RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 ADAM15Q13444 863 aa18.33■□□□□ 0.52
NCKIPSD-208ENST00000454134 GNL2Q13823 731 aaKnown RBP18.33■□□□□ 0.52
NCKIPSD-208ENST00000454134 NBR1Q14596 966 aa18.33■□□□□ 0.52
NCKIPSD-208ENST00000454134 RABEP1Q15276 862 aa18.33■□□□□ 0.52
NCKIPSD-208ENST00000454134 CSPP1Q1MSJ5 1256 aa18.33■□□□□ 0.52
NCKIPSD-208ENST00000454134 TTC38Q5R3I4 469 aa18.33■□□□□ 0.52
NCKIPSD-208ENST00000454134 SRGAP1Q7Z6B7 1085 aa18.33■□□□□ 0.52
NCKIPSD-208ENST00000454134 FAM178BQ8IXR5 827 aa18.33■□□□□ 0.52
NCKIPSD-208ENST00000454134 KHSRPQ92945 711 aaKnown RBP eCLIP18.33■□□□□ 0.52
NCKIPSD-208ENST00000454134 PPP2R3CQ969Q6 453 aa18.33■□□□□ 0.52
NCKIPSD-208ENST00000454134 TRAIPQ9BWF2 469 aa18.33■□□□□ 0.52
NCKIPSD-208ENST00000454134 ASAP2O43150 1006 aa18.32■□□□□ 0.52
NCKIPSD-208ENST00000454134 OR52Z1P0C646 297 aa18.32■□□□□ 0.52
NCKIPSD-208ENST00000454134 SPATA31C1P0DKV0 1188 aa18.32■□□□□ 0.52
NCKIPSD-208ENST00000454134 NDUFV1P49821 464 aa18.32■□□□□ 0.52
NCKIPSD-208ENST00000454134 PUS10Q3MIT2 529 aaKnown RBP18.32■□□□□ 0.52
NCKIPSD-208ENST00000454134 NOSTRINQ8IVI9 506 aa18.32■□□□□ 0.52
NCKIPSD-208ENST00000454134 ASAP3Q8TDY4 903 aa18.32■□□□□ 0.52
NCKIPSD-208ENST00000454134 MRPS27Q92552 414 aaKnown RBP18.32■□□□□ 0.52
NCKIPSD-208ENST00000454134 CCDC43Q96MW1 224 aaKnown RBP18.32■□□□□ 0.52
NCKIPSD-208ENST00000454134 TLE6Q9H808 572 aa18.32■□□□□ 0.52
NCKIPSD-208ENST00000454134 INPP5FQ9Y2H2 1132 aa18.32■□□□□ 0.52
NCKIPSD-208ENST00000454134 NT5C1B-RDH14C9J2C7 533 aa18.31■□□□□ 0.52
NCKIPSD-208ENST00000454134 USO1O60763 962 aaKnown RBP18.31■□□□□ 0.52
NCKIPSD-208ENST00000454134 MED24O75448 989 aa18.31■□□□□ 0.52
NCKIPSD-208ENST00000454134 SKIP12755 728 aa18.31■□□□□ 0.52
NCKIPSD-208ENST00000454134 HOXA11P31270 313 aaPredicted RBP18.31■□□□□ 0.52
NCKIPSD-208ENST00000454134 RBM10P98175 930 aaKnown RBP18.31■□□□□ 0.52
NCKIPSD-208ENST00000454134 PLCB3Q01970 1234 aa18.31■□□□□ 0.52
NCKIPSD-208ENST00000454134 PLPP4Q5VZY2 271 aa18.31■□□□□ 0.52
NCKIPSD-208ENST00000454134 MAEAQ7L5Y9 396 aa18.31■□□□□ 0.52
NCKIPSD-208ENST00000454134 CATSPER3Q86XQ3 398 aa18.31■□□□□ 0.52
NCKIPSD-208ENST00000454134 EFHBQ8N7U6 833 aa18.31■□□□□ 0.52
NCKIPSD-208ENST00000454134 EPHX3Q9H6B9 360 aa18.31■□□□□ 0.52
NCKIPSD-208ENST00000454134 SPG21Q9NZD8 308 aa18.31■□□□□ 0.52
NCKIPSD-208ENST00000454134 PCDHB2Q9Y5E7 798 aa18.31■□□□□ 0.52
NCKIPSD-208ENST00000454134 FSCN2O14926 492 aa18.3■□□□□ 0.52
NCKIPSD-208ENST00000454134 ST18O60284 1047 aa18.3■□□□□ 0.52
NCKIPSD-208ENST00000454134 ZNF623O75123 536 aa18.3■□□□□ 0.52
NCKIPSD-208ENST00000454134 DGAT1O75907 488 aa18.3■□□□□ 0.52
NCKIPSD-208ENST00000454134 CD2BP2O95400 341 aaKnown RBP18.3■□□□□ 0.52
NCKIPSD-208ENST00000454134 GLP2RO95838 553 aa18.3■□□□□ 0.52
NCKIPSD-208ENST00000454134 SSTR3P32745 418 aaPredicted RBP18.3■□□□□ 0.52
NCKIPSD-208ENST00000454134 ARL2P36404 184 aa18.3■□□□□ 0.52
NCKIPSD-208ENST00000454134 RAB27AP51159 221 aa18.3■□□□□ 0.52
NCKIPSD-208ENST00000454134 BCAR1P56945 870 aa18.3■□□□□ 0.52
NCKIPSD-208ENST00000454134 PTENP60484 403 aa18.3■□□□□ 0.52
NCKIPSD-208ENST00000454134 CAPSQ13938 189 aa18.3■□□□□ 0.52
NCKIPSD-208ENST00000454134 MXD4Q14582 209 aaPredicted RBP18.3■□□□□ 0.52
NCKIPSD-208ENST00000454134 UBXN11Q5T124 520 aa18.3■□□□□ 0.52
NCKIPSD-208ENST00000454134 POTEGQ6S5H5 508 aa18.3■□□□□ 0.52
NCKIPSD-208ENST00000454134 GLB1LQ6UWU2 654 aa18.3■□□□□ 0.52
NCKIPSD-208ENST00000454134 GJD3Q8N144 294 aa18.3■□□□□ 0.52
NCKIPSD-208ENST00000454134 SLC39A11Q8N1S5 342 aa18.3■□□□□ 0.52
NCKIPSD-208ENST00000454134 TCF25Q9BQ70 676 aa18.3■□□□□ 0.52
NCKIPSD-208ENST00000454134 MRPL9Q9BYD2 267 aaKnown RBP18.3■□□□□ 0.52
NCKIPSD-208ENST00000454134 TUFT1Q9NNX1 390 aa18.3■□□□□ 0.52
NCKIPSD-208ENST00000454134 ENTPD7Q9NQZ7 604 aa18.3■□□□□ 0.52
NCKIPSD-208ENST00000454134 CLEC1BQ9P126 229 aa18.3■□□□□ 0.52
NCKIPSD-208ENST00000454134 PUF60Q9UHX1 559 aaKnown RBP18.3■□□□□ 0.52
NCKIPSD-208ENST00000454134 CD207Q9UJ71 328 aa18.3■□□□□ 0.52
NCKIPSD-208ENST00000454134 BARX2Q9UMQ3 279 aaPredicted RBP18.3■□□□□ 0.52
NCKIPSD-208ENST00000454134 LZTS1Q9Y250 596 aa18.3■□□□□ 0.52
NCKIPSD-208ENST00000454134 INO80B-WBP1J3KQ70 363 aa18.29■□□□□ 0.52
NCKIPSD-208ENST00000454134 MBTPS2O43462 519 aa18.29■□□□□ 0.52
NCKIPSD-208ENST00000454134 ZC3H11AO75152 810 aaKnown RBP eCLIP18.29■□□□□ 0.52
NCKIPSD-208ENST00000454134 OFD1O75665 1012 aa18.29■□□□□ 0.52
NCKIPSD-208ENST00000454134 ERLIN2O94905 339 aa18.29■□□□□ 0.52
NCKIPSD-208ENST00000454134 GLRA2P23416 452 aa18.29■□□□□ 0.52
NCKIPSD-208ENST00000454134 PPM1AP35813 382 aa18.29■□□□□ 0.52
NCKIPSD-208ENST00000454134 KRT17Q04695 432 aa18.29■□□□□ 0.52
NCKIPSD-208ENST00000454134 TFDP1Q14186 410 aa18.29■□□□□ 0.52
NCKIPSD-208ENST00000454134 NOMO2Q5JPE7 1267 aa18.29■□□□□ 0.52
NCKIPSD-208ENST00000454134 AGMOQ6ZNB7 445 aa18.29■□□□□ 0.52
NCKIPSD-208ENST00000454134 VN1R2Q8NFZ6 395 aa18.29■□□□□ 0.52
NCKIPSD-208ENST00000454134 CPB2Q96IY4 423 aa18.29■□□□□ 0.52
NCKIPSD-208ENST00000454134 MSLNLQ96KJ4 702 aa18.29■□□□□ 0.52
NCKIPSD-208ENST00000454134 POLR3FQ9H1D9 316 aaPredicted RBP18.29■□□□□ 0.52
NCKIPSD-208ENST00000454134 UPF2Q9HAU5 1272 aaKnown RBP18.29■□□□□ 0.52
NCKIPSD-208ENST00000454134 GPRC5CQ9NQ84 441 aa18.29■□□□□ 0.52
NCKIPSD-208ENST00000454134 TBC1D13Q9NVG8 400 aa18.29■□□□□ 0.52
NCKIPSD-208ENST00000454134 NOL7Q9UMY1 257 aaKnown RBP18.29■□□□□ 0.52
NCKIPSD-208ENST00000454134 FAM50BQ9Y247 325 aa18.29■□□□□ 0.52
NCKIPSD-208ENST00000454134 HIDE1A8MVS5 230 aa18.28■□□□□ 0.52
NCKIPSD-208ENST00000454134 TSPAN1O60635 241 aa18.28■□□□□ 0.52
NCKIPSD-208ENST00000454134 XRCC6P12956 609 aaKnown RBP eCLIP18.28■□□□□ 0.52
NCKIPSD-208ENST00000454134 U2AF2P26368 475 aaKnown RBP eCLIP18.28■□□□□ 0.52
NCKIPSD-208ENST00000454134 ALDH7A1P49419 539 aaKnown RBP18.28■□□□□ 0.52
NCKIPSD-208ENST00000454134 TOB1P50616 345 aaPredicted RBP18.28■□□□□ 0.52
NCKIPSD-208ENST00000454134 AFF1P51825 1210 aaKnown RBP18.28■□□□□ 0.52
NCKIPSD-208ENST00000454134 RNASELQ05823 741 aaKnown RBP18.28■□□□□ 0.52
NCKIPSD-208ENST00000454134 ORC2Q13416 577 aaPredicted RBP18.28■□□□□ 0.52
NCKIPSD-208ENST00000454134 SMAD4Q13485 552 aaKnown RBP18.28■□□□□ 0.52
NCKIPSD-208ENST00000454134 DUSP6Q16828 381 aa18.28■□□□□ 0.52
NCKIPSD-208ENST00000454134 PDE12Q6L8Q7 609 aaKnown RBP18.28■□□□□ 0.52
NCKIPSD-208ENST00000454134 TMEM173Q86WV6 379 aaPredicted RBP18.28■□□□□ 0.52
NCKIPSD-208ENST00000454134 C4orf32Q8N8J7 132 aa18.28■□□□□ 0.52
NCKIPSD-208ENST00000454134 PGBD4Q96DM1 585 aa18.28■□□□□ 0.52
NCKIPSD-208ENST00000454134 TMX3Q96JJ7 454 aa18.28■□□□□ 0.52
NCKIPSD-208ENST00000454134 POLR3CQ9BUI4 534 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms