RNA–Protein interactions for RNA: ENST00000455906.1

COL20A1-204, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 5

Gene COL20A1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-204ENST00000455906 MRE11P49959 708 aa20.99■□□□□ 0.95
COL20A1-204ENST00000455906 SIGLEC14Q08ET2 396 aa20.99■□□□□ 0.95
COL20A1-204ENST00000455906 PTPN21Q16825 1174 aa20.99■□□□□ 0.95
COL20A1-204ENST00000455906 CATSPER4Q7RTX7 472 aa20.99■□□□□ 0.95
COL20A1-204ENST00000455906 NEK8Q86SG6 692 aa20.99■□□□□ 0.95
COL20A1-204ENST00000455906 VPS52Q8N1B4 723 aa20.99■□□□□ 0.95
COL20A1-204ENST00000455906 BCL7CQ8WUZ0 217 aaPredicted RBP20.99■□□□□ 0.95
COL20A1-204ENST00000455906 HAS1Q92839 578 aa20.99■□□□□ 0.95
COL20A1-204ENST00000455906 ASIC4Q96FT7 647 aa20.99■□□□□ 0.95
COL20A1-204ENST00000455906 JPH2Q9BR39 696 aaPredicted RBP20.99■□□□□ 0.95
COL20A1-204ENST00000455906 NRDE2Q9H7Z3 1164 aa20.99■□□□□ 0.95
COL20A1-204ENST00000455906 MYO10Q9HD67 2058 aa20.99■□□□□ 0.95
COL20A1-204ENST00000455906 STK36Q9NRP7 1315 aa20.99■□□□□ 0.95
COL20A1-204ENST00000455906 ARID2Q68CP9 1835 aa20.99■□□□□ 0.95
COL20A1-204ENST00000455906 CCDC194A0A1B0GVG4 234 aa20.98■□□□□ 0.95
COL20A1-204ENST00000455906 DTNBO60941 627 aa20.98■□□□□ 0.95
COL20A1-204ENST00000455906 OFD1O75665 1012 aa20.98■□□□□ 0.95
COL20A1-204ENST00000455906 CXCL14O95715 111 aa20.98■□□□□ 0.95
COL20A1-204ENST00000455906 RAB27AP51159 221 aa20.98■□□□□ 0.95
COL20A1-204ENST00000455906 TPRNQ4KMQ1 711 aa20.98■□□□□ 0.95
COL20A1-204ENST00000455906 NOMO2Q5JPE7 1267 aa20.98■□□□□ 0.95
COL20A1-204ENST00000455906 IER5LQ5T953 404 aa20.98■□□□□ 0.95
COL20A1-204ENST00000455906 GLB1LQ6UWU2 654 aa20.98■□□□□ 0.95
COL20A1-204ENST00000455906 PRSS33Q8NF86 280 aa20.98■□□□□ 0.95
COL20A1-204ENST00000455906 OXER1Q8TDS5 423 aa20.98■□□□□ 0.95
COL20A1-204ENST00000455906 IGSF21Q96ID5 467 aa20.98■□□□□ 0.95
COL20A1-204ENST00000455906 ADAM7Q9H2U9 754 aa20.98■□□□□ 0.95
COL20A1-204ENST00000455906 DHX33Q9H6R0 707 aaKnown RBP20.98■□□□□ 0.95
COL20A1-204ENST00000455906 AGPAT5Q9NUQ2 364 aa20.98■□□□□ 0.95
COL20A1-204ENST00000455906 COL4A3BPQ9Y5P4 624 aa20.98■□□□□ 0.95
COL20A1-204ENST00000455906 CACNA1HO95180 2353 aa20.97■□□□□ 0.95
COL20A1-204ENST00000455906 B4GALT3O60512 393 aa20.97■□□□□ 0.95
COL20A1-204ENST00000455906 CDKL5O76039 1030 aa20.97■□□□□ 0.95
COL20A1-204ENST00000455906 P4HBP07237 508 aaKnown RBP20.97■□□□□ 0.95
COL20A1-204ENST00000455906 GALTP07902 379 aa20.97■□□□□ 0.95
COL20A1-204ENST00000455906 GCFC2P16383 781 aaKnown RBP20.97■□□□□ 0.95
COL20A1-204ENST00000455906 SP100P23497 879 aaPredicted RBP20.97■□□□□ 0.95
COL20A1-204ENST00000455906 EARS2Q5JPH6 523 aaKnown RBP20.97■□□□□ 0.95
COL20A1-204ENST00000455906 FBXL6Q8N531 539 aa20.97■□□□□ 0.95
COL20A1-204ENST00000455906 AUTS2Q8WXX7 1259 aa20.97■□□□□ 0.95
COL20A1-204ENST00000455906 SLC7A3Q8WY07 619 aa20.97■□□□□ 0.95
COL20A1-204ENST00000455906 POMKQ9H5K3 350 aa20.97■□□□□ 0.95
COL20A1-204ENST00000455906 MINDY3Q9H8M7 445 aa20.97■□□□□ 0.95
COL20A1-204ENST00000455906 DNAJB4Q9UDY4 337 aa20.97■□□□□ 0.95
COL20A1-204ENST00000455906 TPCN1Q9ULQ1 816 aa20.97■□□□□ 0.95
COL20A1-204ENST00000455906 INPP5FQ9Y2H2 1132 aa20.97■□□□□ 0.95
COL20A1-204ENST00000455906 IRAK3Q9Y616 596 aa20.97■□□□□ 0.95
COL20A1-204ENST00000455906 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.96■□□□□ 0.95
COL20A1-204ENST00000455906 TBX3O15119 743 aa20.96■□□□□ 0.95
COL20A1-204ENST00000455906 CCNT1O60563 726 aaKnown RBP20.96■□□□□ 0.95
COL20A1-204ENST00000455906 PFKFB2O60825 505 aa20.96■□□□□ 0.95
COL20A1-204ENST00000455906 DKC1O60832 514 aaKnown RBP eCLIP20.96■□□□□ 0.95
COL20A1-204ENST00000455906 CTDNEP1O95476 244 aa20.96■□□□□ 0.95
COL20A1-204ENST00000455906 CTSAP10619 480 aa20.96■□□□□ 0.95
COL20A1-204ENST00000455906 POLGP54098 1239 aaPredicted RBP20.96■□□□□ 0.95
COL20A1-204ENST00000455906 ITIH3Q06033 890 aa20.96■□□□□ 0.95
COL20A1-204ENST00000455906 SPIRE1Q08AE8 756 aa20.96■□□□□ 0.95
COL20A1-204ENST00000455906 AGMOQ6ZNB7 445 aa20.96■□□□□ 0.95
COL20A1-204ENST00000455906 PIK3AP1Q6ZUJ8 805 aa20.96■□□□□ 0.95
COL20A1-204ENST00000455906 DDX53Q86TM3 631 aaKnown RBP20.96■□□□□ 0.95
COL20A1-204ENST00000455906 PRPF31Q8WWY3 499 aaKnown RBP20.96■□□□□ 0.95
COL20A1-204ENST00000455906 TMEM143Q96AN5 459 aa20.96■□□□□ 0.95
COL20A1-204ENST00000455906 CEP170P1Q96L14 293 aa20.96■□□□□ 0.95
COL20A1-204ENST00000455906 LXNQ9BS40 222 aa20.96■□□□□ 0.95
COL20A1-204ENST00000455906 VN1R3Q9BXE9 311 aa20.96■□□□□ 0.95
COL20A1-204ENST00000455906 SLKQ9H2G2 1235 aaPredicted RBP20.96■□□□□ 0.95
COL20A1-204ENST00000455906 PPME1Q9Y570 386 aa20.96■□□□□ 0.95
COL20A1-204ENST00000455906 PCDHB2Q9Y5E7 798 aa20.96■□□□□ 0.95
COL20A1-204ENST00000455906 CARNS1A5YM72 827 aa20.95■□□□□ 0.94
COL20A1-204ENST00000455906 HOXA11P31270 313 aaPredicted RBP20.95■□□□□ 0.94
COL20A1-204ENST00000455906 CA8P35219 290 aa20.95■□□□□ 0.94
COL20A1-204ENST00000455906 SLC11A1P49279 550 aa20.95■□□□□ 0.94
COL20A1-204ENST00000455906 EPHA7Q15375 998 aa20.95■□□□□ 0.94
COL20A1-204ENST00000455906 UBXN11Q5T124 520 aa20.95■□□□□ 0.94
COL20A1-204ENST00000455906 CES5AQ6NT32 575 aa20.95■□□□□ 0.94
COL20A1-204ENST00000455906 SRGAP1Q7Z6B7 1085 aa20.95■□□□□ 0.94
COL20A1-204ENST00000455906 MRPL10Q7Z7H8 261 aaKnown RBP20.95■□□□□ 0.94
COL20A1-204ENST00000455906 ZNF280BQ86YH2 543 aa20.95■□□□□ 0.94
COL20A1-204ENST00000455906 POTEDQ86YR6 584 aa20.95■□□□□ 0.94
COL20A1-204ENST00000455906 SUGP1Q8IWZ8 645 aaKnown RBP20.95■□□□□ 0.94
COL20A1-204ENST00000455906 C4orf19Q8IY42 314 aa20.95■□□□□ 0.94
COL20A1-204ENST00000455906 NECTIN4Q96NY8 510 aa20.95■□□□□ 0.94
COL20A1-204ENST00000455906 RGL1Q9NZL6 768 aa20.95■□□□□ 0.94
COL20A1-204ENST00000455906 NR2E1Q9Y466 385 aa20.95■□□□□ 0.94
COL20A1-204ENST00000455906 MYO15AQ9UKN7 3530 aa20.94■□□□□ 0.94
COL20A1-204ENST00000455906 FAM205CA6NFA0 338 aa20.94■□□□□ 0.94
COL20A1-204ENST00000455906 C2CD4DB7Z1M9 353 aa20.94■□□□□ 0.94
COL20A1-204ENST00000455906 SRGAP2CP0DJJ0 459 aa20.94■□□□□ 0.94
COL20A1-204ENST00000455906 EPCAMP16422 314 aa20.94■□□□□ 0.94
COL20A1-204ENST00000455906 YWHABP31946 246 aaKnown RBP20.94■□□□□ 0.94
COL20A1-204ENST00000455906 RFC5P40937 340 aa20.94■□□□□ 0.94
COL20A1-204ENST00000455906 AFF1P51825 1210 aaKnown RBP20.94■□□□□ 0.94
COL20A1-204ENST00000455906 LAMTOR4Q0VGL1 99 aa20.94■□□□□ 0.94
COL20A1-204ENST00000455906 BMS1Q14692 1282 aaKnown RBP20.94■□□□□ 0.94
COL20A1-204ENST00000455906 EXOC8Q8IYI6 725 aa20.94■□□□□ 0.94
COL20A1-204ENST00000455906 C12orf76Q8N812 135 aaPredicted RBP20.94■□□□□ 0.94
COL20A1-204ENST00000455906 SLC22A17Q8WUG5 538 aa20.94■□□□□ 0.94
COL20A1-204ENST00000455906 PSPC1Q8WXF1 523 aaKnown RBP20.94■□□□□ 0.94
COL20A1-204ENST00000455906 PGBD4Q96DM1 585 aa20.94■□□□□ 0.94
COL20A1-204ENST00000455906 GBP3Q9H0R5 595 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms