RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 H0Y8X5 98 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 TOR1BO14657 336 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 SLC27A2O14975 620 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 MUSKO15146 869 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 TMCC2O75069 709 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 CELA3BP08861 270 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 DESP17661 470 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 PFKLP17858 780 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 ATF4P18848 351 aaPredicted RBP6.09□□□□□ -1.43
VPS41-209ENST00000457055 PMLP29590 882 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 HTR3AP46098 478 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 STT3AP46977 705 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 LIMS1P48059 325 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 PAPOLAP51003 745 aaKnown RBP6.09□□□□□ -1.43
VPS41-209ENST00000457055 RAB27AP51159 221 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 NEK3P51956 506 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 KRT83P78385 493 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 MRPS35P82673 323 aaKnown RBP6.09□□□□□ -1.43
VPS41-209ENST00000457055 PURAQ00577 322 aaKnown RBP6.09□□□□□ -1.43
VPS41-209ENST00000457055 SLC7A5Q01650 507 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 PFKPQ01813 784 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 MVKQ03426 396 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 TBX2Q13207 712 aaPredicted RBP6.09□□□□□ -1.43
VPS41-209ENST00000457055 MOGSQ13724 837 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 INTS3Q68E01 1043 aaKnown RBP6.09□□□□□ -1.43
VPS41-209ENST00000457055 LVRNQ6Q4G3 990 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 CYP26C1Q6V0L0 522 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 PNMA8AQ86V59 439 aaPredicted RBP6.09□□□□□ -1.43
VPS41-209ENST00000457055 CCAR2Q8N163 923 aaKnown RBP6.09□□□□□ -1.43
VPS41-209ENST00000457055 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.09□□□□□ -1.43
VPS41-209ENST00000457055 SPATA18Q8TC71 538 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 NUP133Q8WUM0 1156 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 TRIM55Q9BYV6 548 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 DNAI2Q9GZS0 605 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 ADAM7Q9H2U9 754 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 KANSL2Q9H9L4 492 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 CWC15Q9P013 229 aaKnown RBP6.09□□□□□ -1.43
VPS41-209ENST00000457055 STAP2Q9UGK3 403 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 FBXL5Q9UKA1 691 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 ZNRF3Q9ULT6 936 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 JAG2Q9Y219 1238 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.09□□□□□ -1.43
VPS41-209ENST00000457055 MORC2Q9Y6X9 1032 aaPredicted RBP6.09□□□□□ -1.43
VPS41-209ENST00000457055 ROBO1Q9Y6N7 1651 aa6.09□□□□□ -1.43
VPS41-209ENST00000457055 RNF17Q9BXT8 1623 aaKnown RBP6.09□□□□□ -1.43
VPS41-209ENST00000457055 PHLPP1O60346 1717 aa6.08□□□□□ -1.44
VPS41-209ENST00000457055 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.08□□□□□ -1.44
VPS41-209ENST00000457055 A0A1W2PQJ5 194 aa6.08□□□□□ -1.44
VPS41-209ENST00000457055 CCDC66A2RUB6 948 aa6.08□□□□□ -1.44
VPS41-209ENST00000457055 INMTO95050 263 aa6.08□□□□□ -1.44
VPS41-209ENST00000457055 AGR2O95994 175 aa6.08□□□□□ -1.44
VPS41-209ENST00000457055 IMPDH2P12268 514 aa6.08□□□□□ -1.44
VPS41-209ENST00000457055 KRT10P13645 584 aa6.08□□□□□ -1.44
VPS41-209ENST00000457055 KRT13P13646 458 aa6.08□□□□□ -1.44
VPS41-209ENST00000457055 CAPN2P17655 700 aa6.08□□□□□ -1.44
VPS41-209ENST00000457055 ATP6V1E1P36543 226 aa6.08□□□□□ -1.44
VPS41-209ENST00000457055 PMS1P54277 932 aaKnown RBP6.08□□□□□ -1.44
VPS41-209ENST00000457055 CSE1LP55060 971 aaKnown RBP6.08□□□□□ -1.44
VPS41-209ENST00000457055 RACK1P63244 317 aaKnown RBP6.08□□□□□ -1.44
VPS41-209ENST00000457055 NSUN2Q08J23 767 aaKnown RBP eCLIP6.08□□□□□ -1.44
VPS41-209ENST00000457055 MLC1Q15049 377 aa6.08□□□□□ -1.44
VPS41-209ENST00000457055 PLCB4Q15147 1175 aa6.08□□□□□ -1.44
VPS41-209ENST00000457055 RRP12Q5JTH9 1297 aaKnown RBP6.08□□□□□ -1.44
VPS41-209ENST00000457055 METTL24Q5JXM2 366 aa6.08□□□□□ -1.44
VPS41-209ENST00000457055 NOL9Q5SY16 702 aaKnown RBP6.08□□□□□ -1.44
VPS41-209ENST00000457055 DCAF15Q66K64 600 aa6.08□□□□□ -1.44
VPS41-209ENST00000457055 CYP2R1Q6VVX0 501 aa6.08□□□□□ -1.44
VPS41-209ENST00000457055 C16orf86Q6ZW13 317 aa6.08□□□□□ -1.44
VPS41-209ENST00000457055 PRRT2Q7Z6L0 340 aaPredicted RBP6.08□□□□□ -1.44
VPS41-209ENST00000457055 TRIM74Q86UV6 250 aa6.08□□□□□ -1.44
VPS41-209ENST00000457055 TRIM73Q86UV7 250 aa6.08□□□□□ -1.44
VPS41-209ENST00000457055 PPFIBP1Q86W92 1011 aa6.08□□□□□ -1.44
VPS41-209ENST00000457055 DGKHQ86XP1 1220 aa6.08□□□□□ -1.44
VPS41-209ENST00000457055 LRRC49Q8IUZ0 686 aa6.08□□□□□ -1.44
VPS41-209ENST00000457055 OR8H1Q8NGG4 311 aa6.08□□□□□ -1.44
VPS41-209ENST00000457055 TBC1D22AQ8WUA7 517 aa6.08□□□□□ -1.44
VPS41-209ENST00000457055 ATXN2LQ8WWM7 1075 aaKnown RBP6.08□□□□□ -1.44
VPS41-209ENST00000457055 RSAD2Q8WXG1 361 aa6.08□□□□□ -1.44
VPS41-209ENST00000457055 ZNF75CPQ92670 426 aaPredicted RBP6.08□□□□□ -1.44
VPS41-209ENST00000457055 ARHGEF2Q92974 986 aaKnown RBP6.08□□□□□ -1.44
VPS41-209ENST00000457055 SNX21Q969T3 373 aa6.08□□□□□ -1.44
VPS41-209ENST00000457055 NACC2Q96BF6 587 aa6.08□□□□□ -1.44
VPS41-209ENST00000457055 NOL10Q9BSC4 688 aaKnown RBP6.08□□□□□ -1.44
VPS41-209ENST00000457055 ZNF304Q9HCX3 659 aa6.08□□□□□ -1.44
VPS41-209ENST00000457055 DKK3Q9UBP4 350 aa6.08□□□□□ -1.44
VPS41-209ENST00000457055 FAM184BQ9ULE4 1060 aa6.08□□□□□ -1.44
VPS41-209ENST00000457055 LRRFIP2Q9Y608 721 aaKnown RBP6.08□□□□□ -1.44
VPS41-209ENST00000457055 SQORQ9Y6N5 450 aa6.08□□□□□ -1.44
VPS41-209ENST00000457055 AGLP35573 1532 aa6.08□□□□□ -1.44
VPS41-209ENST00000457055 NUP153P49790 1475 aaKnown RBP6.08□□□□□ -1.44
VPS41-209ENST00000457055 PLCH2O75038 1416 aa6.08□□□□□ -1.44
VPS41-209ENST00000457055 LRP6O75581 1613 aa6.07□□□□□ -1.44
VPS41-209ENST00000457055 LINC00854A0A1B0GVQ3 168 aa6.07□□□□□ -1.44
VPS41-209ENST00000457055 ZC3H12DA2A288 527 aaKnown RBP6.07□□□□□ -1.44
VPS41-209ENST00000457055 FAM221BA6H8Z2 402 aa6.07□□□□□ -1.44
VPS41-209ENST00000457055 F8VZ95 297 aa6.07□□□□□ -1.44
VPS41-209ENST00000457055 CLASP2O75122 1294 aaKnown RBP6.07□□□□□ -1.44
VPS41-209ENST00000457055 CYBBP04839 570 aa6.07□□□□□ -1.44
VPS41-209ENST00000457055 DBHP09172 617 aa6.07□□□□□ -1.44
VPS41-209ENST00000457055 HARSP12081 509 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms