RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 DEPTORQ8TB45 409 aa14.85□□□□□ -0.03
CLK3-203ENST00000454830 POP1Q99575 1024 aaKnown RBP14.85□□□□□ -0.03
CLK3-203ENST00000454830 R3HDMLQ9H3Y0 253 aa14.85□□□□□ -0.03
CLK3-203ENST00000454830 AZI2Q9H6S1 392 aa14.85□□□□□ -0.03
CLK3-203ENST00000454830 SMARCAL1Q9NZC9 954 aa14.85□□□□□ -0.03
CLK3-203ENST00000454830 AIPL1Q9NZN9 384 aa14.85□□□□□ -0.03
CLK3-203ENST00000454830 SALL4Q9UJQ4 1053 aa14.85□□□□□ -0.03
CLK3-203ENST00000454830 ATP2A1O14983 1001 aa14.85□□□□□ -0.03
CLK3-203ENST00000454830 EVI5O60447 810 aa14.85□□□□□ -0.03
CLK3-203ENST00000454830 STRN3Q13033 797 aa14.85□□□□□ -0.03
CLK3-203ENST00000454830 MAPK8IP2Q13387 824 aaPredicted RBP14.85□□□□□ -0.03
CLK3-203ENST00000454830 PPP2R5AQ15172 486 aa14.85□□□□□ -0.03
CLK3-203ENST00000454830 LY6KQ17RY6 165 aa14.85□□□□□ -0.03
CLK3-203ENST00000454830 TRAPPC11Q7Z392 1133 aa14.85□□□□□ -0.03
CLK3-203ENST00000454830 ZNF526Q8TF50 670 aaPredicted RBP14.85□□□□□ -0.03
CLK3-203ENST00000454830 ZNF668Q96K58 619 aaPredicted RBP14.85□□□□□ -0.03
CLK3-203ENST00000454830 PRDM10Q9NQV6 1147 aa14.85□□□□□ -0.03
CLK3-203ENST00000454830 ANKFY1Q9P2R3 1169 aa14.85□□□□□ -0.03
CLK3-203ENST00000454830 MYPNQ86TC9 1320 aa14.85□□□□□ -0.03
CLK3-203ENST00000454830 PALMO75781 387 aa14.84□□□□□ -0.03
CLK3-203ENST00000454830 FERP16591 822 aa14.84□□□□□ -0.03
CLK3-203ENST00000454830 TNFAIP3P21580 790 aa14.84□□□□□ -0.03
CLK3-203ENST00000454830 PAFAH1B1P43034 410 aa14.84□□□□□ -0.03
CLK3-203ENST00000454830 RIOX2Q8IUF8 465 aa14.84□□□□□ -0.03
CLK3-203ENST00000454830 GLYCTKQ8IVS8 523 aa14.84□□□□□ -0.03
CLK3-203ENST00000454830 FAM84AQ96KN4 292 aa14.84□□□□□ -0.03
CLK3-203ENST00000454830 TCHPQ9BT92 498 aa14.84□□□□□ -0.03
CLK3-203ENST00000454830 GOLPH3Q9H4A6 298 aa14.84□□□□□ -0.03
CLK3-203ENST00000454830 BZW2Q9Y6E2 419 aaKnown RBP14.84□□□□□ -0.03
CLK3-203ENST00000454830 ZMYND10O75800 440 aa14.84□□□□□ -0.03
CLK3-203ENST00000454830 PPP1R37O75864 691 aa14.84□□□□□ -0.03
CLK3-203ENST00000454830 OSBPP22059 807 aa14.84□□□□□ -0.03
CLK3-203ENST00000454830 EMC2Q15006 297 aa14.84□□□□□ -0.03
CLK3-203ENST00000454830 SNRNP35Q16560 246 aaKnown RBP14.84□□□□□ -0.03
CLK3-203ENST00000454830 CCDC70Q6NSX1 233 aa14.84□□□□□ -0.03
CLK3-203ENST00000454830 RSRC2Q7L4I2 434 aaKnown RBP14.84□□□□□ -0.03
CLK3-203ENST00000454830 DNERQ8NFT8 737 aa14.84□□□□□ -0.03
CLK3-203ENST00000454830 TAF4BQ92750 862 aa14.84□□□□□ -0.03
CLK3-203ENST00000454830 MPHOSPH6Q99547 160 aaKnown RBP14.84□□□□□ -0.03
CLK3-203ENST00000454830 FAM213AQ9BRX8 229 aa14.84□□□□□ -0.03
CLK3-203ENST00000454830 PHIPQ8WWQ0 1821 aa14.84□□□□□ -0.03
CLK3-203ENST00000454830 ZSCAN20P17040 1043 aaPredicted RBP14.84□□□□□ -0.03
CLK3-203ENST00000454830 UBA1P22314 1058 aaKnown RBP14.84□□□□□ -0.03
CLK3-203ENST00000454830 GTF2BQ00403 316 aa14.84□□□□□ -0.03
CLK3-203ENST00000454830 PPP3CAQ08209 521 aa14.84□□□□□ -0.03
CLK3-203ENST00000454830 C2orf54Q08AI8 447 aa14.84□□□□□ -0.03
CLK3-203ENST00000454830 MAP1SQ66K74 1059 aaPredicted RBP14.84□□□□□ -0.03
CLK3-203ENST00000454830 LMBRD2Q68DH5 695 aaPredicted RBP14.84□□□□□ -0.03
CLK3-203ENST00000454830 TMEM161BQ8NDZ6 487 aa14.84□□□□□ -0.03
CLK3-203ENST00000454830 TIPINQ9BVW5 301 aa14.84□□□□□ -0.03
CLK3-203ENST00000454830 PLEKHA4Q9H4M7 779 aa14.84□□□□□ -0.03
CLK3-203ENST00000454830 DMAC2Q9NW81 257 aa14.84□□□□□ -0.03
CLK3-203ENST00000454830 APEX2Q9UBZ4 518 aa14.84□□□□□ -0.03
CLK3-203ENST00000454830 STAM2O75886 525 aa14.83□□□□□ -0.03
CLK3-203ENST00000454830 CYP2C8P10632 490 aa14.83□□□□□ -0.03
CLK3-203ENST00000454830 BMS1Q14692 1282 aaKnown RBP14.83□□□□□ -0.03
CLK3-203ENST00000454830 TAF3Q5VWG9 929 aa14.83□□□□□ -0.03
CLK3-203ENST00000454830 ABHD15Q6UXT9 468 aa14.83□□□□□ -0.03
CLK3-203ENST00000454830 IRF2BP2Q7Z5L9 587 aa14.83□□□□□ -0.03
CLK3-203ENST00000454830 EHD2Q9NZN4 543 aa14.83□□□□□ -0.03
CLK3-203ENST00000454830 H2AFZP0C0S5 128 aa14.83□□□□□ -0.04
CLK3-203ENST00000454830 H2AFXP16104 143 aaPredicted RBP14.83□□□□□ -0.04
CLK3-203ENST00000454830 SOX5P35711 763 aa14.83□□□□□ -0.04
CLK3-203ENST00000454830 AMPD2Q01433 879 aa14.83□□□□□ -0.04
CLK3-203ENST00000454830 H2AFVQ71UI9 128 aa14.83□□□□□ -0.04
CLK3-203ENST00000454830 COG1Q8WTW3 980 aa14.83□□□□□ -0.04
CLK3-203ENST00000454830 MMP19Q99542 508 aa14.83□□□□□ -0.04
CLK3-203ENST00000454830 TXNRD2Q9NNW7 524 aa14.83□□□□□ -0.04
CLK3-203ENST00000454830 SIX2Q9NPC8 291 aa14.83□□□□□ -0.04
CLK3-203ENST00000454830 TOPORSQ9NS56 1045 aaPredicted RBP14.83□□□□□ -0.04
CLK3-203ENST00000454830 HYOU1Q9Y4L1 999 aa14.83□□□□□ -0.04
CLK3-203ENST00000454830 SOWAHBA6NEL2 793 aa14.83□□□□□ -0.04
CLK3-203ENST00000454830 CCDC172P0C7W6 258 aa14.83□□□□□ -0.04
CLK3-203ENST00000454830 ASTE1Q2TB18 679 aaPredicted RBP14.83□□□□□ -0.04
CLK3-203ENST00000454830 GLIPR1L2Q4G1C9 344 aa14.83□□□□□ -0.04
CLK3-203ENST00000454830 TRIM50Q86XT4 487 aa14.83□□□□□ -0.04
CLK3-203ENST00000454830 SLC17A8Q8NDX2 589 aa14.83□□□□□ -0.04
CLK3-203ENST00000454830 FAM212AQ96EL1 285 aa14.83□□□□□ -0.04
CLK3-203ENST00000454830 BORCS6Q96GS4 357 aa14.83□□□□□ -0.04
CLK3-203ENST00000454830 ANO9A1A5B4 782 aa14.82□□□□□ -0.04
CLK3-203ENST00000454830 ERLIN1O75477 346 aa14.82□□□□□ -0.04
CLK3-203ENST00000454830 OATP04181 439 aa14.82□□□□□ -0.04
CLK3-203ENST00000454830 ADRB2P07550 413 aa14.82□□□□□ -0.04
CLK3-203ENST00000454830 STAT5BP51692 787 aa14.82□□□□□ -0.04
CLK3-203ENST00000454830 Q3C1V9 767 aa14.82□□□□□ -0.04
CLK3-203ENST00000454830 PROCA1Q8NCQ7 364 aaPredicted RBP14.82□□□□□ -0.04
CLK3-203ENST00000454830 FNBP1Q96RU3 617 aa14.82□□□□□ -0.04
CLK3-203ENST00000454830 COL11A1P12107 1806 aaPredicted RBP14.82□□□□□ -0.04
CLK3-203ENST00000454830 A0A0U1RQG5 324 aaPredicted RBP14.82□□□□□ -0.04
CLK3-203ENST00000454830 CXCL11O14625 94 aa14.82□□□□□ -0.04
CLK3-203ENST00000454830 MAPTP10636 758 aaKnown RBP14.82□□□□□ -0.04
CLK3-203ENST00000454830 TNNI1P19237 187 aa14.82□□□□□ -0.04
CLK3-203ENST00000454830 TNNT3P45378 269 aaPredicted RBP14.82□□□□□ -0.04
CLK3-203ENST00000454830 BIRC3Q13489 604 aa14.82□□□□□ -0.04
CLK3-203ENST00000454830 STK33Q9BYT3 514 aa14.82□□□□□ -0.04
CLK3-203ENST00000454830 NRBP2Q9NSY0 501 aa14.82□□□□□ -0.04
CLK3-203ENST00000454830 NAGPAQ9UK23 515 aa14.82□□□□□ -0.04
CLK3-203ENST00000454830 GTPBP10A4D1E9 387 aaKnown RBP14.82□□□□□ -0.04
CLK3-203ENST00000454830 SPDYE5A6NIY4 337 aa14.82□□□□□ -0.04
CLK3-203ENST00000454830 K7ERI5 159 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms