RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 FOSBP53539 338 aa19.03■□□□□ 0.64
TNFRSF4-202ENST00000453580 SMAD4Q13485 552 aaKnown RBP19.03■□□□□ 0.64
TNFRSF4-202ENST00000453580 RABEP1Q15276 862 aa19.03■□□□□ 0.64
TNFRSF4-202ENST00000453580 FERMT3Q86UX7 667 aa19.03■□□□□ 0.64
TNFRSF4-202ENST00000453580 FBXO18Q8NFZ0 1043 aa19.03■□□□□ 0.64
TNFRSF4-202ENST00000453580 TMEM143Q96AN5 459 aa19.03■□□□□ 0.64
TNFRSF4-202ENST00000453580 TUFT1Q9NNX1 390 aa19.03■□□□□ 0.64
TNFRSF4-202ENST00000453580 UBN1Q9NPG3 1134 aa19.03■□□□□ 0.64
TNFRSF4-202ENST00000453580 KANSL3Q9P2N6 904 aa19.03■□□□□ 0.64
TNFRSF4-202ENST00000453580 WRAP73Q9P2S5 460 aaPredicted RBP19.03■□□□□ 0.64
TNFRSF4-202ENST00000453580 STK24Q9Y6E0 443 aa19.03■□□□□ 0.64
TNFRSF4-202ENST00000453580 VCANP13611 3396 aa19.03■□□□□ 0.64
TNFRSF4-202ENST00000453580 CNTNAP2Q9UHC6 1331 aa19.02■□□□□ 0.64
TNFRSF4-202ENST00000453580 CSDE1O75534 798 aaKnown RBP19.02■□□□□ 0.64
TNFRSF4-202ENST00000453580 IL9P15248 144 aa19.02■□□□□ 0.64
TNFRSF4-202ENST00000453580 DNAJB1P25685 340 aa19.02■□□□□ 0.64
TNFRSF4-202ENST00000453580 MCM7P33993 719 aa19.02■□□□□ 0.64
TNFRSF4-202ENST00000453580 LTBRP36941 435 aa19.02■□□□□ 0.64
TNFRSF4-202ENST00000453580 NRIP1P48552 1158 aa19.02■□□□□ 0.64
TNFRSF4-202ENST00000453580 C8orf34Q49A92 452 aa19.02■□□□□ 0.64
TNFRSF4-202ENST00000453580 CLLU1OSQ5K130 101 aa19.02■□□□□ 0.64
TNFRSF4-202ENST00000453580 KSR1Q8IVT5 923 aa19.02■□□□□ 0.64
TNFRSF4-202ENST00000453580 RNF149Q8NC42 400 aa19.02■□□□□ 0.64
TNFRSF4-202ENST00000453580 URGCPQ8TCY9 931 aa19.02■□□□□ 0.64
TNFRSF4-202ENST00000453580 HELQQ8TDG4 1101 aa19.02■□□□□ 0.64
TNFRSF4-202ENST00000453580 CCDC51Q96ER9 411 aa19.02■□□□□ 0.64
TNFRSF4-202ENST00000453580 ENTPD7Q9NQZ7 604 aa19.02■□□□□ 0.64
TNFRSF4-202ENST00000453580 DTNBO60941 627 aa19.01■□□□□ 0.63
TNFRSF4-202ENST00000453580 CSPG5O95196 566 aa19.01■□□□□ 0.63
TNFRSF4-202ENST00000453580 ALADP13716 330 aa19.01■□□□□ 0.63
TNFRSF4-202ENST00000453580 ATP2B1P20020 1258 aa19.01■□□□□ 0.63
TNFRSF4-202ENST00000453580 MUTP22033 750 aa19.01■□□□□ 0.63
TNFRSF4-202ENST00000453580 COASYQ13057 564 aa19.01■□□□□ 0.63
TNFRSF4-202ENST00000453580 GIT2Q14161 759 aa19.01■□□□□ 0.63
TNFRSF4-202ENST00000453580 SMAD2Q15796 467 aaKnown RBP19.01■□□□□ 0.63
TNFRSF4-202ENST00000453580 HAUS3Q68CZ6 603 aa19.01■□□□□ 0.63
TNFRSF4-202ENST00000453580 NOSTRINQ8IVI9 506 aa19.01■□□□□ 0.63
TNFRSF4-202ENST00000453580 ADHFE1Q8IWW8 467 aa19.01■□□□□ 0.63
TNFRSF4-202ENST00000453580 HACE1Q8IYU2 909 aa19.01■□□□□ 0.63
TNFRSF4-202ENST00000453580 MCPH1Q8NEM0 835 aa19.01■□□□□ 0.63
TNFRSF4-202ENST00000453580 TMEM169Q96HH4 297 aa19.01■□□□□ 0.63
TNFRSF4-202ENST00000453580 NACC1Q96RE7 527 aa19.01■□□□□ 0.63
TNFRSF4-202ENST00000453580 RAB34Q9BZG1 259 aa19.01■□□□□ 0.63
TNFRSF4-202ENST00000453580 RNF19AQ9NV58 838 aa19.01■□□□□ 0.63
TNFRSF4-202ENST00000453580 BDP1A6H8Y1 2624 aa19■□□□□ 0.63
TNFRSF4-202ENST00000453580 FSCN2O14926 492 aa19■□□□□ 0.63
TNFRSF4-202ENST00000453580 OR52Z1P0C646 297 aa19■□□□□ 0.63
TNFRSF4-202ENST00000453580 IRS1P35568 1242 aa19■□□□□ 0.63
TNFRSF4-202ENST00000453580 GUCY1B3Q02153 619 aa19■□□□□ 0.63
TNFRSF4-202ENST00000453580 RNASELQ05823 741 aaKnown RBP19■□□□□ 0.63
TNFRSF4-202ENST00000453580 ST3GAL1Q11201 340 aa19■□□□□ 0.63
TNFRSF4-202ENST00000453580 NOMO2Q5JPE7 1267 aa19■□□□□ 0.63
TNFRSF4-202ENST00000453580 LRRC55Q6ZSA7 311 aa19■□□□□ 0.63
TNFRSF4-202ENST00000453580 ZNF579Q8NAF0 562 aaKnown RBP19■□□□□ 0.63
TNFRSF4-202ENST00000453580 TCF25Q9BQ70 676 aa19■□□□□ 0.63
TNFRSF4-202ENST00000453580 POLR3CQ9BUI4 534 aaPredicted RBP19■□□□□ 0.63
TNFRSF4-202ENST00000453580 NFKBIZQ9BYH8 718 aa19■□□□□ 0.63
TNFRSF4-202ENST00000453580 PCDHB2Q9Y5E7 798 aa19■□□□□ 0.63
TNFRSF4-202ENST00000453580 MBTPS2O43462 519 aa18.99■□□□□ 0.63
TNFRSF4-202ENST00000453580 EYA4O95677 639 aa18.99■□□□□ 0.63
TNFRSF4-202ENST00000453580 ATF7P17544 494 aaPredicted RBP18.99■□□□□ 0.63
TNFRSF4-202ENST00000453580 RARRES1P49788 294 aa18.99■□□□□ 0.63
TNFRSF4-202ENST00000453580 PTENP60484 403 aa18.99■□□□□ 0.63
TNFRSF4-202ENST00000453580 SMC1AQ14683 1233 aaKnown RBP18.99■□□□□ 0.63
TNFRSF4-202ENST00000453580 TTC38Q5R3I4 469 aa18.99■□□□□ 0.63
TNFRSF4-202ENST00000453580 NOTUMQ6P988 496 aa18.99■□□□□ 0.63
TNFRSF4-202ENST00000453580 TMC7Q7Z402 723 aa18.99■□□□□ 0.63
TNFRSF4-202ENST00000453580 MRPL10Q7Z7H8 261 aaKnown RBP18.99■□□□□ 0.63
TNFRSF4-202ENST00000453580 RBM23Q86U06 439 aaKnown RBP18.99■□□□□ 0.63
TNFRSF4-202ENST00000453580 IFNLR1Q8IU57 520 aaPredicted RBP18.99■□□□□ 0.63
TNFRSF4-202ENST00000453580 SLC39A11Q8N1S5 342 aa18.99■□□□□ 0.63
TNFRSF4-202ENST00000453580 TMEM87AQ8NBN3 555 aa18.99■□□□□ 0.63
TNFRSF4-202ENST00000453580 FAM193BQ96PV7 902 aaPredicted RBP18.99■□□□□ 0.63
TNFRSF4-202ENST00000453580 DBR1Q9UK59 544 aaKnown RBP18.99■□□□□ 0.63
TNFRSF4-202ENST00000453580 REV3LO60673 3130 aa18.98■□□□□ 0.63
TNFRSF4-202ENST00000453580 LAD1O00515 517 aa18.98■□□□□ 0.63
TNFRSF4-202ENST00000453580 TBX10O75333 385 aa18.98■□□□□ 0.63
TNFRSF4-202ENST00000453580 RPA1P27694 616 aa18.98■□□□□ 0.63
TNFRSF4-202ENST00000453580 MCM2P49736 904 aa18.98■□□□□ 0.63
TNFRSF4-202ENST00000453580 BCAR1P56945 870 aa18.98■□□□□ 0.63
TNFRSF4-202ENST00000453580 DUSP6Q16828 381 aa18.98■□□□□ 0.63
TNFRSF4-202ENST00000453580 ADGRD2Q7Z7M1 963 aa18.98■□□□□ 0.63
TNFRSF4-202ENST00000453580 MSLNLQ96KJ4 702 aa18.98■□□□□ 0.63
TNFRSF4-202ENST00000453580 RSAD1Q9HA92 442 aa18.98■□□□□ 0.63
TNFRSF4-202ENST00000453580 BMP2KQ9NSY1 1161 aaPredicted RBP18.98■□□□□ 0.63
TNFRSF4-202ENST00000453580 POTEMA6NI47 508 aa18.97■□□□□ 0.63
TNFRSF4-202ENST00000453580 PI4K2BG5E9Z4 385 aa18.97■□□□□ 0.63
TNFRSF4-202ENST00000453580 INO80B-WBP1J3KQ70 363 aa18.97■□□□□ 0.63
TNFRSF4-202ENST00000453580 ZC3H11AO75152 810 aaKnown RBP eCLIP18.97■□□□□ 0.63
TNFRSF4-202ENST00000453580 NCLP19338 710 aaKnown RBP18.97■□□□□ 0.63
TNFRSF4-202ENST00000453580 GTF2F1P35269 517 aaKnown RBP eCLIP18.97■□□□□ 0.633e-7■■■■■ 29.2
TNFRSF4-202ENST00000453580 TECP42680 631 aa18.97■□□□□ 0.63
TNFRSF4-202ENST00000453580 ERVFC1P60507 584 aa18.97■□□□□ 0.63
TNFRSF4-202ENST00000453580 ZP2Q05996 745 aa18.97■□□□□ 0.63
TNFRSF4-202ENST00000453580 TMEM31Q5JXX7 168 aa18.97■□□□□ 0.63
TNFRSF4-202ENST00000453580 TMEM184AQ6ZMB5 413 aa18.97■□□□□ 0.63
TNFRSF4-202ENST00000453580 SMRP1Q8NCR6 262 aa18.97■□□□□ 0.63
TNFRSF4-202ENST00000453580 KIF2CQ99661 725 aa18.97■□□□□ 0.63
TNFRSF4-202ENST00000453580 XPNPEP1Q9NQW7 623 aa18.97■□□□□ 0.63
TNFRSF4-202ENST00000453580 TBC1D13Q9NVG8 400 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms