RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 HCSTQ9UBK5 93 aa11.89□□□□□ -0.51
DDX39A-203ENST00000454233 CARNS1A5YM72 827 aa11.88□□□□□ -0.51
DDX39A-203ENST00000454233 USO1O60763 962 aaKnown RBP11.88□□□□□ -0.51
DDX39A-203ENST00000454233 ZNF623O75123 536 aa11.88□□□□□ -0.51
DDX39A-203ENST00000454233 SPATA31C1P0DKV0 1188 aa11.88□□□□□ -0.51
DDX39A-203ENST00000454233 U2AF2P26368 475 aaKnown RBP eCLIP11.88□□□□□ -0.514e-9■□□□□ 9.1
DDX39A-203ENST00000454233 IRS1P35568 1242 aa11.88□□□□□ -0.51
DDX39A-203ENST00000454233 KRT17Q04695 432 aa11.88□□□□□ -0.51
DDX39A-203ENST00000454233 POU5F1BQ06416 359 aa11.88□□□□□ -0.51
DDX39A-203ENST00000454233 PCBP1Q15365 356 aaKnown RBP eCLIP11.88□□□□□ -0.51
DDX39A-203ENST00000454233 HAUS3Q68CZ6 603 aa11.88□□□□□ -0.51
DDX39A-203ENST00000454233 MCTP1Q6DN14 999 aa11.88□□□□□ -0.51
DDX39A-203ENST00000454233 PDE12Q6L8Q7 609 aaKnown RBP11.88□□□□□ -0.51
DDX39A-203ENST00000454233 GLB1LQ6UWU2 654 aa11.88□□□□□ -0.51
DDX39A-203ENST00000454233 LRRC55Q6ZSA7 311 aa11.88□□□□□ -0.51
DDX39A-203ENST00000454233 CATSPER3Q86XQ3 398 aa11.88□□□□□ -0.51
DDX39A-203ENST00000454233 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.88□□□□□ -0.51
DDX39A-203ENST00000454233 NACC1Q96RE7 527 aa11.88□□□□□ -0.51
DDX39A-203ENST00000454233 POLR3CQ9BUI4 534 aaPredicted RBP11.88□□□□□ -0.51
DDX39A-203ENST00000454233 RAB34Q9BZG1 259 aa11.88□□□□□ -0.51
DDX39A-203ENST00000454233 MINDY3Q9H8M7 445 aa11.88□□□□□ -0.51
DDX39A-203ENST00000454233 SPG21Q9NZD8 308 aa11.88□□□□□ -0.51
DDX39A-203ENST00000454233 LZTS1Q9Y250 596 aa11.88□□□□□ -0.51
DDX39A-203ENST00000454233 NCOR1O75376 2440 aa11.88□□□□□ -0.51
DDX39A-203ENST00000454233 ARID2Q68CP9 1835 aa11.88□□□□□ -0.51
DDX39A-203ENST00000454233 A0A087WWV3 80 aa11.87□□□□□ -0.51
DDX39A-203ENST00000454233 FSD2A1L4K1 749 aa11.87□□□□□ -0.51
DDX39A-203ENST00000454233 GRXCR2A6NFK2 248 aa11.87□□□□□ -0.51
DDX39A-203ENST00000454233 H3BQV1 296 aa11.87□□□□□ -0.51
DDX39A-203ENST00000454233 INO80B-WBP1J3KQ70 363 aa11.87□□□□□ -0.51
DDX39A-203ENST00000454233 MED24O75448 989 aa11.87□□□□□ -0.51
DDX39A-203ENST00000454233 MUTP22033 750 aa11.87□□□□□ -0.51
DDX39A-203ENST00000454233 RPA1P27694 616 aa11.87□□□□□ -0.51
DDX39A-203ENST00000454233 AXLP30530 894 aa11.87□□□□□ -0.51
DDX39A-203ENST00000454233 ARL2P36404 184 aa11.87□□□□□ -0.51
DDX39A-203ENST00000454233 NRIP1P48552 1158 aa11.87□□□□□ -0.51
DDX39A-203ENST00000454233 ALDH7A1P49419 539 aaKnown RBP11.87□□□□□ -0.51
DDX39A-203ENST00000454233 NDUFV1P49821 464 aa11.87□□□□□ -0.51
DDX39A-203ENST00000454233 PTENP60484 403 aa11.87□□□□□ -0.51
DDX39A-203ENST00000454233 PLCB3Q01970 1234 aa11.87□□□□□ -0.51
DDX39A-203ENST00000454233 RNASELQ05823 741 aaKnown RBP11.87□□□□□ -0.51
DDX39A-203ENST00000454233 CTC1Q2NKJ3 1217 aa11.87□□□□□ -0.51
DDX39A-203ENST00000454233 LONRF3Q496Y0 759 aa11.87□□□□□ -0.51
DDX39A-203ENST00000454233 MCPH1Q8NEM0 835 aa11.87□□□□□ -0.51
DDX39A-203ENST00000454233 MRPS27Q92552 414 aaKnown RBP11.87□□□□□ -0.51
DDX39A-203ENST00000454233 LPPQ93052 612 aa11.87□□□□□ -0.51
DDX39A-203ENST00000454233 TBC1D32Q96NH3 1257 aa11.87□□□□□ -0.51
DDX39A-203ENST00000454233 POLR3FQ9H1D9 316 aaPredicted RBP11.87□□□□□ -0.51
DDX39A-203ENST00000454233 TLE6Q9H808 572 aa11.87□□□□□ -0.51
DDX39A-203ENST00000454233 LRWD1Q9UFC0 647 aa11.87□□□□□ -0.51
DDX39A-203ENST00000454233 DBR1Q9UK59 544 aaKnown RBP11.87□□□□□ -0.51
DDX39A-203ENST00000454233 INPP5FQ9Y2H2 1132 aa11.87□□□□□ -0.51
DDX39A-203ENST00000454233 PCDHB2Q9Y5E7 798 aa11.87□□□□□ -0.51
DDX39A-203ENST00000454233 STK24Q9Y6E0 443 aa11.87□□□□□ -0.51
DDX39A-203ENST00000454233 ATG2AQ2TAZ0 1938 aa11.86□□□□□ -0.51
DDX39A-203ENST00000454233 ARHGEF35A5YM69 484 aa11.86□□□□□ -0.51
DDX39A-203ENST00000454233 LAD1O00515 517 aa11.86□□□□□ -0.51
DDX39A-203ENST00000454233 IL9P15248 144 aa11.86□□□□□ -0.51
DDX39A-203ENST00000454233 GJB2P29033 226 aa11.86□□□□□ -0.51
DDX39A-203ENST00000454233 GTF2F1P35269 517 aaKnown RBP eCLIP11.86□□□□□ -0.516e-8■■■■■ 27.6
DDX39A-203ENST00000454233 CCT6AP40227 531 aaKnown RBP11.86□□□□□ -0.51
DDX39A-203ENST00000454233 PBX3P40426 434 aa11.86□□□□□ -0.51
DDX39A-203ENST00000454233 FXR2P51116 673 aaKnown RBP eCLIP11.86□□□□□ -0.51
DDX39A-203ENST00000454233 PTGDRQ13258 359 aa11.86□□□□□ -0.51
DDX39A-203ENST00000454233 ADAM15Q13444 863 aa11.86□□□□□ -0.51
DDX39A-203ENST00000454233 CAPSQ13938 189 aa11.86□□□□□ -0.51
DDX39A-203ENST00000454233 PDIA5Q14554 519 aa11.86□□□□□ -0.51
DDX39A-203ENST00000454233 NBR1Q14596 966 aa11.86□□□□□ -0.51
DDX39A-203ENST00000454233 BMS1Q14692 1282 aaKnown RBP11.86□□□□□ -0.51
DDX39A-203ENST00000454233 NOMO2Q5JPE7 1267 aa11.86□□□□□ -0.51
DDX39A-203ENST00000454233 NOTUMQ6P988 496 aa11.86□□□□□ -0.51
DDX39A-203ENST00000454233 POTEGQ6S5H5 508 aa11.86□□□□□ -0.51
DDX39A-203ENST00000454233 MAEAQ7L5Y9 396 aa11.86□□□□□ -0.51
DDX39A-203ENST00000454233 ADGRD2Q7Z7M1 963 aa11.86□□□□□ -0.51
DDX39A-203ENST00000454233 RBM23Q86U06 439 aaKnown RBP11.86□□□□□ -0.51
DDX39A-203ENST00000454233 IFNLR1Q8IU57 520 aaPredicted RBP11.86□□□□□ -0.51
DDX39A-203ENST00000454233 EFHBQ8N7U6 833 aa11.86□□□□□ -0.51
DDX39A-203ENST00000454233 CNNM3Q8NE01 707 aa11.86□□□□□ -0.51
DDX39A-203ENST00000454233 URGCPQ8TCY9 931 aa11.86□□□□□ -0.51
DDX39A-203ENST00000454233 ASAP3Q8TDY4 903 aa11.86□□□□□ -0.51
DDX39A-203ENST00000454233 CCDC51Q96ER9 411 aa11.86□□□□□ -0.51
DDX39A-203ENST00000454233 CDCA3Q99618 268 aaPredicted RBP11.86□□□□□ -0.51
DDX39A-203ENST00000454233 NGRNQ9NPE2 291 aaKnown RBP11.86□□□□□ -0.51
DDX39A-203ENST00000454233 ENTPD7Q9NQZ7 604 aa11.86□□□□□ -0.51
DDX39A-203ENST00000454233 SMC3Q9UQE7 1217 aa11.86□□□□□ -0.51
DDX39A-203ENST00000454233 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.86□□□□□ -0.51
DDX39A-203ENST00000454233 PCDHB6Q9Y5E3 794 aa11.86□□□□□ -0.51
DDX39A-203ENST00000454233 PLXNA4Q9HCM2 1894 aa11.86□□□□□ -0.51
DDX39A-203ENST00000454233 REV3LO60673 3130 aa11.86□□□□□ -0.51
DDX39A-203ENST00000454233 CNTNAP2Q9UHC6 1331 aa11.86□□□□□ -0.51
DDX39A-203ENST00000454233 LRRIQ4A6NIV6 560 aa11.85□□□□□ -0.51
DDX39A-203ENST00000454233 LINC01565O15544 149 aa11.85□□□□□ -0.51
DDX39A-203ENST00000454233 TSPAN1O60635 241 aa11.85□□□□□ -0.51
DDX39A-203ENST00000454233 ZC3H11AO75152 810 aaKnown RBP eCLIP11.85□□□□□ -0.51
DDX39A-203ENST00000454233 OFD1O75665 1012 aa11.85□□□□□ -0.51
DDX39A-203ENST00000454233 CD2BP2O95400 341 aaKnown RBP11.85□□□□□ -0.51
DDX39A-203ENST00000454233 GLRA2P23416 452 aa11.85□□□□□ -0.51
DDX39A-203ENST00000454233 HOXA11P31270 313 aaPredicted RBP11.85□□□□□ -0.51
DDX39A-203ENST00000454233 LTBRP36941 435 aa11.85□□□□□ -0.51
DDX39A-203ENST00000454233 TOB1P50616 345 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms