RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 PDE6CP51160 858 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 CASP5P51878 434 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 STAT2P52630 851 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 SEC24CP53992 1094 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 PLTPP55058 493 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 MFAP3P55082 362 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 KCNQ4P56696 695 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 RWDD2BP57060 319 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 FKBP1AP62942 108 aaKnown RBP3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 LACTBP83111 547 aaPredicted RBP3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 MAP2K1Q02750 393 aaPredicted RBP3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 LMNB2Q03252 620 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 BFSP1Q12934 665 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 PPP2R5CQ13362 524 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 CTTNQ14247 550 aaKnown RBP3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 PLS1Q14651 629 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 KIF22Q14807 665 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 TCEAL1Q15170 157 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 UAP1Q16222 522 aaPredicted RBP3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 ARHGAP44Q17R89 818 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 USH1GQ495M9 461 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 ARSHQ5FYA8 562 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 ODR4Q5SWX8 454 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 DUPD1Q68J44 220 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 RINT1Q6NUQ1 792 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 CCDC174Q6PII3 467 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 RNF207Q6ZRF8 634 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 TRMT10CQ7L0Y3 403 aaKnown RBP3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 FAM160B2Q86V87 743 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 DDX42Q86XP3 938 aaKnown RBP eCLIP3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 CLEC10AQ8IUN9 316 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 SLC9A9Q8IVB4 645 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 TPH2Q8IWU9 490 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 CCDC63Q8NA47 563 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 OR2W6PQ8NHA6 318 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 SLC30A5Q8TAD4 765 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 LNX1Q8TBB1 728 aaPredicted RBP3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 RBM46Q8TBY0 533 aaKnown RBP3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 MAGEC3Q8TD91 643 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 CHURC1Q8WUH1 139 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 RAPGEF5Q92565 580 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 KAT2BQ92831 832 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 TLCD1Q96CP7 247 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 SGSM3Q96HU1 749 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 DYDC2Q96IM9 177 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 RSRC1Q96IZ7 334 aaKnown RBP3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 SCLT1Q96NL6 688 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 C8orf37Q96NL8 207 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 ZSWIM1Q9BR11 485 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 TRIM51Q9BSJ1 452 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 TMEM109Q9BVC6 243 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 RUSC1Q9BVN2 902 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 MRIQ9BWK5 157 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 FGFBP2Q9BYJ0 223 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 TRIM7Q9C029 511 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 CCDC113Q9H0I3 377 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 AZI2Q9H6S1 392 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 SLC40A1Q9NP59 571 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 DDX4Q9NQI0 724 aaKnown RBP3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 AGPAT3Q9NRZ7 376 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 NKIRAS1Q9NYS0 192 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 LARSQ9P2J5 1176 aaKnown RBP3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 UVRAGQ9P2Y5 699 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 POLLQ9UGP5 575 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 PCYOX1Q9UHG3 505 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 DDX20Q9UHI6 824 aaKnown RBP3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 SLC12A6Q9UHW9 1150 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 VAV3Q9UKW4 847 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 PNMA2Q9UL42 364 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 NENFQ9UMX5 172 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 NFS1Q9Y697 457 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 COL2A1P02458 1487 aaPredicted RBP3.59□□□□□ -1.84
HMGN1P18-201ENST00000457642 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.58□□□□□ -1.84
HMGN1P18-201ENST00000457642 SMIM23A6NLE4 172 aa3.58□□□□□ -1.84
HMGN1P18-201ENST00000457642 CCT8L1PA6NM43 557 aa3.58□□□□□ -1.84
HMGN1P18-201ENST00000457642 RSPH10B2B2RC85 870 aa3.58□□□□□ -1.84
HMGN1P18-201ENST00000457642 F5H6K3 240 aa3.58□□□□□ -1.84
HMGN1P18-201ENST00000457642 H0YCG3 227 aa3.58□□□□□ -1.84
HMGN1P18-201ENST00000457642 O00370 1275 aa3.58□□□□□ -1.84
HMGN1P18-201ENST00000457642 KIAA0391O15091 583 aaKnown RBP3.58□□□□□ -1.84
HMGN1P18-201ENST00000457642 PMM2O15305 246 aa3.58□□□□□ -1.84
HMGN1P18-201ENST00000457642 KIF1CO43896 1103 aaKnown RBP3.58□□□□□ -1.84
HMGN1P18-201ENST00000457642 DKC1O60832 514 aaKnown RBP eCLIP3.58□□□□□ -1.84
HMGN1P18-201ENST00000457642 HIP1RO75146 1068 aa3.58□□□□□ -1.84
HMGN1P18-201ENST00000457642 ATP2C2O75185 946 aa3.58□□□□□ -1.84
HMGN1P18-201ENST00000457642 ENTPD3O75355 529 aa3.58□□□□□ -1.84
HMGN1P18-201ENST00000457642 RASSF9O75901 435 aa3.58□□□□□ -1.84
HMGN1P18-201ENST00000457642 ATP5HO75947 161 aa3.58□□□□□ -1.84
HMGN1P18-201ENST00000457642 MTA2O94776 668 aa3.58□□□□□ -1.84
HMGN1P18-201ENST00000457642 CFBP00751 764 aa3.58□□□□□ -1.84
HMGN1P18-201ENST00000457642 FTLP02792 175 aaPredicted RBP3.58□□□□□ -1.84
HMGN1P18-201ENST00000457642 RSPH10BP0C881 870 aa3.58□□□□□ -1.84
HMGN1P18-201ENST00000457642 TRIM49P0CI25 452 aa3.58□□□□□ -1.84
HMGN1P18-201ENST00000457642 TRIM49CP0CI26 452 aa3.58□□□□□ -1.84
HMGN1P18-201ENST00000457642 GZMAP12544 262 aa3.58□□□□□ -1.84
HMGN1P18-201ENST00000457642 ITGA4P13612 1032 aa3.58□□□□□ -1.84
HMGN1P18-201ENST00000457642 RARGP13631 454 aa3.58□□□□□ -1.84
HMGN1P18-201ENST00000457642 ATF2P15336 505 aa3.58□□□□□ -1.84
HMGN1P18-201ENST00000457642 CHN1P15882 459 aa3.58□□□□□ -1.84
HMGN1P18-201ENST00000457642 DRD4P21917 467 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms