RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 FAM187BQ17R55 369 aa15.7■□□□□ 0.1
HDAC4-205ENST00000454542 FAM102BQ5T8I3 360 aa15.7■□□□□ 0.1
HDAC4-205ENST00000454542 USP49Q70CQ1 688 aa15.7■□□□□ 0.1
HDAC4-205ENST00000454542 ECHDC2Q86YB7 292 aa15.7■□□□□ 0.1
HDAC4-205ENST00000454542 SYMPKQ92797 1274 aaKnown RBP15.7■□□□□ 0.1
HDAC4-205ENST00000454542 CLP1Q92989 425 aaKnown RBP15.7■□□□□ 0.1
HDAC4-205ENST00000454542 CALML4Q96GE6 196 aa15.7■□□□□ 0.1
HDAC4-205ENST00000454542 EPSTI1Q96J88 318 aa15.7■□□□□ 0.1
HDAC4-205ENST00000454542 CDK5RAP3Q96JB5 506 aa15.7■□□□□ 0.1
HDAC4-205ENST00000454542 CLIC6Q96NY7 704 aa15.7■□□□□ 0.1
HDAC4-205ENST00000454542 CCDC113Q9H0I3 377 aa15.7■□□□□ 0.1
HDAC4-205ENST00000454542 RNF216Q9NWF9 866 aaPredicted RBP15.7■□□□□ 0.1
HDAC4-205ENST00000454542 DACT1Q9NYF0 836 aa15.7■□□□□ 0.1
HDAC4-205ENST00000454542 PIN4Q9Y237 131 aaKnown RBP15.7■□□□□ 0.1
HDAC4-205ENST00000454542 ATG2AQ2TAZ0 1938 aa15.7■□□□□ 0.1
HDAC4-205ENST00000454542 SPTLC2O15270 562 aa15.69■□□□□ 0.1
HDAC4-205ENST00000454542 PLA2G4BP0C869 781 aa15.69■□□□□ 0.1
HDAC4-205ENST00000454542 RAB27AP51159 221 aa15.69■□□□□ 0.1
HDAC4-205ENST00000454542 PPP2R5AQ15172 486 aa15.69■□□□□ 0.1
HDAC4-205ENST00000454542 STK38Q15208 465 aa15.69■□□□□ 0.1
HDAC4-205ENST00000454542 FOXD4L5Q5VV16 416 aaPredicted RBP15.69■□□□□ 0.1
HDAC4-205ENST00000454542 MAEAQ7L5Y9 396 aa15.69■□□□□ 0.1
HDAC4-205ENST00000454542 FOXD4L4Q8WXT5 416 aaPredicted RBP15.69■□□□□ 0.1
HDAC4-205ENST00000454542 MYLIPQ8WY64 445 aa15.69■□□□□ 0.1
HDAC4-205ENST00000454542 RAD54LQ92698 747 aa15.69■□□□□ 0.1
HDAC4-205ENST00000454542 KCNN1Q92952 543 aa15.69■□□□□ 0.1
HDAC4-205ENST00000454542 CCDC51Q96ER9 411 aa15.69■□□□□ 0.1
HDAC4-205ENST00000454542 PRIMPOLQ96LW4 560 aa15.69■□□□□ 0.1
HDAC4-205ENST00000454542 SAMD11Q96NU1 681 aa15.69■□□□□ 0.1
HDAC4-205ENST00000454542 TGS1Q96RS0 853 aaKnown RBP15.69■□□□□ 0.1
HDAC4-205ENST00000454542 C2orf40Q9H1Z8 148 aa15.69■□□□□ 0.1
HDAC4-205ENST00000454542 PRDM12Q9H4Q4 367 aa15.69■□□□□ 0.1
HDAC4-205ENST00000454542 MYH11P35749 1972 aa15.69■□□□□ 0.1
HDAC4-205ENST00000454542 CNTNAP2Q9UHC6 1331 aa15.68■□□□□ 0.1
HDAC4-205ENST00000454542 LRRIQ4A6NIV6 560 aa15.68■□□□□ 0.1
HDAC4-205ENST00000454542 LPXNO60711 386 aa15.68■□□□□ 0.1
HDAC4-205ENST00000454542 ZNF623O75123 536 aa15.68■□□□□ 0.1
HDAC4-205ENST00000454542 HIP1RO75146 1068 aa15.68■□□□□ 0.1
HDAC4-205ENST00000454542 AXLP30530 894 aa15.68■□□□□ 0.1
HDAC4-205ENST00000454542 GATMP50440 423 aa15.68■□□□□ 0.1
HDAC4-205ENST00000454542 ADGRE1Q14246 886 aa15.68■□□□□ 0.1
HDAC4-205ENST00000454542 ZRSR1Q15695 479 aaKnown RBP15.68■□□□□ 0.1
HDAC4-205ENST00000454542 NAALADL2Q58DX5 795 aa15.68■□□□□ 0.1
HDAC4-205ENST00000454542 UBXN11Q5T124 520 aa15.68■□□□□ 0.1
HDAC4-205ENST00000454542 DRC1Q96MC2 740 aa15.68■□□□□ 0.1
HDAC4-205ENST00000454542 C17orf80Q9BSJ5 609 aa15.68■□□□□ 0.1
HDAC4-205ENST00000454542 FZD8Q9H461 694 aa15.68■□□□□ 0.1
HDAC4-205ENST00000454542 FAM105AQ9NUU6 356 aa15.68■□□□□ 0.1
HDAC4-205ENST00000454542 ARHGAP28Q9P2N2 729 aa15.68■□□□□ 0.1
HDAC4-205ENST00000454542 STK17AQ9UEE5 414 aa15.68■□□□□ 0.1
HDAC4-205ENST00000454542 PCDHB7Q9Y5E2 793 aa15.68■□□□□ 0.1
HDAC4-205ENST00000454542 COL6A3P12111 3177 aa15.68■□□□□ 0.1
HDAC4-205ENST00000454542 EYSQ5T1H1 3165 aa15.67■□□□□ 0.1
HDAC4-205ENST00000454542 C5orf67F2Z3F1 127 aa15.67■□□□□ 0.1
HDAC4-205ENST00000454542 INO80B-WBP1J3KQ70 363 aa15.67■□□□□ 0.1
HDAC4-205ENST00000454542 HOXA2O43364 376 aa15.67■□□□□ 0.1
HDAC4-205ENST00000454542 ERLIN2O94905 339 aa15.67■□□□□ 0.1
HDAC4-205ENST00000454542 EOMESO95936 686 aa15.67■□□□□ 0.1
HDAC4-205ENST00000454542 EDN1P05305 212 aa15.67■□□□□ 0.1
HDAC4-205ENST00000454542 POU3F3P20264 500 aaPredicted RBP15.67■□□□□ 0.1
HDAC4-205ENST00000454542 ARSHQ5FYA8 562 aa15.67■□□□□ 0.1
HDAC4-205ENST00000454542 CLLU1OSQ5K130 101 aa15.67■□□□□ 0.1
HDAC4-205ENST00000454542 SPECC1Q5M775 1068 aa15.67■□□□□ 0.1
HDAC4-205ENST00000454542 AXDND1Q5T1B0 1012 aaPredicted RBP15.67■□□□□ 0.1
HDAC4-205ENST00000454542 TWF2Q6IBS0 349 aaKnown RBP15.67■□□□□ 0.1
HDAC4-205ENST00000454542 ZBTB8OSQ8IWT0 167 aa15.67■□□□□ 0.1
HDAC4-205ENST00000454542 FIBCD1Q8N539 461 aa15.67■□□□□ 0.1
HDAC4-205ENST00000454542 KCNG4Q8TDN1 519 aa15.67■□□□□ 0.1
HDAC4-205ENST00000454542 RSPH1Q8WYR4 309 aa15.67■□□□□ 0.1
HDAC4-205ENST00000454542 LARP4BQ92615 738 aaKnown RBP15.67■□□□□ 0.1
HDAC4-205ENST00000454542 PLIN2Q99541 437 aa15.67■□□□□ 0.1
HDAC4-205ENST00000454542 TMEM117Q9H0C3 514 aa15.67■□□□□ 0.1
HDAC4-205ENST00000454542 C17orf75Q9HAS0 396 aa15.67■□□□□ 0.1
HDAC4-205ENST00000454542 PRMT7Q9NVM4 692 aaPredicted RBP15.67■□□□□ 0.1
HDAC4-205ENST00000454542 TFIP11Q9UBB9 837 aaKnown RBP15.67■□□□□ 0.1
HDAC4-205ENST00000454542 LRFN2Q9ULH4 789 aa15.67■□□□□ 0.1
HDAC4-205ENST00000454542 MRPL42Q9Y6G3 142 aaKnown RBP15.67■□□□□ 0.1
HDAC4-205ENST00000454542 PHLPP2Q6ZVD8 1323 aa15.67■□□□□ 0.1
HDAC4-205ENST00000454542 ZMYM2Q9UBW7 1377 aa15.66■□□□□ 0.1
HDAC4-205ENST00000454542 A0A087X0B3 334 aa15.66■□□□□ 0.1
HDAC4-205ENST00000454542 B4GALT5O43286 388 aa15.66■□□□□ 0.1
HDAC4-205ENST00000454542 FGFR1P11362 822 aa15.66■□□□□ 0.1
HDAC4-205ENST00000454542 SKIP12755 728 aa15.66■□□□□ 0.1
HDAC4-205ENST00000454542 FOSL2P15408 326 aa15.66■□□□□ 0.1
HDAC4-205ENST00000454542 ARF4P18085 180 aaPredicted RBP15.66■□□□□ 0.1
HDAC4-205ENST00000454542 TXLNAP40222 546 aa15.66■□□□□ 0.1
HDAC4-205ENST00000454542 ZNF131P52739 623 aa15.66■□□□□ 0.1
HDAC4-205ENST00000454542 DNM1Q05193 864 aaKnown RBP15.66■□□□□ 0.1
HDAC4-205ENST00000454542 BTG3Q14201 252 aaPredicted RBP15.66■□□□□ 0.1
HDAC4-205ENST00000454542 NOTUMQ6P988 496 aa15.66■□□□□ 0.1
HDAC4-205ENST00000454542 MRPL10Q7Z7H8 261 aaKnown RBP15.66■□□□□ 0.1
HDAC4-205ENST00000454542 ARNTL2Q8WYA1 636 aa15.66■□□□□ 0.1
HDAC4-205ENST00000454542 IFT74Q96LB3 600 aa15.66■□□□□ 0.1
HDAC4-205ENST00000454542 KIFC3Q9BVG8 833 aa15.66■□□□□ 0.1
HDAC4-205ENST00000454542 ODF2LQ9ULJ1 636 aa15.66■□□□□ 0.1
HDAC4-205ENST00000454542 RWDD3Q9Y3V2 267 aa15.66■□□□□ 0.1
HDAC4-205ENST00000454542 CUTAO60888 179 aa15.65■□□□□ 0.1
HDAC4-205ENST00000454542 NPTX2P47972 431 aa15.65■□□□□ 0.1
HDAC4-205ENST00000454542 DMP1Q13316 513 aaPredicted RBP15.65■□□□□ 0.1
HDAC4-205ENST00000454542 MCM6Q14566 821 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms