RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 P3H4Q92791 437 aa16.99■□□□□ 0.31
TRA2B-205ENST00000453386 PGM2Q96G03 612 aa16.99■□□□□ 0.31
TRA2B-205ENST00000453386 DYDC2Q96IM9 177 aa16.99■□□□□ 0.31
TRA2B-205ENST00000453386 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.99■□□□□ 0.31
TRA2B-205ENST00000453386 F5H6K3 240 aa16.98■□□□□ 0.31
TRA2B-205ENST00000453386 EXOC3O60645 756 aa16.98■□□□□ 0.31
TRA2B-205ENST00000453386 FTLP02792 175 aaPredicted RBP16.98■□□□□ 0.31
TRA2B-205ENST00000453386 VCAM1P19320 739 aa16.98■□□□□ 0.31
TRA2B-205ENST00000453386 MARCKSL1P49006 195 aa16.98■□□□□ 0.31
TRA2B-205ENST00000453386 NEDD9Q14511 834 aa16.98■□□□□ 0.31
TRA2B-205ENST00000453386 PPP1R7Q15435 360 aa16.98■□□□□ 0.31
TRA2B-205ENST00000453386 UBAP2Q5T6F2 1119 aaKnown RBP16.98■□□□□ 0.31
TRA2B-205ENST00000453386 CCDC50Q8IVM0 306 aa16.98■□□□□ 0.31
TRA2B-205ENST00000453386 LRRC34Q8IZ02 419 aa16.98■□□□□ 0.31
TRA2B-205ENST00000453386 SYCP3Q8IZU3 236 aa16.98■□□□□ 0.31
TRA2B-205ENST00000453386 HOOK2Q96ED9 719 aa16.98■□□□□ 0.31
TRA2B-205ENST00000453386 ZNF317Q96PQ6 595 aaPredicted RBP16.98■□□□□ 0.31
TRA2B-205ENST00000453386 PRMT1Q99873 361 aaKnown RBP16.98■□□□□ 0.31
TRA2B-205ENST00000453386 ELAC2Q9BQ52 826 aaKnown RBP16.98■□□□□ 0.31
TRA2B-205ENST00000453386 SYT11Q9BT88 431 aa16.98■□□□□ 0.31
TRA2B-205ENST00000453386 ZC3H12CQ9C0D7 883 aaKnown RBP16.98■□□□□ 0.31
TRA2B-205ENST00000453386 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.98■□□□□ 0.31
TRA2B-205ENST00000453386 FGFR4P22455 802 aa16.98■□□□□ 0.31
TRA2B-205ENST00000453386 MMP13P45452 471 aa16.98■□□□□ 0.31
TRA2B-205ENST00000453386 RPL21P46778 160 aaKnown RBP16.98■□□□□ 0.31
TRA2B-205ENST00000453386 PREPLQ4J6C6 727 aaPredicted RBP16.98■□□□□ 0.31
TRA2B-205ENST00000453386 PHLDB3Q6NSJ2 640 aa16.98■□□□□ 0.31
TRA2B-205ENST00000453386 C1orf186Q6ZWK4 172 aa16.98■□□□□ 0.31
TRA2B-205ENST00000453386 TEKT1Q969V4 418 aa16.98■□□□□ 0.31
TRA2B-205ENST00000453386 AGPAT1Q99943 283 aa16.98■□□□□ 0.31
TRA2B-205ENST00000453386 COA1Q9GZY4 146 aa16.98■□□□□ 0.31
TRA2B-205ENST00000453386 AGPAT3Q9NRZ7 376 aa16.98■□□□□ 0.31
TRA2B-205ENST00000453386 MTRF1LQ9UGC7 380 aaKnown RBP16.98■□□□□ 0.31
TRA2B-205ENST00000453386 PTPN22Q9Y2R2 807 aa16.98■□□□□ 0.31
TRA2B-205ENST00000453386 G3V3G9 751 aa16.98■□□□□ 0.31
TRA2B-205ENST00000453386 SLITRK3O94933 977 aa16.98■□□□□ 0.31
TRA2B-205ENST00000453386 NF2P35240 595 aa16.98■□□□□ 0.31
TRA2B-205ENST00000453386 ICA1Q05084 483 aa16.98■□□□□ 0.31
TRA2B-205ENST00000453386 MESDQ14696 234 aa16.98■□□□□ 0.31
TRA2B-205ENST00000453386 ODR4Q5SWX8 454 aa16.98■□□□□ 0.31
TRA2B-205ENST00000453386 DCAF8Q5TAQ9 597 aa16.98■□□□□ 0.31
TRA2B-205ENST00000453386 APOBEC3HQ6NTF7 200 aaKnown RBP16.98■□□□□ 0.31
TRA2B-205ENST00000453386 ZNF746Q6NUN9 644 aaPredicted RBP16.98■□□□□ 0.31
TRA2B-205ENST00000453386 HIBCHQ6NVY1 386 aaPredicted RBP16.98■□□□□ 0.31
TRA2B-205ENST00000453386 RHOT2Q8IXI1 618 aa16.98■□□□□ 0.31
TRA2B-205ENST00000453386 PRELID2Q8N945 189 aa16.98■□□□□ 0.31
TRA2B-205ENST00000453386 EPS8L3Q8TE67 593 aaKnown RBP16.98■□□□□ 0.31
TRA2B-205ENST00000453386 MKNK1Q9BUB5 465 aa16.98■□□□□ 0.31
TRA2B-205ENST00000453386 UBE2TQ9NPD8 197 aaPredicted RBP16.98■□□□□ 0.31
TRA2B-205ENST00000453386 SAMD15Q9P1V8 674 aa16.98■□□□□ 0.31
TRA2B-205ENST00000453386 PHF2O75151 1096 aa16.97■□□□□ 0.31
TRA2B-205ENST00000453386 XRCC4Q13426 336 aa16.97■□□□□ 0.31
TRA2B-205ENST00000453386 C6orf118Q5T5N4 469 aa16.97■□□□□ 0.31
TRA2B-205ENST00000453386 ZNF720Q7Z2F6 126 aa16.97■□□□□ 0.31
TRA2B-205ENST00000453386 FAM228AQ86W67 206 aa16.97■□□□□ 0.31
TRA2B-205ENST00000453386 CCDC25Q86WR0 208 aa16.97■□□□□ 0.31
TRA2B-205ENST00000453386 ATXN2LQ8WWM7 1075 aaKnown RBP16.97■□□□□ 0.31
TRA2B-205ENST00000453386 HSD17B14Q9BPX1 270 aa16.97■□□□□ 0.31
TRA2B-205ENST00000453386 ADAM7Q9H2U9 754 aa16.97■□□□□ 0.31
TRA2B-205ENST00000453386 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.97■□□□□ 0.313e-7■■■■□ 21.9
TRA2B-205ENST00000453386 GRHL1Q9NZI5 618 aa16.97■□□□□ 0.31
TRA2B-205ENST00000453386 RPTORQ8N122 1335 aa16.97■□□□□ 0.31
TRA2B-205ENST00000453386 NRAPQ86VF7 1730 aa16.97■□□□□ 0.31
TRA2B-205ENST00000453386 CHRNA3P32297 505 aa16.97■□□□□ 0.31
TRA2B-205ENST00000453386 DRG2P55039 364 aaKnown RBP16.97■□□□□ 0.31
TRA2B-205ENST00000453386 CLUL1Q15846 466 aa16.97■□□□□ 0.31
TRA2B-205ENST00000453386 CCDC137Q6PK04 289 aaKnown RBP16.97■□□□□ 0.31
TRA2B-205ENST00000453386 CCDC105Q8IYK2 499 aa16.97■□□□□ 0.31
TRA2B-205ENST00000453386 MKL1Q969V6 931 aa16.97■□□□□ 0.31
TRA2B-205ENST00000453386 NYAP2Q9P242 653 aa16.97■□□□□ 0.31
TRA2B-205ENST00000453386 ODF2LQ9ULJ1 636 aa16.97■□□□□ 0.31
TRA2B-205ENST00000453386 TRPC6Q9Y210 931 aa16.97■□□□□ 0.31
TRA2B-205ENST00000453386 SYNGAP1Q96PV0 1343 aa16.97■□□□□ 0.31
TRA2B-205ENST00000453386 UBAP1LF5GYI3 381 aa16.96■□□□□ 0.31
TRA2B-205ENST00000453386 GDF11O95390 407 aa16.96■□□□□ 0.31
TRA2B-205ENST00000453386 GHRP10912 638 aa16.96■□□□□ 0.31
TRA2B-205ENST00000453386 CIITAP33076 1130 aa16.96■□□□□ 0.31
TRA2B-205ENST00000453386 PTGIRP43119 386 aa16.96■□□□□ 0.31
TRA2B-205ENST00000453386 CCDC38Q502W7 563 aa16.96■□□□□ 0.31
TRA2B-205ENST00000453386 LRCH2Q5VUJ6 765 aa16.96■□□□□ 0.31
TRA2B-205ENST00000453386 FMNL3Q8IVF7 1028 aa16.96■□□□□ 0.31
TRA2B-205ENST00000453386 MTFR1LQ9H019 292 aa16.96■□□□□ 0.31
TRA2B-205ENST00000453386 DBR1Q9UK59 544 aaKnown RBP16.96■□□□□ 0.31
TRA2B-205ENST00000453386 SUGT1Q9Y2Z0 365 aa16.96■□□□□ 0.31
TRA2B-205ENST00000453386 FRMPD4Q14CM0 1322 aa16.96■□□□□ 0.31
TRA2B-205ENST00000453386 BCRP11274 1271 aa16.96■□□□□ 0.31
TRA2B-205ENST00000453386 LLGL1Q15334 1064 aa16.96■□□□□ 0.31
TRA2B-205ENST00000453386 SYDE2Q5VT97 1194 aa16.96■□□□□ 0.31
TRA2B-205ENST00000453386 TTC27Q6P3X3 843 aa16.96■□□□□ 0.31
TRA2B-205ENST00000453386 STXBP4Q6ZWJ1 553 aa16.96■□□□□ 0.31
TRA2B-205ENST00000453386 C8orf37Q96NL8 207 aa16.96■□□□□ 0.31
TRA2B-205ENST00000453386 BAIAP2L1Q9UHR4 511 aa16.96■□□□□ 0.31
TRA2B-205ENST00000453386 MIF4GDA9UHW6 222 aaKnown RBP16.95■□□□□ 0.3
TRA2B-205ENST00000453386 PODXLO00592 558 aa16.95■□□□□ 0.3
TRA2B-205ENST00000453386 PPIP5K2O43314 1243 aa16.95■□□□□ 0.3
TRA2B-205ENST00000453386 DNAJC8O75937 253 aaPredicted RBP16.95■□□□□ 0.3
TRA2B-205ENST00000453386 AGTP01019 485 aa16.95■□□□□ 0.3
TRA2B-205ENST00000453386 UBXN2AP68543 259 aa16.95■□□□□ 0.3
TRA2B-205ENST00000453386 ADCY2Q08462 1091 aa16.95■□□□□ 0.3
TRA2B-205ENST00000453386 BFSP1Q12934 665 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms