENST00000458530 FOSL2P15408 326 aa9.81□□□□□ -0.84
VPS50-207ENST00000458530 PTGS1P23219 599 aa9.81□□□□□ -0.84
VPS50-207ENST00000458530 PMS1P54277 932 aaKnown RBP9.81□□□□□ -0.84
VPS50-207ENST00000458530 MAPK7Q13164 816 aa9.81□□□□□ -0.84
VPS50-207ENST00000458530 MYBPC2Q14324 1141 aa9.81□□□□□ -0.84
VPS50-207ENST00000458530 NR1I3Q14994 352 aa9.81□□□□□ -0.84
VPS50-207ENST00000458530 EMC2Q15006 297 aa9.81□□□□□ -0.84
VPS50-207ENST00000458530 LY6KQ17RY6 165 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms