RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 FAM43BQ6ZT52 329 aaPredicted RBP27.59■■■□□ 2.01
MSH2-203ENST00000454849 ABI1Q8IZP0 508 aa27.59■■■□□ 2.01
MSH2-203ENST00000454849 KLHL23Q8NBE8 558 aa27.59■■■□□ 2.01
MSH2-203ENST00000454849 MCPH1Q8NEM0 835 aa27.59■■■□□ 2.01
MSH2-203ENST00000454849 C11orf84Q9BUA3 381 aaPredicted RBP27.59■■■□□ 2.01
MSH2-203ENST00000454849 RNF216Q9NWF9 866 aaPredicted RBP27.59■■■□□ 2.01
MSH2-203ENST00000454849 MTMR6Q9Y217 621 aa27.59■■■□□ 2.01
MSH2-203ENST00000454849 CLIC4Q9Y696 253 aa27.59■■■□□ 2.01
MSH2-203ENST00000454849 C5orf67F2Z3F1 127 aa27.58■■■□□ 2.01
MSH2-203ENST00000454849 ERLIN2O94905 339 aa27.58■■■□□ 2.01
MSH2-203ENST00000454849 RB1P06400 928 aa27.58■■■□□ 2.01
MSH2-203ENST00000454849 TFF2Q03403 129 aa27.58■■■□□ 2.01
MSH2-203ENST00000454849 CEBPZQ03701 1054 aaKnown RBP27.58■■■□□ 2.01
MSH2-203ENST00000454849 GRIN1Q05586 938 aa27.58■■■□□ 2.01
MSH2-203ENST00000454849 MBTD1Q05BQ5 628 aa27.58■■■□□ 2.01
MSH2-203ENST00000454849 FOXD4L5Q5VV16 416 aaPredicted RBP27.58■■■□□ 2.01
MSH2-203ENST00000454849 FOXD4L4Q8WXT5 416 aaPredicted RBP27.58■■■□□ 2.01
MSH2-203ENST00000454849 MRPL38Q96DV4 380 aaKnown RBP27.58■■■□□ 2.01
MSH2-203ENST00000454849 TMEM117Q9H0C3 514 aa27.58■■■□□ 2.01
MSH2-203ENST00000454849 FAM105AQ9NUU6 356 aa27.58■■■□□ 2.01
MSH2-203ENST00000454849 PLAGL2Q9UPG8 496 aa27.58■■■□□ 2.01
MSH2-203ENST00000454849 DNM3Q9UQ16 869 aa27.58■■■□□ 2.01
MSH2-203ENST00000454849 RWDD3Q9Y3V2 267 aa27.58■■■□□ 2.01
MSH2-203ENST00000454849 B4GALT5O43286 388 aa27.57■■■□□ 2
MSH2-203ENST00000454849 TSPAN1O60635 241 aa27.57■■■□□ 2
MSH2-203ENST00000454849 ITGB1P05556 798 aa27.57■■■□□ 2
MSH2-203ENST00000454849 MUTP22033 750 aa27.57■■■□□ 2
MSH2-203ENST00000454849 PBX3P40426 434 aa27.57■■■□□ 2
MSH2-203ENST00000454849 PTPROQ16827 1216 aa27.57■■■□□ 2
MSH2-203ENST00000454849 UBXN11Q5T124 520 aa27.57■■■□□ 2
MSH2-203ENST00000454849 CDR2LQ86X02 465 aaPredicted RBP27.57■■■□□ 2
MSH2-203ENST00000454849 PNMA5Q96PV4 448 aa27.57■■■□□ 2
MSH2-203ENST00000454849 CWH43Q9H720 699 aa27.57■■■□□ 2
MSH2-203ENST00000454849 LMCD1Q9NZU5 365 aa27.57■■■□□ 2
MSH2-203ENST00000454849 USP20Q9Y2K6 914 aa27.57■■■□□ 2
MSH2-203ENST00000454849 PCDHB2Q9Y5E7 798 aa27.57■■■□□ 2
MSH2-203ENST00000454849 FNDC1Q4ZHG4 1894 aaPredicted RBP27.57■■■□□ 2
MSH2-203ENST00000454849 EOMESO95936 686 aa27.56■■■□□ 2
MSH2-203ENST00000454849 SSBP05455 408 aaKnown RBP eCLIP27.56■■■□□ 2
MSH2-203ENST00000454849 LIG1P18858 919 aa27.56■■■□□ 2
MSH2-203ENST00000454849 DNAJB1P25685 340 aa27.56■■■□□ 2
MSH2-203ENST00000454849 EIF2AQ9BY44 585 aaKnown RBP27.56■■■□□ 2
MSH2-203ENST00000454849 INPP5FQ9Y2H2 1132 aa27.56■■■□□ 2
MSH2-203ENST00000454849 STK24Q9Y6E0 443 aa27.56■■■□□ 2
MSH2-203ENST00000454849 HOXA2O43364 376 aa27.55■■■□□ 2
MSH2-203ENST00000454849 STX6O43752 255 aa27.55■■■□□ 2
MSH2-203ENST00000454849 EYA4O95677 639 aa27.55■■■□□ 2
MSH2-203ENST00000454849 AMHR2Q16671 573 aa27.55■■■□□ 2
MSH2-203ENST00000454849 ARL6IP4Q66PJ3 421 aaKnown RBP27.55■■■□□ 2
MSH2-203ENST00000454849 COLGALT1Q8NBJ5 622 aa27.55■■■□□ 2
MSH2-203ENST00000454849 KIFC3Q9BVG8 833 aa27.55■■■□□ 2
MSH2-203ENST00000454849 RUSC1Q9BVN2 902 aa27.55■■■□□ 2
MSH2-203ENST00000454849 PLVAPQ9BX97 442 aa27.55■■■□□ 2
MSH2-203ENST00000454849 THEGQ9P2T0 379 aa27.55■■■□□ 2
MSH2-203ENST00000454849 KIAA1671Q9BY89 1806 aa27.55■■■□□ 2
MSH2-203ENST00000454849 HSP90AA1P07900 732 aaKnown RBP27.54■■■□□ 2
MSH2-203ENST00000454849 MARCKSP29966 332 aaPredicted RBP27.54■■■□□ 2
MSH2-203ENST00000454849 RAD51AP2Q09MP3 1159 aa27.54■■■□□ 2
MSH2-203ENST00000454849 RALGAPA2Q2PPJ7 1873 aa27.54■■■□□ 2
MSH2-203ENST00000454849 TCEAL5Q5H9L2 206 aa27.54■■■□□ 2
MSH2-203ENST00000454849 IFNLR1Q8IU57 520 aaPredicted RBP27.54■■■□□ 2
MSH2-203ENST00000454849 SPPL3Q8TCT6 385 aa27.54■■■□□ 2
MSH2-203ENST00000454849 PCDHB12Q9Y5F1 795 aa27.54■■■□□ 2
MSH2-203ENST00000454849 PCDHGC5Q9Y5F6 944 aa27.54■■■□□ 2
MSH2-203ENST00000454849 ARF4P18085 180 aaPredicted RBP27.53■■■□□ 2
MSH2-203ENST00000454849 POU5F1BQ06416 359 aa27.53■■■□□ 2
MSH2-203ENST00000454849 CAMK1Q14012 370 aa27.53■■■□□ 2
MSH2-203ENST00000454849 SPECC1Q5M775 1068 aa27.53■■■□□ 2
MSH2-203ENST00000454849 CABP7Q86V35 215 aa27.53■■■□□ 2
MSH2-203ENST00000454849 TRAIPQ9BWF2 469 aa27.53■■■□□ 2
MSH2-203ENST00000454849 HES2Q9Y543 173 aa27.53■■■□□ 2
MSH2-203ENST00000454849 TTLL13PA6NNM8 815 aa27.52■■■□□ 2
MSH2-203ENST00000454849 SKIP12755 728 aa27.52■■■□□ 2
MSH2-203ENST00000454849 AFF1P51825 1210 aaKnown RBP27.52■■■□□ 2
MSH2-203ENST00000454849 THNSL1Q8IYQ7 743 aa27.52■■■□□ 2
MSH2-203ENST00000454849 POF1BQ8WVV4 589 aa27.52■■■□□ 2
MSH2-203ENST00000454849 CDK5RAP3Q96JB5 506 aa27.52■■■□□ 2
MSH2-203ENST00000454849 APOL6Q9BWW8 343 aa27.52■■■□□ 2
MSH2-203ENST00000454849 RNF39Q9H2S5 420 aa27.52■■■□□ 2
MSH2-203ENST00000454849 ZNF623O75123 536 aa27.51■■□□□ 1.99
MSH2-203ENST00000454849 HIP1RO75146 1068 aa27.51■■□□□ 1.99
MSH2-203ENST00000454849 IRS1P35568 1242 aa27.51■■□□□ 1.99
MSH2-203ENST00000454849 RAB27AP51159 221 aa27.51■■□□□ 1.99
MSH2-203ENST00000454849 NCBP1Q09161 790 aaKnown RBP27.51■■□□□ 1.99
MSH2-203ENST00000454849 PTPAQ15257 358 aa27.51■■□□□ 1.99
MSH2-203ENST00000454849 RINT1Q6NUQ1 792 aa27.51■■□□□ 1.99
MSH2-203ENST00000454849 AGMOQ6ZNB7 445 aa27.51■■□□□ 1.99
MSH2-203ENST00000454849 EP400NLQ6ZTU2 488 aa27.51■■□□□ 1.99
MSH2-203ENST00000454849 LRRC43Q8N309 656 aa27.51■■□□□ 1.99
MSH2-203ENST00000454849 SMG8Q8ND04 991 aaKnown RBP27.51■■□□□ 1.99
MSH2-203ENST00000454849 DEPTORQ8TB45 409 aa27.51■■□□□ 1.99
MSH2-203ENST00000454849 P2RX5Q93086 422 aa27.51■■□□□ 1.99
MSH2-203ENST00000454849 GBP3Q9H0R5 595 aa27.51■■□□□ 1.99
MSH2-203ENST00000454849 AAASQ9NRG9 546 aa27.51■■□□□ 1.99
MSH2-203ENST00000454849 SFI1A8K8P3 1242 aa27.5■■□□□ 1.99
MSH2-203ENST00000454849 NT5C1B-RDH14C9J2C7 533 aa27.5■■□□□ 1.99
MSH2-203ENST00000454849 OFD1O75665 1012 aa27.5■■□□□ 1.99
MSH2-203ENST00000454849 FGF18O76093 207 aa27.5■■□□□ 1.99
MSH2-203ENST00000454849 BMP15O95972 392 aa27.5■■□□□ 1.99
MSH2-203ENST00000454849 UBA7P41226 1012 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms