RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 LENG1Q96BZ8 264 aaPredicted RBP17.36■□□□□ 0.37
SNX17-204ENST00000453453 CTAGE1Q96RT6 745 aa17.36■□□□□ 0.37
SNX17-204ENST00000453453 TUT1Q9H6E5 874 aaKnown RBP17.36■□□□□ 0.37
SNX17-204ENST00000453453 TBC1D7Q9P0N9 293 aa17.36■□□□□ 0.37
SNX17-204ENST00000453453 KCNG1Q9UIX4 513 aa17.36■□□□□ 0.37
SNX17-204ENST00000453453 RWDD2AQ9UIY3 292 aa17.36■□□□□ 0.37
SNX17-204ENST00000453453 MAPK8IP1Q9UQF2 711 aa17.36■□□□□ 0.37
SNX17-204ENST00000453453 COL1A2P08123 1366 aa17.36■□□□□ 0.37
SNX17-204ENST00000453453 ITIH6Q6UXX5 1313 aa17.36■□□□□ 0.37
SNX17-204ENST00000453453 BICDL2A1A5D9 508 aa17.36■□□□□ 0.37
SNX17-204ENST00000453453 GAS2O43903 313 aaKnown RBP17.36■□□□□ 0.37
SNX17-204ENST00000453453 ZEB2O60315 1214 aa17.36■□□□□ 0.37
SNX17-204ENST00000453453 KPNA6O60684 536 aa17.36■□□□□ 0.37
SNX17-204ENST00000453453 TARBP2Q15633 366 aaKnown RBP17.36■□□□□ 0.37
SNX17-204ENST00000453453 WHAMMP3Q1A5X7 153 aa17.36■□□□□ 0.37
SNX17-204ENST00000453453 LEKR1Q6ZMV7 388 aa17.36■□□□□ 0.37
SNX17-204ENST00000453453 TOGARAM2Q6ZUX3 1019 aa17.36■□□□□ 0.37
SNX17-204ENST00000453453 C16orf70Q9BSU1 422 aa17.36■□□□□ 0.37
SNX17-204ENST00000453453 DHX33Q9H6R0 707 aaKnown RBP17.36■□□□□ 0.37
SNX17-204ENST00000453453 C17orf75Q9HAS0 396 aa17.36■□□□□ 0.37
SNX17-204ENST00000453453 ADAM21Q9UKJ8 722 aa17.36■□□□□ 0.37
SNX17-204ENST00000453453 NFE2L3Q9Y4A8 694 aa17.36■□□□□ 0.37
SNX17-204ENST00000453453 KAT6AQ92794 2004 aa17.35■□□□□ 0.37
SNX17-204ENST00000453453 SFI1A8K8P3 1242 aa17.35■□□□□ 0.37
SNX17-204ENST00000453453 MYL3P08590 195 aa17.35■□□□□ 0.37
SNX17-204ENST00000453453 C6orf222P0C671 652 aaPredicted RBP17.35■□□□□ 0.37
SNX17-204ENST00000453453 PLS3P13797 630 aa17.35■□□□□ 0.37
SNX17-204ENST00000453453 GRK4P32298 578 aa17.35■□□□□ 0.37
SNX17-204ENST00000453453 GJA9P57773 515 aa17.35■□□□□ 0.37
SNX17-204ENST00000453453 MAPK7Q13164 816 aa17.35■□□□□ 0.37
SNX17-204ENST00000453453 BEND6Q5SZJ8 279 aaPredicted RBP17.35■□□□□ 0.37
SNX17-204ENST00000453453 IFT74Q96LB3 600 aa17.35■□□□□ 0.37
SNX17-204ENST00000453453 KATNAL1Q9BW62 490 aa17.35■□□□□ 0.37
SNX17-204ENST00000453453 POLD4Q9HCU8 107 aa17.35■□□□□ 0.37
SNX17-204ENST00000453453 PCDHA2Q9Y5H9 948 aa17.35■□□□□ 0.37
SNX17-204ENST00000453453 UBE4BO95155 1302 aa17.34■□□□□ 0.37
SNX17-204ENST00000453453 MAFO75444 373 aaPredicted RBP17.34■□□□□ 0.37
SNX17-204ENST00000453453 GCNT3O95395 438 aa17.34■□□□□ 0.37
SNX17-204ENST00000453453 MAPTP10636 758 aaKnown RBP17.34■□□□□ 0.37
SNX17-204ENST00000453453 CCNE1P24864 410 aa17.34■□□□□ 0.37
SNX17-204ENST00000453453 CCND3P30281 292 aaPredicted RBP17.34■□□□□ 0.37
SNX17-204ENST00000453453 SMTNP53814 917 aa17.34■□□□□ 0.37
SNX17-204ENST00000453453 RTP1P59025 263 aa17.34■□□□□ 0.37
SNX17-204ENST00000453453 DMP1Q13316 513 aaPredicted RBP17.34■□□□□ 0.37
SNX17-204ENST00000453453 ALCAMQ13740 583 aa17.34■□□□□ 0.37
SNX17-204ENST00000453453 MAP3K21Q5TCX8 1036 aa17.34■□□□□ 0.37
SNX17-204ENST00000453453 DAW1Q8N136 415 aa17.34■□□□□ 0.37
SNX17-204ENST00000453453 FAM71BQ8TC56 605 aa17.34■□□□□ 0.37
SNX17-204ENST00000453453 TCP11Q8WWU5 503 aa17.34■□□□□ 0.37
SNX17-204ENST00000453453 P2RX5Q93086 422 aa17.34■□□□□ 0.37
SNX17-204ENST00000453453 TSG101Q99816 390 aa17.34■□□□□ 0.37
SNX17-204ENST00000453453 POLR3FQ9H1D9 316 aaPredicted RBP17.34■□□□□ 0.37
SNX17-204ENST00000453453 UPF3AQ9H1J1 476 aaKnown RBP17.34■□□□□ 0.37
SNX17-204ENST00000453453 MED4Q9NPJ6 270 aa17.34■□□□□ 0.37
SNX17-204ENST00000453453 XPNPEP3Q9NQH7 507 aa17.34■□□□□ 0.37
SNX17-204ENST00000453453 PDLIM7Q9NR12 457 aa17.34■□□□□ 0.37
SNX17-204ENST00000453453 PCDHB13Q9Y5F0 798 aa17.34■□□□□ 0.37
SNX17-204ENST00000453453 ADGRG1Q9Y653 693 aa17.34■□□□□ 0.37
SNX17-204ENST00000453453 EIF3DO15371 548 aaKnown RBP eCLIP17.33■□□□□ 0.375e-6■□□□□ 8.9
SNX17-204ENST00000453453 MSCO60682 206 aa17.33■□□□□ 0.37
SNX17-204ENST00000453453 INHAP05111 366 aa17.33■□□□□ 0.37
SNX17-204ENST00000453453 MCM3P25205 808 aa17.33■□□□□ 0.37
SNX17-204ENST00000453453 PBX1P40424 430 aa17.33■□□□□ 0.37
SNX17-204ENST00000453453 STX17P56962 302 aa17.33■□□□□ 0.37
SNX17-204ENST00000453453 PPP2R5AQ15172 486 aa17.33■□□□□ 0.37
SNX17-204ENST00000453453 LRRC41Q15345 812 aa17.33■□□□□ 0.37
SNX17-204ENST00000453453 SPATA1Q5VX52 437 aa17.33■□□□□ 0.37
SNX17-204ENST00000453453 SRLQ86TD4 932 aa17.33■□□□□ 0.37
SNX17-204ENST00000453453 GOLGA6L1Q8N7Z2 621 aa17.33■□□□□ 0.37
SNX17-204ENST00000453453 RETREG2Q8NC44 543 aa17.33■□□□□ 0.37
SNX17-204ENST00000453453 RNPEPQ9H4A4 650 aa17.33■□□□□ 0.37
SNX17-204ENST00000453453 VIPAS39Q9H9C1 493 aa17.33■□□□□ 0.37
SNX17-204ENST00000453453 GPRC5CQ9NQ84 441 aa17.33■□□□□ 0.37
SNX17-204ENST00000453453 XPNPEP1Q9NQW7 623 aa17.33■□□□□ 0.37
SNX17-204ENST00000453453 PTCH2Q9Y6C5 1203 aa17.33■□□□□ 0.37
SNX17-204ENST00000453453 H0YCG3 227 aa17.32■□□□□ 0.36
SNX17-204ENST00000453453 K7ENM7 598 aa17.32■□□□□ 0.36
SNX17-204ENST00000453453 F2P00734 622 aa17.32■□□□□ 0.36
SNX17-204ENST00000453453 INSRRP14616 1297 aa17.32■□□□□ 0.36
SNX17-204ENST00000453453 ABCD1P33897 745 aa17.32■□□□□ 0.36
SNX17-204ENST00000453453 DNM2P50570 870 aa17.32■□□□□ 0.36
SNX17-204ENST00000453453 BEX3Q00994 111 aa17.32■□□□□ 0.36
SNX17-204ENST00000453453 PPFIA1Q13136 1202 aa17.32■□□□□ 0.36
SNX17-204ENST00000453453 GNASQ5JWF2 1037 aa17.32■□□□□ 0.36
SNX17-204ENST00000453453 PPFIBP1Q86W92 1011 aa17.32■□□□□ 0.36
SNX17-204ENST00000453453 CNGA4Q8IV77 575 aa17.32■□□□□ 0.36
SNX17-204ENST00000453453 DNAJC5GQ8N7S2 189 aa17.32■□□□□ 0.36
SNX17-204ENST00000453453 CEP89Q96ST8 783 aa17.32■□□□□ 0.36
SNX17-204ENST00000453453 HMX1Q9NP08 348 aaPredicted RBP17.32■□□□□ 0.36
SNX17-204ENST00000453453 RRN3P2A6NIE6 340 aa17.32■□□□□ 0.36
SNX17-204ENST00000453453 CCDC169A6NNP5 214 aa17.32■□□□□ 0.36
SNX17-204ENST00000453453 MYO1CO00159 1063 aa17.32■□□□□ 0.36
SNX17-204ENST00000453453 MAGEB2O15479 319 aa17.32■□□□□ 0.36
SNX17-204ENST00000453453 NMT1P30419 496 aaKnown RBP17.32■□□□□ 0.36
SNX17-204ENST00000453453 PSEN2P49810 448 aa17.32■□□□□ 0.36
SNX17-204ENST00000453453 PEX3P56589 373 aa17.32■□□□□ 0.36
SNX17-204ENST00000453453 TRIM14Q14142 442 aa17.32■□□□□ 0.36
SNX17-204ENST00000453453 MFSD10Q14728 455 aa17.32■□□□□ 0.36
SNX17-204ENST00000453453 FILIP1LQ4L180 1135 aa17.32■□□□□ 0.36
SNX17-204ENST00000453453 IER5Q5VY09 327 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms